EY666391

Overview
NameEY666391
Unique NameEY666391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_SYNJA (Trigger factor OS=Synechococcus sp. (strain JA-3-3Ab) GN=tig PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15
Identity = 48/187 (25.67%), Postives = 98/187 (52.41%), Query Frame = 1
Query:   40 VTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQL--LQMQAGMKLNE 594
            V DR  Q+GD+ ++D  A   + +      + +   + F  + ++ +  +PGF+  + G+Q  +TK     FP+ + ++ L G    FTV  +E+  ++LP+LDD+   + +    T+ +++E L ++  +      ++  + AIL+ + +  E+D+P++L E++  QL    L  LQ Q G+   E
Sbjct:  161 VEDRPAQLGDVVVIDFQARDAEGNP-----LEEIAAQDFQLELKE-ENFIPGFVAGVVGMQLDQTKEITATFPDDYFRKELAGKTVTFTVCLKEIKTKELPELDDAFVQE-ISEFQTVAELREHLQKRLEQDALRQSEENLETAILNAILETTEVDLPETLVEQETTQLLARSLQSLQQQQGVTPGE 340          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_PROM1 (Trigger factor OS=Prochlorococcus marinus (strain NATL1A) GN=tig PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15
Identity = 46/165 (27.88%), Postives = 86/165 (52.12%), Query Frame = 1
Query:   40 VTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 534
            VTDR  Q GDIA+V    +  D+       I          + E G +++PGF++ + G+   + K  +  FP+ + QE  +G +A+F V   +L  ++LP+L+D  A K       +  ++  L ++ +E     + +   +++LD L K +E+DIP+SL +++
Sbjct:  166 VTDRAAQKGDIALVSFKGSFSDDGSE----IEGGSADSIEIELEQG-RMIPGFIEGVIGMNINDEKILKCEFPKDYHQEEAKGRKAEFNVSLEDLKIKELPELNDEFA-KQASDKENMSDLRADLEKRLKEDNDRKQAKTRQDSLLDVLVKELEVDIPKSLIDQE 324          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_GEOTN (Trigger factor OS=Geobacillus thermodenitrificans (strain NG80-2) GN=tig PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15
Identity = 56/199 (28.14%), Postives = 96/199 (48.24%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKV-LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGA--QLLQMQAGMKL 588
            L+R  ++   L +  +  ++ GD A++D         E  V   P    K  ++  E G    +PGF D + G++ GE K  ++ FPE +  E L G  A F V+  E+  + LP LDD  A  +     T++++K  +  +  E ++   + A  NA++++     EIDIP  + + +  ++     Q LQMQ GM L
Sbjct:  142 LKRLQENYAELVVKEEGTVENGDTAVIDF--------EGFVDGEPFEGGKAENYSLEIGSGTFIPGFEDQLVGMKAGEEKEIQVTFPEEYHAEQLAGKPATFKVKVHEVKAKQLPALDDEFAKDVDEEVETLDELKSKIRTRLEEAKKNEAEAAVRNAVVEKAAANAEIDIPAVMVQNETDRMLREFDQRLQMQ-GMNL 331          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_SYNY3 (Trigger factor OS=Synechocystis sp. (strain PCC 6803) GN=tig PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.717e-15
Identity = 56/204 (27.45%), Postives = 104/204 (50.98%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDN---AILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQMQAGMKLNEQQL 603
            L+   +   +L  V DR   +GD+AIVD +A  + ED    + I + +   F    EDG + + G +D I G+   ETK   + FPE +  E + G    F ++ +E+ +R+LP+LDD  A  +    +  E + E      ++ ++ AK +  DN   AI  +L ++   D+P+++ +++  +L     ++++  M L+  QL
Sbjct:  150 LKGEQEKRATLVPVEDRPAALGDLAIVDYAAFQVAEDGQAGEAIAEVKGSDFEVTLEDG-RFVAGIVDGIVGMAVDETKLIPVTFPEDYPLEAVAGEDVLFEIKLKEIKFRELPELDDDFAEDV----SEFETMAELKADLEKQFQEQAKQRTDDNIKAAIKKKLGELFTGDLPETMIKQECDRLVAQTAMELER-MGLDVSQL 347          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_PROMT (Trigger factor OS=Prochlorococcus marinus (strain NATL2A) GN=tig PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15
