CX676589

Overview
NameCX676589
Unique NameCX676589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_BRUSU (GTP-binding protein era homolog OS=Brucella suis GN=era PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.037e-13
Identity = 36/106 (33.96%), Postives = 64/106 (60.38%), Query Frame = -2
Query:  405 PWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 722
            PW      +S+  M+ ++ E+ RE+L   +H+E+PY+       W++ +DGS+RIEQ +   + SQ+KI++G  G  +  IG  A +E+  I ++ VHL L V+++
Sbjct:  187 PWYYPEDQISDIPMRQLAAEITREKLYLRLHEELPYASTVETERWEERKDGSVRIEQVIYVERESQKKIVLGHKGETVKAIGQAARKEISEILEQTVHLFLFVKVR 292          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_RHILO (GTP-binding protein era homolog OS=Rhizobium loti GN=era PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.660e-13
Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = -2
Query:  405 PWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 722
            PW      +S+  M+ ++ E+ RE+L   +HQE+PYS       W++  DGS+RI+Q +   + SQ+KI++G  G  I  IG  A  E+  I ++ VHL L V+++
Sbjct:  186 PWYYPEDQISDLPMRQLAAEITREKLYLRLHQELPYSSHIETEKWEEKPDGSVRIDQTIYVERDSQKKIVLGHKGETIRAIGQAARMEIAGILEQKVHLFLFVKVR 291          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERAL_HUMAN (GTP-binding protein era homolog OS=Homo sapiens GN=ERAL1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.475e-13
Identity = 36/105 (34.29%), Postives = 60/105 (57.14%), Query Frame = -2
Query:  408 PWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRL 722
            PW      ++ +  + I   ++RE+LL+H+ QE+PY+++ +   W++   G L I+Q L+  K S  K+L+G  G  I +I  EA  +L  IF  DV + L V+L
Sbjct:  331 PWEYHSAVLTSQTPEEICANIIREKLLEHLPQEVPYNVQQKTAVWEEGPGGELVIQQKLLVPKESYVKLLIGPKGHVISQIAQEAGHDLMDIFLCDVDIRLSVKL 435          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_RICCN (GTP-binding protein era homolog OS=Rickettsia conorii GN=era PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.927e-13
Identity = 38/108 (35.19%), Postives = 69/108 (63.89%), Query Frame = -2
Query:  405 PW--SEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 722
            PW  +ED +T  +  M+ I+ E+ RE+L  ++ +E+PY +  +   W+DL+D S++I Q ++ ++ S + I++GKNGSKI  IG ++  ++   F   VHL L V+++
Sbjct:  219 PWLYAEDDIT--DLPMRFIAAEITREQLFLNLQKELPYKLTVQTEKWEDLKDKSVKINQVIVVSRESYKTIILGKNGSKIKEIGAKSRMQMERFFGFPVHLFLFVKVR 324          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_RICCK (GTP-binding protein era homolog OS=Rickettsia canadensis (strain McKiel) GN=era PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.741e-13
Identity = 37/108 (34.26%), Postives = 68/108 (62.96%), Query Frame = -2
Query:  405 PW--SEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 722
            PW  +ED +T  +  M+ I+ E+ RE+L  ++ QE+PY +  +   W++L+D S++I Q ++  + S + I++GKNGSKI  IG ++  ++   F   +HL L V+++
Sbjct:  175 PWLYAEDDIT--DLPMRFIAAEITREQLFLNLQQELPYKLTVQTEKWEELKDKSVKINQVIVVARESYKTIILGKNGSKIKEIGAKSRMQMEQFFSCPIHLFLFVKVR 280          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_RICB8 (GTP-binding protein era homolog OS=Rickettsia bellii (strain OSU 85-389) GN=era PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.741e-13
Identity = 34/106 (32.08%), Postives = 67/106 (63.21%), Query Frame = -2
Query:  405 PWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 722
            PW  +   +++  M+ I+ E+ RE+L   + QE+PY +  +   W++L+D S++I Q ++ ++ S + I++GKNGSKI  +G ++  +++  F   VHL L V+++
Sbjct:  175 PWLYEEDDITDLPMRFIAAEITREQLFLGLQQELPYKLTVQTEKWEELKDKSVKINQIIVVSRESYKTIILGKNGSKIKELGAKSRMQMQQFFGFPVHLFLFVKVR 280          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_BRUME (GTP-binding protein era homolog OS=Brucella melitensis GN=era PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.741e-13
Identity = 35/106 (33.02%), Postives = 63/106 (59.43%), Query Frame = -2
Query:  405 PWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 722
            PW      +S+  M+ ++ E+ RE+L   +H+E+PY+       W++ +DGS+RIEQ +   + SQ+KI++G  G  +  IG  A +E+  I ++ VH  L V+++
