CX676592

Overview
NameCX676592
Unique NameCX676592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4633 contig Csv1_Contig4633:1..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: GDL80_ARATH (GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20
Identity = 48/120 (40.00%), Postives = 71/120 (59.17%), Query Frame = -3
Query:  332 RTCVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPLQNPCPNRREYVFWDAFHPTEAANTIIATRSY----SAQSPSDA 679
            R C+ RVN+  + FN++ + L+   N     AKF + + Y    D+  NP  YGF++ NT CC V  + G + CLP    C NR+++VFWDAFHP+++AN I+A   +    S+ SPS A
Sbjct:  233 RMCLNRVNEWVLEFNSRTKKLLIDLNKRLPGAKFSFADTYPAVLDLINNPTHYGFKIANTSCCNVDTSVGGL-CLPNSKMCKNRQDFVFWDAFHPSDSANQILADHLFSSLLSSSSPSPA 351          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.598e-20
Identity = 50/124 (40.32%), Postives = 67/124 (54.03%), Query Frame = -3
Query:  344 SPNQLAQNSPDGRTCVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPLQNPCPNRREYVFWDAFHPTEAANTIIATRSYSAQS 715
            +P +LAQ+S +G  C   +  A  +FN +L  L+   N       F+  NAY +  D  +NP ++GF  +   CCG G  NG   C P+ N CPNR  Y FWDAFHPTE AN II  +  +  S
Sbjct:  225 APAELAQHSRNGE-CYGALQTAAALFNPQLVDLIASVNAEIGQDVFVAANAYQMNMDYLSNPEQFGFVTSKVACCGQGPYNGIGLCTPVSNLCPNRDLYAFWDAFHPTEKANRIIVNQILTGSS 347          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 49/118 (41.53%), Postives = 61/118 (51.69%), Query Frame = -3
Query:  362 PNQLAQNSPDGRTCVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLP-LQNPCPNRREYVFWDAFHPTEAANTIIATR 712
            P+Q        R CV R NDA  +FN KL   +D  +    D   IYI+ Y    D+  NP +YGF+V N GCCG G       C     + CP R +YVFWD+FHPTE A  II  +
Sbjct:  248 PSQRTVAGGPTRDCVARFNDAAKLFNTKLSANIDVLSRTLQDPTIIYIDIYSPLLDLILNPHQYGFKVANKGCCGTGLIEVTALCNNYTASVCPIRSDYVFWDSFHPTEKAYRIIVAK 365          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: EXL2_ARATH (GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19
Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = -3
Query:  356 PNQLAQNSPDGRTCVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPL-QNPCPNRREYVFWDAFHPTEAANTIIATRSY 712
            P+Q        R CV R NDA  ++N KL   +   +    D   IY++ Y    DI  +P +YGF+V + GCCG G     + C     + CPNR EYVFWD+FHPTE    I+AT+ +
Sbjct:  256 PSQRTLAGGPTRNCVVRFNDATKLYNVKLAANLGSLSRTLGDKTIIYVDIYDSLLDIILDPRQYGFKVVDKGCCGTGLIEVALLCNNFAADVCPNRDEYVFWDSFHPTEKTYRIMATKYF 375          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = -3
Query:  317 PNQLAQNSPDGRTCVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPLQNPCPNRREYVFWDAFHPTEAANTIIATRSYSAQSPSDAYPIDI 712
            P +LAQ S +G  C   +  A  +FN +L  ++   NN    + FI  N   +  D  ++P  YGF  +   CCG G  NG   C PL N CPNR  + FWD FHP+E A+ IIA +  +  SP   +P+++
Sbjct:  227 PAELAQRSRNGE-CATELQRAASLFNPQLIQMITDLNNEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNRDLFAFWDPFHPSEKASRIIAQQILNG-SPEYMHPMNL 356          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = -3
Query:  362 PNQLAQNSPDGRTCVKRVNDANVIFNNKLRGLVD-QFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGV-GRNNGQITCLPLQNPCPNRREYVFWDAFHPTEAANTIIATR 712
            P Q + N  + + CV   N   + +N +L+ L+  +  ++  DA F+Y N Y +F D+  N   YGFR  +  CC   GR  G + C P  + C +R ++VFWDA+HPTEAAN +IA +
Sbjct:  236 PYQKSINQLNDKQCVDLANKLAIQYNARLKDLLTVELKDSLKDAHFVYANVYDLFMDLIVNFKDYGFRTASEACCETRGRLAGILPCGPTSSLCTDRSKHVFWDAYHPTEAANLLIADK 354          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 43/115 (37.39%), Postives = 61/115 (53.04%), Query Frame = -3
Query:  371 SPNQLAQNSPDGRTCVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPLQNPCPNRREYVFWDAFHPTEAANTII 715
