EY666369

Overview
NameEY666369
Unique NameEY666369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.755e-12
Identity = 44/138 (31.88%), Postives = 66/138 (47.83%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSHWQ 627
            ++E +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER +E+  EL  +L+++ L +   L+  NK D+P A +  E+   LG   L H Q
Sbjct:   15 KREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQ 152          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12
Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +LS++ L +   L+  NK D+P A +  E+   LG   L
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSL 148          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 44/124 (35.48%), Postives = 60/124 (48.39%), Query Frame = 1
Query:  217 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDEL 588
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP L+  NK D+  AA   E+
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEI 139          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 47/147 (31.97%), Postives = 66/147 (44.90%), Query Frame = 1
Query:  190 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL--SHW 624
            IL  +   ++E ++L LGLDNAGKTT+L     E +    PT     + L     K   +D+GG +  R  W                   +R  + +REL  LL +E LA    LI  NK D+P A S + +R  L  D +   HW
Sbjct:    6 ILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSHHW 152          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 45/132 (34.09%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  220 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSI-GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQ 612
            EA+++ +GLD+AGKTTLL+ LK  +LV+  PT     E L   G +    +D+GG    R  W                    R  ES  EL  +L+D ++A VPFL+L NK + P A    ++R  L  ++
Sbjct:   12 EAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLER 143          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 43/121 (35.54%), Postives = 58/121 (47.93%), Query Frame = 1
Query:  217 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASE 579
            KEA+IL LGLDNAGKTT+L+ L+   +V   PT     E +    IKF+ +DLGG    R  W                   +R   +K E  A+L ++ L     LI  NK D+P A  +
Sbjct:   16 KEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDD 136          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL--SHW 624
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L   HW
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW 153          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_XENLA (ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSH 621
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L H
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRH 150          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_RAT (ADP-ribosylation factor 1 OS=Rattus norvegicus GN=Arf1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSH 621
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L H
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRH 150          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL--SHW 624
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L   HW
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW 153          
The following BLAST results are available for this feature:
BLAST of EY666369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
ARF1_SCHPO1.755e-1231.88ADP-ribosylation factor 1 OS=Schizosaccharomyces p... [more]
ARF_CRYNE2.293e-1232.84ADP-ribosylation factor OS=Cryptococcus neoformans... [more]
ARL3_RAT2.994e-1235.48ADP-ribosylation factor-like protein 3 OS=Rattus n... [more]
ARL2_BOVIN2.994e-1231.97ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARL11_HUMAN2.994e-1234.09ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
ARF3_ARATH2.994e-1235.54ADP-ribosylation factor 3 OS=Arabidopsis thaliana ... [more]
ARF2_ORYSJ2.994e-1232.37ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_XENLA2.994e-1232.35ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf... [more]
ARF1_RAT2.994e-1232.35ADP-ribosylation factor 1 OS=Rattus norvegicus GN=... [more]
ARF1_ORYSJ2.994e-1232.37ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666369 ID=EY666369; Name=EY666369; organism=Citrus sinensis; type=EST; length=892bp
CGGGCGGGCACCTGCGGTACGGTCCCGGATTCCCGGGTCGACCCCGCGTC
CGATCACGCACTCGTTGATTCCTCCTAATTATCTCAAAGATTCATCATAT
TTGAGCCAAAATTCGATCTTTTTGATAGATTCATTATAAATAAGGAGTAA
TAAAAGAAACCCATGTTTTTGTTTGATTGGTTTTATGGGATTCTTGCATC
TCTTGGGCTCTGGCAAAAAGAGGCCAAGATCTTGTTTCTCGGCCTCGATA
ATGCCGGTAAAACGACGCTGCTTCATATGTTGAAAGATGAGAGATTAGTT
CAACATCAACCAACACAACATCCCACTTCGGAGGAACTGAGTATTGGGAA
AATCAAGTTTAAGGCTTTTGATTTGGGAGGGCATCAGATTGCTCGTAGAG
TTTGGAAAGATTACTACGCCAAGGTTGATGCGGTTGTGTACCTGGTAGAT
GCGTATGACAAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCTTGATGCCCT
GCTTTCAGATGAATCCTTGGCCAATGTTCCATTCCTAATTTTGGGCAACA
AAATTGATATCCCATATGCTGCATCAGAAGATGAGTTGCGATATCACCTT
GGAACTGACCAACTTTCCCACTGGCAAAGGTAAGGTGAATCTGGTTGATT
CAAACGCTCCTCCCCCTTGAAGGGATTCATGGGCACAATTGTCCGCAAAA
GGGGTTCGGAAAAGGGATTAAGTGGCTGGCCTCAATACTCAAGTTAAACC
AAACTCAAAAATTTGCCCGCCTCTTCCCTCAAAGCCTGCCACCACCCTAA
TCTATGAAGCTCGCACATTCCTTTTCCGACCTCTGCTTCGCTCAGCTCCC
CCCAGCTCCCCTCCTCCACTTTCCTTTCCCGCTCCCCTCCTC
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