DC887272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887272 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20 Identity = 54/152 (35.53%), Postives = 89/152 (58.55%), Query Frame = -3 Query: 228 DRKKGXYLSFLKENMLRXESIENIYLQCPLTTLIWVYGNSFESFLVAVVVPDRKALEDWAVNHLHE--AVDFKSLCENPKARKYVLDELNSTAQKHKLRGFEMLKAVHLEPTPFDIEKDLITPTFKLKRPQLLKYYKDKIDQLYSEAKGSKP 677 DRKK + + + E +E+++++ P + ++VYG+S SFLV VVVPD + ++ + E + +L ++ + K +L ++ A + KL GFE LK +++E PF E +L+TP+FK KRPQL + Y+ ID LY+E K P Sbjct: 515 DRKKNIF-KLSQGEYVAAEYLESVFVRSPFASQVFVYGDSLNSFLVGVVVPDFEVVQKLFASKYPELDVSNHATLAKSKELYKEILSSFDACAAEAKLHGFEKLKHIYVEHEPFTEENNLLTPSFKPKRPQLKERYQTIIDTLYAEYKRDHP 665
BLAST of DC887272 vs. ExPASy Swiss-Prot
Match: ACSL5_MOUSE (Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 49/142 (34.51%), Postives = 81/142 (57.04%), Query Frame = -3 Query: 252 DRKKGXYLSFLKENMLRXESIENIYLQCPLTTLIWVYGNSFESFLVAVVVPDRKALEDWAVNHLHEAVDFKSLCENPKARKYVLDELNSTAQKHKLRGFEMLKAVHLEPTPFDIEKDLITPTFKLKRPQLLKYYKDKIDQLY 677 DRKK + + + E IEN+Y + ++V+G S SFL+ VVVPD +L +A + F+ LC+N ++ +L++L ++ L+ FE +K++ + P PF IE L+TPT K KR +L K+++ +I LY Sbjct: 539 DRKKNIF-KLAQGEYIAPEKIENVYSRSRPVLQVFVHGESLRSFLIGVVVPDPDSLPSFAAK-IGVKGSFEELCKNQCVKEAILEDLQKIGKEGGLKSFEQVKSIFVHPEPFTIENGLLTPTLKAKRVELAKFFQTQIKSLY 678
BLAST of DC887272 vs. ExPASy Swiss-Prot
Match: LCF2_YEAST (Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyces cerevisiae GN=FAA2 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.607e-16 Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = -3 Query: 246 ESIENIYLQ-CPLTTLIWVYGNSFESFLVAVVVPDRKALED-WAVNHLH-----EAVDFKSLCENPKARKYVLDELNSTAQKHKLRGFEMLKAVHLEPTPFDIEKDLITPTFKLKRPQLLKYYKDKIDQLYSE 623 E IENIYL CP T I+V+G+ ++FLV +V D A + A H + V ++L N K RK L+++N L+GFE L + + P +E D++TPTFK+KR + K++KD +DQLY+E Sbjct: 605 EKIENIYLSSCPYITQIFVFGDPLKTFLVGIVGVDVDAAQPILAAKHPEVKTWTKEVLVENLNRNKKLRKEFLNKINKCTDG--LQGFEKLHNIKVGLEPLTLEDDVVTPTFKIKRAKASKFFKDTLDQLYAE 735 HSP 2 Score: 20.4014 bits (41), Expect = 2.607e-16 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = -2 Query: 628 FKLSQGEYVA 657 FKL+ GEY+A Sbjct: 594 FKLAHGEYIA 603
BLAST of DC887272 vs. ExPASy Swiss-Prot
Match: ACSL4_RAT (Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus GN=Acsl4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 48/149 (32.21%), Postives = 70/149 (46.98%), Query Frame = -3 Query: 252 DRKK-------GXYLSFLKENMLRXESIENIYLQCPLTTLIWVYGNSFESFLVAVVVPDRKALEDWAVNHLHEAVDFKSLCENPKARKYVLDELNSTAQKHKLRGFEMLKAVHLEPTPFDIEKDLITPTFKLKRPQLLKYYKDKIDQLY 677 DRKK G Y+S K +E CPL I + S +S++++ VVP++K L A E + +C NP +L E+ A KL FE+ V L P P+ E L+T FKLKR +L +Y I+++Y Sbjct: 528 DRKKDLVKLQAGEYVSLGK--------VEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLAQQKGVEG-SWVDICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLKDIERMY 667
BLAST of DC887272 vs. ExPASy Swiss-Prot
Match: ACSL4_HUMAN (Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapiens GN=ACSL4 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 48/149 (32.21%), Postives = 70/149 (46.98%), Query Frame = -3 Query: 252 DRKK-------GXYLSFLKENMLRXESIENIYLQCPLTTLIWVYGNSFESFLVAVVVPDRKALEDWAVNHLHEAVDFKSLCENPKARKYVLDELNSTAQKHKLRGFEMLKAVHLEPTPFDIEKDLITPTFKLKRPQLLKYYKDKIDQLY 677 DRKK G Y+S K +E CPL I + S +S++++ VVP++K L A E + +C NP +L E+ A KL FE+ V L P P+ E L+T FKLKR +L +Y I+++Y Sbjct: 569 DRKKDLVKLQAGEYVSLGK--------VEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKRLTLLAQQKGVEGT-WVDICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDAFKLKRKELRNHYLKDIERMY 708
BLAST of DC887272 vs. ExPASy Swiss-Prot
Match: ACSL4_MOUSE (Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus GN=Acsl4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = -3 Query: 252 KENMLRXESIENIYL--------QCPLTTLIWVYGNSFESFLVAVVVPDRKALEDWAVNHLHEAVDFKSLCENPKARKYVLDELNSTAQKHKLRGFEMLKAVHLEPTPFDIEKDLITPTFKLKRPQLLKYYKDKIDQLY 644 K+++++ ++ E ++L CPL I + S +S++++ VVP++K L A E + +C NP +L E+ A KL FE+ V L P P+ E L+T FKLKR +L +Y ++++Y Sbjct: 571 KKDLVKLQAGEYVFLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLAQQKGVEG-SWVDICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLKDVERMY 708 The following BLAST results are available for this feature:
BLAST of DC887272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887272 ID=DC887272; Name=DC887272; organism=Citrus sinensis; type=EST; length=679bpback to top |