Identity = 44/165 (26.67%), Postives = 87/165 (52.73%), Query Frame = 1
Query:   40 VTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 534
            V+DR  Q GDIA+V    +  D+       I          + E G +++PGF++ + G+   + K+ +  FP+ + QE  +G +A+F V   +L  ++LP+L+D  A K       +  ++  L ++ +E     + +   +++LD L K +E+D+P+SL +++
Sbjct:  166 VSDRAAQKGDIALVSFKGSFSDDGSE----IEGGSADSIEIELEQG-RMIPGFIEGVIGMNINDEKTLKCEFPKDYHQEEAKGRKAEFNVSLEDLKIKELPELNDEFA-KQASDKENMSDLRADLEKRLKEDNDRKQAKTRQDSLLDVLVKELEVDLPKSLIDQE 324          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_SYNS3 (Trigger factor OS=Synechococcus sp. (strain CC9311) GN=tig PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15
Identity = 58/202 (28.71%), Postives = 101/202 (50.00%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQA----TDN---AILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQM-QAGM 582
            L +  + L ++  V  R    GDIA+V    T  D+       I    ++    D E G +++PGF++ + G+  G++K+    FPE + +E  RG +A F +E ++L  R+LP LDD  A +           +ETL +   ++E+  KD A    T N   A+L  L + +E+++P++L +++ + L      Q  Q GM
Sbjct:  153 LEQSRRQLATVVPVEGRKAAQGDIAVVGFKGTYSDDGSE----IEGGSSESMDVDLEHG-RMIPGFIEGVVGMTVGDSKTVACNFPEDYPKEDARGRKASFEIELKDLKTRELPDLDDDFAKQ--------ASEQETLAELRTDLEKRLKDDAERRTTSNRRDALLAALVEQLEVELPETLVQQEVRNLVEQTAAQFSQQGM 341          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_PROM4 (Trigger factor OS=Prochlorococcus marinus (strain MIT 9211) GN=tig PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.051e-14
Identity = 51/182 (28.02%), Postives = 93/182 (51.10%), Query Frame = 1
Query:    1 LRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQL 546
            + +  K L +L  V +R  + GD+A+V       D    N   I    +     + E G +++PGF++ I G+   + K+    FP+ + QE  R  +A+F ++ ++L  R+LPKLDD  A K      ++E++++ L  K +E       +    A+L  L + +EID+P++L E + + L
Sbjct:  153 IEQSRKQLSTLIPVENRPAKKGDVAVVSFEGKFTD----NNSPIEGGNSDSMDIELEKG-QMIPGFVEGIIGMNINDEKTVECTFPKDYPQEDARNRKAKFDIKVKDLKTRELPKLDDDFA-KQASDKDSLEELRKELEAKLKEDAHQRSIKNRQEALLKALVEQLEIDLPKTLIEIETRNL 328          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_AKKM8 (Trigger factor OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=tig PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.373e-14
Identity = 48/181 (26.52%), Postives = 93/181 (51.38%), Query Frame = 1
Query:   46 DRGLQVGDIAIVDISATTIDEDESNVQNIPDA--ETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQMQAGM 582
            DR  Q  D+AI+D   T   +  +     P    E +   +   + D+ LPGF  ++ G+  G++K   +  P+++    LRG +  F    +E+  + LP +DD+ A K+LPG   +E++K  L +   + +    D+A  + I ++L  M++ ++P+++ E   +++YG    +MQ  M
Sbjct:  155 DRAAQKDDVAIIDFKTTLDGKPVAEAVGKPVGFLEGRDGQWMKVEDDQFLPGFASALEGLNAGDSKDITVTIPDTFPITELRGKELVFHATVKEVREKQLPAMDDAFAEKVLPG-KNLEELKTALKENLAQRKAMQIDEAKADQITEKLADMLDFNLPEAVVE---REVYGILQQKMQQAM 331          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_ANATD (Trigger factor OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tig PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 50/167 (29.94%), Postives = 91/167 (54.49%), Query Frame = 1
Query:   37 IVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV-EQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 534
