CN184305

Overview
NameCN184305
Unique NameCN184305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length481
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184305 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.054e-17
Identity = 38/52 (73.08%), Postives = 48/52 (92.31%), Query Frame = -3
Query:  324 RNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 479
            +NND Q+ +FVESEFLGEQVEAI KI++YV+QLR +GKGHG+WHFDQMLL++
Sbjct:  200 KNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLLND 251          
BLAST of CN184305 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 2.054e-17
Identity = 40/52 (76.92%), Postives = 46/52 (88.46%), Query Frame = -3
Query:  324 RNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 479
            R NDPQ+ +F+ESEFL EQ EAINKI+KYV+QLR VGKGHG+WHFDQMLL E
Sbjct:  201 RCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLLEE 252          
BLAST of CN184305 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.874e-16
Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = -3
Query:  324 RNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 479
            RNND Q+A+FVES++L EQVEAI  I++YV+QLR VGKGHG+WHFDQMLL E
Sbjct:  203 RNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQE 254          
BLAST of CN184305 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 8.630e-16
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = -3
Query:  324 RNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG-KGHGLWHFDQMLLHE 479
            R NDPQ+ +F+ESEFL EQ EAINK++KYV+QLR VG KGHG+WHFDQMLL E
Sbjct:  198 RCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRVGNKGHGVWHFDQMLLQE 250          
BLAST of CN184305 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.630e-16
Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = -3
Query:  312 RNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 479
            R+ND  +A+F+ESEFL EQV+AI KI++YV+QLR VG+GHG+W FDQMLL+EG AA
Sbjct:  196 RSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLLNEGAAA 251          
BLAST of CN184305 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 8.630e-16
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = -3
Query:  327 RNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 479
            RNND +M  F+E E+L EQVEAI KI++YV+QLR VGKGHG+WHFDQ LLH
Sbjct:  198 RNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLLH 248          
BLAST of CN184305 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.126e-14
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = -3
Query:  330 RNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 479
            +NND  +A+F+ESEFL EQVEAI  I++YV+QLR VGKGHG WHF+QMLL
Sbjct:  208 KNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQMLL 257          
BLAST of CN184305 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.126e-14
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = -3
Query:  330 RNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 479
            +N+D Q+A+F+ES FL EQVEAI KI++YVSQLR +GKGHG WHFDQ LL
Sbjct:  206 KNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHGTWHFDQELL 255          
The following BLAST results are available for this feature:
BLAST of CN184305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
FRI2_ARATH2.054e-1773.08Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_MAIZE2.054e-1776.92Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI2_TOBAC3.874e-1673.08Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_MAIZE8.630e-1673.58Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI1_TOBAC8.630e-1667.86Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI1_PEA8.630e-1670.59Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI4_ARATH2.126e-1470.00Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH2.126e-1470.00Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005E20_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005E20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184305 ID=CN184305; Name=CN184305; organism=Citrus sinensis; type=EST; length=481bp
TTTTATTGAACAACTTAATTATATTTATACAATCAGAAGATGGATTTGGT
GCTCTGCTTAAACTATTAGATCCCTTCACACAGTCTGTTACTAAATAAAG
AAAAAGCACCATCAAAAAGACTATCTAAATGCGACCACACTAATATGATA
AAGCAAGGAGGCTATTGAGTATTAACTTTGTAGGACTTAACACTGTTTCA
GCTTATTTTTTGTCAACACACTCAACCTCCTGTGGCAGAGATACTTCAGA
ACATTTGGCAGAAAAGAGTTGACTAAAGCACAAAGAAATGTAACAATATG
GTTCTTCATCATGCAGCATCACCCTCGTGGAGAAGCATTTGATCGAAGTG
CCATAATCCGTGGCCTTTCCCAACCATCCTCAGTTGAGAAACATATTTTG
CGATCTTGTTAATTGCTTCAACCTGCTCACCCAAAAATTCACTCTCGACA
AACTCTGCCATTTGGGGATCATTGTTTCTAT
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