CN184315

Overview
NameCN184315
Unique NameCN184315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1
Query:   19 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 387
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1
Query:   19 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 387
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1
Query:   19 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 387
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13
Identity = 56/151 (37.09%), Postives = 69/151 (45.70%), Query Frame = 1
Query:   22 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT------AKTE-----W----------------LDGKHVVFGQVVE 393
            G + + LF D  P+T  NF        G+ K G   +Y G  FHR+IP FM Q            +SIYG  F DE   + +   G LSMANAGP TNGSQFF+        AK E     W                LD +H VFGQ+V+
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVD 436          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.424e-12
Identity = 49/125 (39.20%), Postives = 60/125 (48.00%), Query Frame = 1
Query:   22 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV 390
            G I +EL  D  P    NF  L           K  +Y+ + FHR I  FM Q            +SI+G  F DE F    KH   GI+SMAN G  TNGSQFF+     + LD KH +FG+VV
Sbjct:  285 GEINIELHTDYAPHAVYNFVQLA----------KQGYYRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDE-FCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVV 397          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.860e-12
Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 1
Query:   19 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 387
            AG I +EL++   P+   NF  LC             +Y  + FHRV+P F+ Q            ES++G  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGEIDIELWSKEAPKACRNFVQLCLEG----------YYDNTIFHRVVPEFIIQGGDPTGTGTGG-ESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.205e-11
Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 1
Query:   19 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            +G I +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 422          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.205e-11
Identity = 47/125 (37.60%), Postives = 60/125 (48.00%), Query Frame = 1
Query:   22 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            G + +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 435          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.056e-11
Identity = 45/125 (36.00%), Postives = 59/125 (47.20%), Query Frame = 1
Query:   22 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            G + +EL  +  P+   NF  L   EKG        +Y+  +FHR I  FM Q             SI+G  F DE      H+  GI+SMAN G  TN SQFF+       LD KH +F +V+E
Sbjct:  339 GPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIE 452          
BLAST of CN184315 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.056e-11
Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 1
Query:   19 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 393
            +G I +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  319 SGDINLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHVID 433          
The following BLAST results are available for this feature:
BLAST of CN184315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
SDC10_PONAB3.747e-1336.29Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA3.747e-1336.29Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN3.747e-1336.29Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
BPPI_STRP66.391e-1337.09Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
PPIL2_SCHPO1.424e-1239.20Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
SDC10_XENLA1.860e-1234.68Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPIL2_ASPOR1.205e-1138.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_ASPFU1.205e-1137.60Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_NEUCR2.056e-1136.00Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
PPIL2_EMENI2.056e-1138.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005F01_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184315 ID=CN184315; Name=CN184315; organism=Citrus sinensis; type=EST; length=521bp
ACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTGATGGAGCTCTTCGCCGA
TGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGA
AAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACTACAAAGGCTCGTCCTTC
CACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGG
AAACGGAACCGGAGGCGAATCAATCTACGGCTCGAAATTCGCCGATGAGA
ACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCC
GGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGA
GTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAAGGGATG
GACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGCAGGACCAA
CAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCAT
GATAATGATCGCCATCATCAC
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