            +  +R ++ GDI  +D     +D +  N  +  D E       T   +  +PGF + + G+ +GE K   + FPE +++  L G +A F V+ +++  ++LP+LDD  A K +    T+E++K  +  + RE  ++ AKD+  D AIL+++ +   IDIP+ + E Q
Sbjct:  153 VPVERPVENGDIVTIDFEGF-VDGEPINGGSAKDYEL------TIGSNTFIPGFEEQLIGMNKGEEKEIEVTFPEDYQEPSLAGKKATFKVKVKDIKVKELPELDDEFA-KDVSEFETLEELKANIRNRIREKNDKRAKDEMID-AILEKIAQNTSIDIPEPMIENQ 310          
BLAST of EY666391 vs. ExPASy Swiss-Prot
Match: TIG_STAHJ (Trigger factor OS=Staphylococcus haemolyticus (strain JCSC1435) GN=tig PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.341e-14
Identity = 54/206 (26.21%), Postives = 99/206 (48.06%), Query Frame = 1
Query:   22 LGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLL-----QKCREVEQTAKDQ----ATDNAILDQLYKMVEIDIPQSLFEEQGKQLYGAQLLQMQAGMKLNEQQLAAL 612
            L  + +  D  ++ GD   +D       E           +  G+  +   G   +PGF D + G++ GE K   + FPE +  E L G +A F  +  E+ Y+++P+LDD +A +L     ++++ KE L      QK  E E   K++    ATDNA +D    M++ ++ + + +E G+++   Q L +Q   +++ Q  + L
Sbjct:  149 LADMVVKEDGAVENGDTVNIDFDGYVDGEQ------FEGGQADGYDLEIGSGS-FIPGFEDQLVGVKTGEEKDVVVTFPEEYHAEELAGKKATFKTKVNEIKYKEVPELDDEIANELDSDANSVDEYKENLRKRLSEQKAEEAENVEKEEAINKATDNATIDIPQAMIDTELDR-MVQEFGQRIQ-QQGLDLQTYFQISGQDESQL 345          
The following BLAST results are available for this feature:
BLAST of EY666391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
TIG_SYNJA2.766e-1525.67Trigger factor OS=Synechococcus sp. (strain JA-3-3... [more]
TIG_PROM12.766e-1527.88Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_GEOTN3.612e-1528.14Trigger factor OS=Geobacillus thermodenitrificans ... [more]
TIG_SYNY34.717e-1527.45Trigger factor OS=Synechocystis sp. (strain PCC 68... [more]
TIG_PROMT6.161e-1526.67Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_SYNS38.047e-1528.71Trigger factor OS=Synechococcus sp. (strain CC9311... [more]
TIG_PROM41.051e-1428.02Trigger factor OS=Prochlorococcus marinus (strain ... [more]
TIG_AKKM81.373e-1426.52Trigger factor OS=Akkermansia muciniphila (strain ... [more]
TIG_ANATD1.793e-1429.94Trigger factor OS=Anaerocellum thermophilum (strai... [more]
TIG_STAHJ2.341e-1426.21Trigger factor OS=Staphylococcus haemolyticus (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666391 ID=EY666391; Name=EY666391; organism=Citrus sinensis; type=EST; length=868bp
TTAAGACGTCGCCATAAGTCCCTTGGATCACTGAAAATTGTCACTGACAG
AGGACTACAGGTCGGTGACATTGCAATCGTTGATATATCAGCAACAACAA
TAGATGAAGATGAATCAAATGTTCAAAATATTCCAGATGCAGAGACCAAA
GGATTTCATTTTGATACAGAAGATGGGGACAAAGTTCTTCCAGGTTTTCT
TGATTCTATAAGTGGAATTCAACGAGGTGAAACAAAGTCCTTTCGACTCG
CATTCCCTGAATCCTGGAGACAAGAACATCTTCGTGGTGTTCAAGCTCAA
TTTACTGTTGAATGCAGAGAACTGTTTTATAGAGATTTGCCGAAATTGGA
TGACTCCCTTGCTGGAAAGCTTCTTCCCGGATGCACTACCATAGAGCAGG
TCAAGGAAACATTATTGCAGAAGTGTCGAGAAGTGGAGCAAACTGCAAAA
GACCAGGCGACTGATAATGCAATTCTAGACCAGCTTTACAAGATGGTGGA
AATTGATATTCCTCAATCCTTGTTTGAGGAACAAGGAAAGCAGCTTTATG
GGGCTCAACTTTTGCAGATGCAGGCAGGTATGAAATTGAACGAACAGCAG
TTGGCTGCTCTATCAAGCCCAAAAAGCAGTAAAAAAGTTTCTGGGAAAAC
CACAGGGAAAACATAACCCAATGGGAATAAACCGGAATCCTACCCGGCGG
GAAAATATCTTTAAACGGGAAAATTTTGCAGTTTTCCACTGGAAAAACTA
ATCGAAGAAAGTTAAAAACTCCTTTTGGTGAATTTTAAAACCACCAAAAC
GCAAAAATATGGGGGGGGATTTACTGATAAAAAAAAAGGGGCCAAAAACT
TCCCGCAAAGGGGGCTCT
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