            +P +LA++      C   +  A  +++ +L  ++++ N       FI  N   + +D  + P RYGF  +   CCG G  NG   C  L N CPNR  YVFWDAFHPTE AN +I
Sbjct:  225 APAELARSGTSNGRCSAELQRAASLYDPQLLQMINELNKKIGRNVFIAANTNQMQEDFLSTPRRYGFVTSKVACCGQGPYNGMGLCTVLSNLCPNRELYVFWDAFHPTEKANRMI 339          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = -3
Query:  371 RTCVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPLQNPCPNRREYVFWDAFHPTEAANTII 679
            R CV++ N  +V++N KL   + +   +   + F+Y N Y    D+  NP++YGF+ T  GCCG G       C PL   CPN  +++FWD+ HP+EAA   I
Sbjct:  243 RFCVEQENKDSVLYNQKLVKKLPEIQASLPGSNFLYANVYDPLMDMIQNPSKYGFKETKKGCCGTGYLETTFMCNPLTKTCPNHSDHLFWDSIHPSEAAYNYI 345          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = -3
Query:  383 CVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPLQNPCPNRREYVFWDAFHPTEAA 673
            CV++ N  ++++N KL   + +   +   +KF+Y N Y    D+  NP++YGF+ T  GCCG G       C  L   CPN  +++FWD+ HP+EAA
Sbjct:  244 CVEQENKDSILYNQKLVKKLPEIQASLPGSKFLYANVYDPVMDMIRNPSKYGFKETKKGCCGTGYLETSFLCTSLSKTCPNHSDHLFWDSIHPSEAA 340          
BLAST of CX676592 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 43/114 (37.72%), Postives = 52/114 (45.61%), Query Frame = -3
Query:  371 PNQLAQNSPDGRTCVKRVNDANVIFNNKLRGLVDQFNNNDSDAKFIYINAYGIFQDITANPARYGFRVTNTGCCGVGRNNGQITCLPLQNPCPNRREYVFWDAFHPTEAANTII 712
            P +LA +      C      A  IFN  L  ++   N       FI  NA+    D   NP R+GF  +   CCG G  NGQ  C PL   C +R  Y FWD FHPTE A  +I
Sbjct:  227 PAELASSGSVNGECAPEAQQAAAIFNPLLVQMLQGLNREIGSDVFIGANAFNTNADFINNPQRFGFVTSKVACCGQGAYNGQGVCTPLSTLCSDRNAYAFWDPFHPTEKATRLI 340          
The following BLAST results are available for this feature:
BLAST of CX676592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
GDL80_ARATH3.520e-2040.00GDSL esterase/lipase At5g37690 OS=Arabidopsis thal... [more]
LTL1_ARATH4.598e-2040.32GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
EXL1_ARATH3.892e-1941.53GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]
EXL2_ARATH5.084e-1939.17GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana ... [more]
GDL79_ARATH6.639e-1937.12GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL58_ARATH7.341e-1837.82GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
GDL77_ARATH1.252e-1737.39GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
GDL42_ARATH1.252e-1737.86GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GDL41_ARATH4.758e-1737.11GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]
GDL67_ARATH1.808e-1637.72GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70H12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70H12-O24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676592 ID=CX676592; Name=CX676592; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTTTTTTTTTTTTGGCAGCCAAAATCTGTTACATTAATTCCTCATT
GGATAAATTGAAATACACGCATAATTTAACTTAAAATACATGAGCTTTAG
TGACTTGAAATATTTATGTATAATTCCACAAACTGATATAACAATTGCAA
CAAGAAATTAAAATGACAGAGTAATAAAAGAAGTTGTTTTGGAGCGAGTA
ATATATAACGCTATCACATAAAAGTTTATCTTAATTTAATGCATGTAAGA
AATTATATGCTTTATCTTAATAGGCAGCCGTGTTGGTGTTGAGAATCAGA
GCTGAGCTAAGCGTCGAATATCAATGGGGTAAGCGTCTGATGGAGACTGA
GCAGAGTAAGATCTGGTGGCGATGATCGTATTCGCAGCTTCAGTTGGATG
AAAAGCATCCCAAAACACGTACTCCCTCCTGTTTGGGCATGGATTTTGAA
GAGGAAGACATGTAATTTGCCCATTGTTTCTTCCAACACCACAGCACCCA
GTATTTGTCACTCTAAAACCATAGCGTGCAGGATTGGCTGTAATATCTTG
GAAAATCCCATAAGCATTGATGTAGATAAACTTGGCATCAGAATCGTTGT
TGTTGAATTGATCAACGAGGCCTCTGAGCTTGTTATTGAATATTACGTTT
GCGTCATTCACTCTCTTCACACAAGTTCTCCCATCTGGACTGTTTTGAGC
CAATTGATTCGGGCTGC
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