Sbjct:  187 PWYYPEDQISDMPMRQLAAEITREKLYLRLHEELPYASTVETERWEERKDGSVRIEQVIYVERESQKKIVLGHKGETVKAIGQAARKEISEILEQTVHQFLFVKVR 292          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_RICBR (GTP-binding protein era homolog OS=Rickettsia bellii (strain RML369-C) GN=era PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.011e-12
Identity = 34/106 (32.08%), Postives = 67/106 (63.21%), Query Frame = -2
Query:  405 PWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 722
            PW  +   +++  M+ I+ E+ RE+L   + QE+PY +  +   W++L+D S++I Q ++ ++ S + I++GKNGSKI  +G ++  +++  F   VHL L V+++
Sbjct:  175 PWLYEEDDITDLPMRFIAAEITREQLFLGLQQELPYKLTVQTEKWEELKDKSVKINQIIVVSRESYKTIILGKNGSKIKELGAKSRMQMQQFFGFPVHLFLFVKVQ 280          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_RICFE (GTP-binding protein era homolog OS=Rickettsia felis GN=era PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.320e-12
Identity = 38/108 (35.19%), Postives = 68/108 (62.96%), Query Frame = -2
Query:  405 PW--SEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 722
            PW  +ED +T  +  M+ I+ E+ RE+L  ++ QE+PY +  +   W+ L+D S++I Q ++ ++ S + I++GKNGSKI  IG ++  ++   F   VHL L V+++
Sbjct:  173 PWLYAEDDIT--DLPMRFIAAEITREQLFFNLQQELPYKLTVQTEKWEVLKDKSIKINQVIVVSRESYKTIILGKNGSKIKEIGAKSRMQMERFFGFPVHLFLFVKVR 278          
BLAST of CX676589 vs. ExPASy Swiss-Prot
Match: ERA_MARMM (GTP-binding protein era homolog OS=Maricaulis maris (strain MCS10) GN=era PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.320e-12
Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = -2
Query:  408 ISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRL 674
            ++ E+ RE++   +H+E+PY+       WK LRDGSLRIEQ +I  + +Q+ I++GK GS +  IG  + +EL  +    VHL L V++
Sbjct:  206 LAAEITREKVYLRLHEELPYASMVETEVWKKLRDGSLRIEQSIIVERETQKPIVLGKGGSAVKSIGEASRKELEEVLGCKVHLFLNVKV 294          
The following BLAST results are available for this feature:
BLAST of CX676589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
ERA_BRUSU2.037e-1333.96GTP-binding protein era homolog OS=Brucella suis G... [more]
ERA_RHILO2.660e-1335.85GTP-binding protein era homolog OS=Rhizobium loti ... [more]
ERAL_HUMAN3.475e-1334.29GTP-binding protein era homolog OS=Homo sapiens GN... [more]
ERA_RICCN5.927e-1335.19GTP-binding protein era homolog OS=Rickettsia cono... [more]
ERA_RICCK7.741e-1334.26GTP-binding protein era homolog OS=Rickettsia cana... [more]
ERA_RICB87.741e-1332.08GTP-binding protein era homolog OS=Rickettsia bell... [more]
ERA_BRUME7.741e-1333.02GTP-binding protein era homolog OS=Brucella melite... [more]
ERA_RICBR1.011e-1232.08GTP-binding protein era homolog OS=Rickettsia bell... [more]
ERA_RICFE1.320e-1235.19GTP-binding protein era homolog OS=Rickettsia feli... [more]
ERA_MARMM1.320e-1239.33GTP-binding protein era homolog OS=Maricaulis mari... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70H07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70H07-O14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676589 ID=CX676589; Name=CX676589; organism=Citrus sinensis; type=EST; length=750bp
TTTTGAAAGTAATTTTTCAATGAATAACATAATGTAGTCATTGTACAATG
GTACATAAGTACAAAATTTATAAATACCAGAATGAATTCAGATTAAAAAA
GCTAGGCAAATTAATCTTAACGAGATGCTGCAAGATAAACATAATACAAG
AAAAGATAATGCAGATTTTTTCCCCCCCTAAAATAAGGGGCTCTTGGGGC
ATTTGTGTTACAACGCCTAGGTGTCCAATTTAAACTCCTGAATTAAAGCT
CAACTCTAAAAAACCTTTGCAAGGGAAAGAAACCAGATGTTTACCGTAGA
AGTGCACCTGATAGGCCTTCTTCATATATACACAATCAGATGGTACAGTG
CGAGATGAAGCACTTCTCAAAAATTGATTCATTTGTTGAGCCCATCACTT
AAGTCTTTAGTCTAACCTGGAGGATTAGATGCACATCCCTTTTAAAGATG
GACCTTAGCTCTTCATTAGCTTCAACACCTATTCTCCCTATTTTAGAGCC
ATTCTTCCCCACGAGAATTTTTCGCTGGCTTAGCTTGTTGGTAATCAAGT
GTTGTTCAATCCTAAGGGAGCCATCTCGTAAATCCTTCCAGTCTATCAAC
CGATGTTCAATACTGTAAGGAATTTCCTGATGTACATGGTCCAGTAACCT
CTCCCGGACGACTTCCAATGAAATGTTCTTCATAACTTCTTCACTCATGG
TTAATGGATCTTCAGACCAAGGTCTTTGAACTGCCTAAGCATAAAAAGCC
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