CX676568

Overview
NameCX676568
Unique NameCX676568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4114 contig Csv1_Contig4114:86..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21
Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 704
            ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG      ++ GN+ +WIIKNSWG+ WG+ GY  + R +   CG+
Sbjct:  175 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYG------IQKGNK-HWIIKNSWGENWGNKGYILMARNKNNACGI 321          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.427e-21
Identity = 54/154 (35.06%), Postives = 85/154 (55.19%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 704
            ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG      ++ GN+ +WIIKNSWG+ WG+ GY  + R +   CG+
Sbjct:  174 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYG------IQKGNK-HWIIKNSWGENWGNKGYILMARNKNNACGI 320          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21
Identity = 52/151 (34.44%), Postives = 82/151 (54.30%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            D GC GGL+  AY+ ++  GG++ E+ YPY    G C+ ++ K  VRV   +  + + E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +          P+WI+KN+WG  WG+ GY+R+ +    CG+
Sbjct:  172 DVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGII--RYCENHGLNHAVLLVGYGVE-------NGIPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21
Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPL--AIGLNAIFMQTYIGGVSCPLICGKK--WLNHGVLLVGYGA-KGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            ++GC GGL + A++Y+    G+  E +YPY G+ G C++   K    V +  NI + DE  +   +  H P+  A  + A FM  Y  G+     C K    +NH VL VGYG  KG         PYWI+KNSWG  WG  GY+ + RG+ MCG+
Sbjct:  178 NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGI--------PYWIVKNSWGPNWGMKGYFLIERGKNMCGL 324          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 704
            D GC GGL+  AY+ ++  GG++ E+ YPY    G C+ ++ K  V+V   +  + + E ++   L   GPL + ++A  +  Y  GV     C    LNH VLLVGY  +          P+WI+KN+WG  WG+ GY+R+ +    CG+
Sbjct:  172 DMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNYKRGVI--RYCANHGLNHAVLLVGYAVE-------NGVPFWILKNTWGTDWGEQGYFRVQQNINACGI 313          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21
Identity = 56/160 (35.00%), Postives = 85/160 (53.12%), Query Frame = -3
Query:  246 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKI-AVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG----RGMCGMNTM 704
            ++GC+GGLM +A+ ++I  GG++ E  YPY    GKC  + E    V +  F ++P ++ +     V H P+++ + A     Q Y  GV     CG   L+HGV+ VGYG           + YWI++NSWG +WG+ GY R+ R      G CG+  M
Sbjct:  202 NSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTS-LDHGVVAVGYGTD-------NGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMM 352          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.288e-20
Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = -3
Query:  255 CDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKI---AVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG----RGMCGM 731
            CD +E    + GC+GGLM +A++++   GG+  ES+YPY  + G C  D+ K+   AV +    N+P ++       V + P+++ ++A     Q Y  GV     C    LNHGV +VGYG        +    YWI++NSWG +WG+HGY R+ R      G+CG+
Sbjct:  183 CDKEE----NQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTC--DASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCSTD-LNHGVAIVGYGTT------VDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGI 336          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 60/171 (35.09%), Postives = 91/171 (53.22%), Query Frame = -3
Query:  246 CDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKI---AVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG----RGMCGMNTM 731
            CD +E    + GC+GGLM +A++++   GG+  ES+YPY  + G C  D  K+   AV +    N+PV++       V + P+++ ++A     Q Y  GV     C    LNHGV +VGYG        +    YWI++NSWG +WG+ GY R+ R      G+CG+  M
Sbjct:  183 CDKEE----NQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTC--DESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCNTD-LNHGVAIVGYGT------TVDGTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMM 339          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 53/152 (34.87%), Postives = 83/152 (54.61%), Query Frame = -3
Query:  255 GCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 698
            GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    +NH VL VGYG      ++ GN+ +WIIKNSWG+ WG+ GY  + R +   CG+
Sbjct:  176 GCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYG------IQKGNK-HWIIKNSWGESWGNKGYILMARNKNNACGI 320          
BLAST of CX676568 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 52/154 (33.77%), Postives = 82/154 (53.25%), Query Frame = -3
Query:  255 DNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 704
            ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG +         + +WIIKNSWG+ WG+ GY  + R +   CG+
Sbjct:  175 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGKKHWIIKNSWGENWGNKGYILMARNKNNACGI 321          
The following BLAST results are available for this feature:
BLAST of CX676568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATK_CANFA3.390e-2135.06Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_BOVIN4.427e-2135.06Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATV_NPVAP5.782e-2134.44Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATH_BOVIN5.782e-2137.82Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATV_NPVCD7.551e-2134.44Viral cathepsin OS=Choristoneura fumiferana defect... [more]
ORYB_ORYSJ9.862e-2135.00Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSEP_PHAVU1.288e-2035.12Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSEP_VIGMU1.682e-2035.09Vignain OS=Vigna mungo PE=1 SV=1[more]
CATK_RABIT1.682e-2034.87Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_PIG1.682e-2033.77Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70G07-M14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676568 ID=CX676568; Name=CX676568; organism=Citrus sinensis; type=EST; length=742bp
GGAAGACACAATAGTATGTAGAAGAGCAGGTCTGAAAAGCATTTTCAAGT
CTAATCCAGAACTTACTTGAGAAAGGGGAATTATGAAACCGGAAAAGCTT
CAATAATTAGAAGATCACAAACAAGAACAAAAGGGAAACTAGCTACCATA
TAACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGA
GGGACTTCAAGTTTAGGAGGAGACTTGAGTGACCACTGCAGAAACCATGG
TGTTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGG
TCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATACGGCTGGTT
TCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACGAGCAGAA
CGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATGAGACTCCC
CCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACC
GTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGG
TAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTG
CCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGT
CGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGAACAACCAT
TGTCACAAGTACCCTTCTCCTTTATATCACACTACGCATTGA
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