EY666394

Overview
NameEY666394
Unique NameEY666394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: NADB_MYCBO (L-aspartate oxidase OS=Mycobacterium bovis GN=nadB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.232e-27
Identity = 77/191 (40.31%), Postives = 108/191 (56.54%), Query Frame = 3
Query:   45 AVLCPS--DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHA-ADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVT-LLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPNCL 605
            AV+ P   DSV++H+ DT+ AGA LCD + V  +  +G   + +L+  GA  D    G   L REGGHS  RIVHA  D TG E++RAL +A      + +   H A+ +L   DG       V  L V   +    IS  + +LA+GG GH+Y +TTNP  +TGDG+A+   A   +S++EF+QFHP  L
Sbjct:   57 AVVLPDNDDSVDAHVADTLAAGAGLCDPDAVYSIVADGYRAVTDLVGAGARLDESVPGRWALTREGGHSRRRIVHAGGDATGAEVQRALQDAA---GMLDIRTGHVALRVLH--DGT-----AVTGLLVVRPDGCGIISAPSVILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQFHPTML 237          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: NADB_XYLFA (L-aspartate oxidase OS=Xylella fastidiosa GN=nadB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.608e-26
Identity = 77/187 (41.18%), Postives = 104/187 (55.61%), Query Frame = 3
Query:   51 LCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPNCLN 608
            L P D+   H+ DT+ AG  LCD      +  E  D    L   G  FD+  +G+L L  E  HS  RIVH   D +G  I +AL   V++DP+I+V E   A  +L      D V  G+   N  T E+V   S++ LLA+GG G +Y +TTNP+   G G+AMA RA AV+++MEFVQFHP  L+
Sbjct:   58 LSPDDNPSLHLADTLAAGDGLCDAVAAESIILEALDAFHVLQHFGIHFDQDSNGHLALGLEAAHSRRRIVHVGGDRSGTAIVQALTACVLNDPSITVLEGLEARHILMA----DNVVCGLLLAN-PTSEIVLPSSRI-LLATGGIGGLYDATTNPVSNFGQGIAMAARAGAVLADMEFVQFHPTALH 238          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: NADB_XYLFT (L-aspartate oxidase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=nadB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.100e-26
Identity = 77/187 (41.18%), Postives = 104/187 (55.61%), Query Frame = 3
Query:   51 LCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPNCLN 608
            L P D+   H+ DT+ AG  LCD      +  E  D    L   G  FD+  +G+L L  E  HS  RIVH   D +G  I +AL   V++DP+I+V E   A  +L      D V  G+   N  T E+V   S++ LLA+GG G +Y +TTNP+   G G+AMA RA AV+++MEFVQFHP  L+
Sbjct:   58 LSPDDNPSLHLADTLAAGDGLCDAVAAESIILEALDAFHVLQHFGIHFDQDSNGHLALGLEAAHSRRRIVHVGGDRSGTAIVQALTACVLNDPSITVLEGLEARHILMA----DNVVCGLLLAN-PTSEIVLPSSRI-LLATGGIGGLYDATTNPVNNFGQGIAMAARAGAVLADMEFVQFHPTALH 238          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: DHSA_SALTY (Succinate dehydrogenase flavoprotein subunit OS=Salmonella typhimurium GN=sdhA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 3
Query:   63 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHP 596
            D+ E HM DT+    Y+ D + +  +C  GP+ I EL  +G  F R +DG ++    GG S +       R   AAD TG  +   L +  + + + ++F   +A+DL+   DG    C     L +ET EVV F ++ T+LA+GGAG IY STTN  + TGDG+ MA RA   + +ME  QFHP
Sbjct:   63 DNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGC---TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQFHP 243          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: DHSA_ECOLI (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli (strain K12) GN=sdhA PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 3
