CX676568

Overview
NameCX676568
Unique NameCX676568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4114 contig Csv1_Contig4114:86..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 54/154 (35.06%), Postives = 84/154 (54.55%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA---IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG-RGMCGM 704
            + GC+GGLM  A++Y+   GGL+ E SYPY      C+++ E        F +IP  E  +   +   GP+++ ++A    FM  Y  G+     C  + ++HGVL+VGY   GF      N  YW++KNSWG++WG  GY ++ +  R  CG+
Sbjct:  175 NEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFM-FYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGI 324          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.004e-22
Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = -3
Query:  249 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGK-CQFDSEKIAVRVANFTNIPVD-ENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNT 704
            + GC+GGLM  A++Y+   GG++ E SYPY  K  + C++ +E  A     F +IP   E  +   +   GP+++ ++A     Q Y  G+     C  + L+HGVL+VGYG +G        + YWI+KNSWG++WGD GY  + + R   CG+ T
Sbjct:   62 NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEG-------GKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIAT 211          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22
Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGKK--WLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            ++GC GGL + A++Y++   G+  E +YPY GK G C+F   K    V +  NI + DE  +   +  + P++        FM  Y  G+     C K    +NH VL VGYG K          PYWI+KNSWG QWG +GY+ + RG+ MCG+
Sbjct:  178 NHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMM-YRTGIYSSTSCHKTPDKVNHAVLAVGYGEKN-------GIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL 324          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22
Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = -3
Query:  246 TCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFD-SEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG----RGMCGMNTM 710
            T +NGC+GGLM  A++Y++  GGL +E  YPY  + G C+    E   V +    ++P ++ +     + H PL++ ++A     Q Y GGV     CG   L+HGV  VGYG+   S        Y I+KNSWG +WG+ GY RL R      G+CG+N M
Sbjct:  196 TYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGR-CGVD-LDHGVAAVGYGSSKGS-------DYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKM 348          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = -3
Query:  270 GGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR 689
            GGL+ +A++Y+   GGL+ E SYPY  +   C++  E     V ++ +IP  EN++   L   GP++  ++A     + Y  G+     C  + ++HGVL+VGYGA G       N+ YWIIKNSWG  WG  GY ++ + R
Sbjct:    1 GGLIDDAFQYVKDNGGLDSEESYPYHAQGDSCKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADG---TETENKKYWIIKNSWGTDWGMDGYIKMAKDR 139          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.920e-22
Identity = 51/152 (33.55%), Postives = 83/152 (54.61%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEK--IAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            D GC+GGL+  A++ ++  GG++ E  YP++G+  +C  D  +  +   V  +  + V+E ++   L   GP+ + ++A  +  Y  GV     C    LNH VLLVGYG +          PYW+ KN+WG  WG++GY+R+ +    CGM
Sbjct:  203 DMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISS--CENNGLNHAVLLVGYGVEN-------GVPYWVFKNTWGDDWGENGYFRVRQNVNACGM 345          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 56/173 (32.37%), Postives = 88/173 (50.87%), Query Frame = -3
Query:  255 DIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIG--KRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGV--SCPLICGKKWLNHGVLLVGYG-----------AKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 728
            ++ + G C +GC GG + +A+  ++   GL  E  YP+ G  K  +C          + +F  +P +E +IA +L   GP+ + +N   ++ Y  GV  + P  C    ++H VLLVG+G           A G       + P+WI+KNSWG +WG  GY+RL RG   CG+
Sbjct:  180 ELLDCGRCGDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILKNSWGTKWGXGGYFRLYRGNNTCGI 352          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTN-IPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            D GC GGL+  A++ +I+ GG++ E+ YPY      C+ D  K  V V      I + E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N PYWI+KNSWG  WG+ G++++ +    CG+
Sbjct:  171 DVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGII--KYCANNGLNHAVLLVGYGVEN-------NVPYWILKNSWGTDWGEQGFFKIQQNVNACGI 312          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 55/151 (36.42%), Postives = 82/151 (54.30%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            D GC+GGL+  A++ +I  GG++ ES YPY      C+ +S K  V+V + +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N PYW  KN+WG  WG+ G++R+ +    CGM
Sbjct:  171 DAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII--KYCFNSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.987e-21
Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = -3
Query:  246 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGK-RGKCQFDSEKIAVRVANFTNIPV-DENQIA-AHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTM 704
            + GC+GGLMTNA++Y+I   GL  E  YPY  K   +C+F    +A ++ ++  I   DEN +  A L++   +AI  +    Q Y  GV     C  + L+HGVL VG G           + Y+I+KNSWG  WG +GY  + R +   CG++TM
Sbjct:  182 NEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTD-------NGEDYYIVKNSWGPSWGLNGYIHMARNKDNNCGISTM 331          
The following BLAST results are available for this feature:
BLAST of CX676568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATL1_CERAE3.066e-2235.06Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATL1_CHICK4.004e-2236.31Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CATH_HUMAN5.229e-2237.42Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
XCP2_ARATH6.830e-2237.65Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CATL1_FELCA6.830e-2236.62Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CATV_NPVLD8.920e-2233.55Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATW_FELCA1.522e-2132.37Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATV_NPVEP1.522e-2135.10Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATV_NPVAC1.522e-2136.42Viral cathepsin OS=Autographa californica nuclear ... [more]
CYSP3_DICDI1.987e-2136.94Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70G07-M14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676568 ID=CX676568; Name=CX676568; organism=Citrus sinensis; type=EST; length=742bp
GGAAGACACAATAGTATGTAGAAGAGCAGGTCTGAAAAGCATTTTCAAGT
CTAATCCAGAACTTACTTGAGAAAGGGGAATTATGAAACCGGAAAAGCTT
CAATAATTAGAAGATCACAAACAAGAACAAAAGGGAAACTAGCTACCATA
TAACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGA
GGGACTTCAAGTTTAGGAGGAGACTTGAGTGACCACTGCAGAAACCATGG
TGTTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGG
TCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATACGGCTGGTT
TCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACGAGCAGAA
CGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATGAGACTCCC
CCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACC
GTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGG
TAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTG
CCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGT
CGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGAACAACCAT
TGTCACAAGTACCCTTCTCCTTTATATCACACTACGCATTGA
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