CX676568

Overview
NameCX676568
Unique NameCX676568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4114 contig Csv1_Contig4114:86..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.987e-21
Identity = 54/151 (35.76%), Postives = 88/151 (58.28%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLIC-GKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            +NGC+GGLM  A + ++  GG+    + PY G  G C+    ++++  +    +  +EN++   LV +GP+++ ++   +  Y  G++   IC   + LNH VLLVGYG K        + PYWI+KNSWG +WG+ GY+R+ R +  CGM
Sbjct:  183 NNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVCKKSPFELSISGSR-RYVLQNENKLRELLVVNGPISVAIDVSDLINYKAGIAD--ICENNEGLNHAVLLVGYGVKN-------DVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.987e-21
Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 704
            ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG      ++ GN+ +WIIKNSWG+ WG+ GY  + R +   CG+
Sbjct:  174 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG------IQKGNK-HWIIKNSWGENWGNKGYILMARNKNNACGI 320          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.987e-21
Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 704
            ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG      ++ GN+ +WIIKNSWG+ WG+ GY  + R +   CG+
Sbjct:  174 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG------IQKGNK-HWIIKNSWGENWGNKGYILMARNKNNACGI 320          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.987e-21
Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 704
            ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG      ++ GN+ +WIIKNSWG+ WG+ GY  + R +   CG+
Sbjct:  174 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG------IQKGNK-HWIIKNSWGENWGNKGYILMARNKNNACGI 320          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21
Identity = 54/151 (35.76%), Postives = 82/151 (54.30%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            D GC+GGL+  A++ +I  GG++ ES YPY      C+ ++ K  V+V + +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N PYW  KN+WG  WG+ G++R+ +    CGM
Sbjct:  171 DAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGII--KYCFNSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEEGFFRVQQNINACGM 312          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21
Identity = 55/151 (36.42%), Postives = 82/151 (54.30%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            D GC+GGL+  A++ +I  GG++ ES YPY      C+ +S K  V+V + +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N PYW  KN+WG  WG+ G++R+ +    CGM
Sbjct:  171 DAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGII--KYCFDSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21
Identity = 52/147 (35.37%), Postives = 83/147 (56.46%), Query Frame = -3
Query:  270 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR 704
            + GC  G   NA++Y++  GGLE E++YPY  K G C+++ +  + ++  F  +P  E+ +   +   GP+A G++ I    + Y  GV     C   ++NH VL+VGYG +G          YW+IKNSWGK+WG  GY ++ + R
Sbjct:  186 NRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKC-SSYVNHAVLVVGYGFEG---NETDGNNYWLIKNSWGKRWGLRGYMKIAKDR 328          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            D GC GGL+  A++ ++  GG++ ES YPY    G C+ ++ K  V+V   +  I V E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGY  +          P+WI+KN+WG  WG+ GY+R+ +    CG+
Sbjct:  172 DAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGIM--KYCANHGLNHAVLLVGYAVE-------NGVPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21
Identity = 55/156 (35.26%), Postives = 85/156 (54.49%), Query Frame = -3
Query:  249 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAI--GLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKN-SWGKQWGDHGYYRLCRG-RGMCGMNT 704
            + GC+GG M N ++Y+   GGL+ E+SYPY GK   C+++ +  A     F +IP  E  +A  +   GP+++  G + +  Q Y  G+     C  + L+H +LLVGY  +G       N  YW++KN S GK WG  GY ++ +  R  CG+ T
Sbjct:  118 NEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYNPKYSAANDTGFVDIPSQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCDPEGLDHAMLLVGYSYEGAD---SDNNKYWLVKNSSEGKNWGMDGYIKMAKDRRNNCGIAT 270          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21
Identity = 51/153 (33.33%), Postives = 82/153 (53.59%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG-RGMCGM 704
            + GC+GGLM  A++Y+   GGL+ E SYPY      C+++ +        F +IP  E  +   +   GP+++ ++A       Y  G+     C  + ++HGVL+VGY   GF      N  YW++KNSWG++WG  GY ++ +  R  CG+
Sbjct:  175 NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI 324          
The following BLAST results are available for this feature:
BLAST of CX676568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATV_GVCP1.987e-2135.76Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATK_MACMU1.987e-2135.06Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.987e-2135.06Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN1.987e-2135.06Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATV_NPVRO2.595e-2135.76Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVBM2.595e-2136.42Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATQ_RAT2.595e-2135.37Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATV_NPVCF3.390e-2134.44Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATL6_HUMAN3.390e-2135.26Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATL1_HUMAN3.390e-2133.33Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70G07-M14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676568 ID=CX676568; Name=CX676568; organism=Citrus sinensis; type=EST; length=742bp
GGAAGACACAATAGTATGTAGAAGAGCAGGTCTGAAAAGCATTTTCAAGT
CTAATCCAGAACTTACTTGAGAAAGGGGAATTATGAAACCGGAAAAGCTT
CAATAATTAGAAGATCACAAACAAGAACAAAAGGGAAACTAGCTACCATA
TAACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGA
GGGACTTCAAGTTTAGGAGGAGACTTGAGTGACCACTGCAGAAACCATGG
TGTTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGG
TCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATACGGCTGGTT
TCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACGAGCAGAA
CGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATGAGACTCCC
CCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACC
GTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGG
TAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTG
CCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGT
CGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGAACAACCAT
TGTCACAAGTACCCTTCTCCTTTATATCACACTACGCATTGA
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