Query:   63 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHP 596
            D+ E HM DT+    Y+ D + +  +C  GP+ I EL  +G  F R +DG ++    GG S +       R   AAD TG  +   L +  + + + ++F   +A+DL+   DG    C     L +ET EVV F ++ T+LA+GGAG IY STTN  + TGDG+ MA RA   + +ME  QFHP
Sbjct:   63 DNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGC---TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHP 243          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: DHSA_ECOL6 (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli O6 GN=sdhA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 3
Query:   63 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHP 596
            D+ E HM DT+    Y+ D + +  +C  GP+ I EL  +G  F R +DG ++    GG S +       R   AAD TG  +   L +  + + + ++F   +A+DL+   DG    C     L +ET EVV F ++ T+LA+GGAG IY STTN  + TGDG+ MA RA   + +ME  QFHP
Sbjct:   63 DNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGC---TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHP 243          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: DHSA_ECO57 (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli O157:H7 GN=sdhA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 3
Query:   63 DSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHH-------RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHP 596
            D+ E HM DT+    Y+ D + +  +C  GP+ I EL  +G  F R +DG ++    GG S +       R   AAD TG  +   L +  + + + ++F   +A+DL+   DG    C     L +ET EVV F ++ T+LA+GGAG IY STTN  + TGDG+ MA RA   + +ME  QFHP
Sbjct:   63 DNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGC---TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHP 243          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: NADB_BACSU (L-aspartate oxidase OS=Bacillus subtilis GN=nadB PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.757e-25
Identity = 73/188 (38.83%), Postives = 108/188 (57.45%), Query Frame = 3
Query:   45 AVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHA-ADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPNCL 605
            A     DS+E+H++DT+ AG    +   V  V  +G   ++ L+  G  FDR E G + L REG HS++RI HA  D TGR +   LL+ + S   I + E+  A DLL      D  C GV T + + +  VR   +V +LA+GG G+++   TN L  TGDG+++A+RA A ++++EF QFHP  L
Sbjct:   50 AAYAKDDSIEAHLEDTLYAGCGHNNLAIVADVLHDGKMMVQSLLERGFPFDRNERGGVCLGREGAHSYNRIFHAGGDATGRLLIDYLLKRINS--KIKLIENETAADLLI----EDGRCIGVMTKDSKGRLKVRHADEV-VLAAGGCGNLFLHHTNDLTVTGDGLSLAYRAGAELTDLEFTQFHPTLL 230          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: NADB_CAUCR (L-aspartate oxidase OS=Caulobacter crescentus GN=nadB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24
Identity = 72/189 (38.10%), Postives = 97/189 (51.32%), Query Frame = 3
Query:   45 AVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVH-AADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPNCLN 608
            A L   DS   H  DTI AGA LCD + V ++  EGP  +R+L A+GA FDR  D    L+ E  HS  R+     D  G  I  A++ AV + P I V E+  A  LL   +G       V  L      +V   S   +LA+GG G +Y  TT P    G+G+ +A  A A+I++ EFVQFHP  ++
Sbjct:   58 AALSGDDSPALHAADTIAAGAGLCDPQAVDLLTREGPQAVRDLAALGAPFDRKADDGFVLSLEAAHSAARVARVGGDGAGAAIMAAVIAAVRATPGIEVRENARARRLLQDANG-----RVVGVLADVDGALVEIRSTAVILATGGVGGLYAVTTTPAQVRGEGLGLAALAGAMIADPEFVQFHPTAID 241          
BLAST of EY666394 vs. ExPASy Swiss-Prot
Match: FRDA_MYCTU (Fumarate reductase flavoprotein subunit OS=Mycobacterium tuberculosis GN=frdA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.757e-24
Identity = 64/189 (33.86%), Postives = 99/189 (52.38%), Query Frame = 3
Query:   39 SGAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPNCL 605
            + AV    DS++ H  DT+  G +LCD + V     E P  + +L   G  + R  DG + +   GG    R   AAD TG  +   L + +++  ++  ++  FA  LL   DG   VC G+  + + T  +   ++   +L +GG G ++P TTN  + TGDGMA+A RA A + +MEFVQ+HP  L
Sbjct:   52 AAAVTGDDDSLDEHAHDTVSGGDWLCDQDAVEAFVAEAPKELVQLEHWGCPWSRKPDGRVAVRPFGGMKKLRTWFAADKTGFHLLHTLFQRLLTYSDVMRYDEWFATTLLVD-DG--RVC-GLVAIELATGRIETILADAVILCTGGCGRVFPFTTNANIKTGDGMALAFRAGAPLKDMEFVQYHPTGL 236          
The following BLAST results are available for this feature:
BLAST of EY666394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
NADB_MYCBO4.232e-2740.31L-aspartate oxidase OS=Mycobacterium bovis GN=nadB... [more]
NADB_XYLFA1.608e-2641.18L-aspartate oxidase OS=Xylella fastidiosa GN=nadB ... [more]
NADB_XYLFT2.100e-2641.18L-aspartate oxidase OS=Xylella fastidiosa (strain ... [more]
DHSA_SALTY4.679e-2637.84Succinate dehydrogenase flavoprotein subunit OS=Sa... [more]
DHSA_ECOLI4.679e-2637.84Succinate dehydrogenase flavoprotein subunit OS=Es... [more]
DHSA_ECOL64.679e-2637.84Succinate dehydrogenase flavoprotein subunit OS=Es... [more]
DHSA_ECO574.679e-2637.84Succinate dehydrogenase flavoprotein subunit OS=Es... [more]
NADB_BACSU6.757e-2538.83L-aspartate oxidase OS=Bacillus subtilis GN=nadB P... [more]
NADB_CAUCR2.568e-2438.10L-aspartate oxidase OS=Caulobacter crescentus GN=n... [more]
FRDA_MYCTU9.757e-2433.86Fumarate reductase flavoprotein subunit OS=Mycobac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666394 ID=EY666394; Name=EY666394; organism=Citrus sinensis; type=EST; length=886bp
GGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGTGCTGTG
CTTTGCCCTTCAGATTCTGTTGAGAGTCACATGCAGGACACAATTGTCGC
AGGGGCTTATCTATGTGATGACGAAACTGTTAGAGTTGTTTGTACAGAAG
GACCTGACAGAATAAGAGAATTGATCGCCATAGGTGCATCATTTGATCGT
GGAGAGGATGGAAACTTGCACCTAGCTAGAGAAGGGGGACACTCCCATCA
CAGAATCGTCCATGCTGCAGATATGACTGGAAGGGAGATCGAGCGGGCTC
TTTTGGAAGCTGTTGTCAGTGACCCTAATATCTCAGTGTTCGAGCATCAC
TTTGCGATAGATTTGCTAACTACTCTGGATGGTCCTGATGCAGTTTGTCA
CGGTGTTGACACTTTAAATGTTGAAACACAAGAGGTGGTACGATTCATTT
CAAAGGTGACCTTACTTGCATCAGGTGGAGCTGGGCATATTTATCCATCG
ACAACAAATCCTCTGGTGGCCACTGGAGATGGGATGGCTATGGCCCACCG
AGCTCAAGCAGTGATTTCAAACATGGAATTTGTGCAGTTCCACCCCAACT
GCCTTAACTGATGAGGGCCTTCCCTTCAAACCAAAGAAAACTCCAGAGAA
TTTCTTTTCTCATTCAACTGAAGCTGGCAGGGGTGATGGAGGCCTCCTTT
TACAATTAAGGCATGGGAACGGTTCATGCCCCTGGCTGCAGAACAAAACC
TGAACTTGCCCCCTAGGATGCGGGGGCCCAAAACACATAACCGCCCCCCC
TACAAGGGCGCCACCGACCAGGGATGGAGTCCCTTAGTATAAGTCAAGCG
GCCTGACGAAAGAAAGCACCCGCCGCCCTTTTGCCA
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