EY666369

Overview
NameEY666369
Unique NameEY666369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_MOUSE (ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSH 621
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L H
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRH 150          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_MACFA (ADP-ribosylation factor 1 OS=Macaca fascicularis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSH 621
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L H
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRH 150          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_HUMAN (ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSH 621
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L H
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRH 150          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL--SHW 624
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L   HW
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW 153          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_BOVIN (ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = 1
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSH 621
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L H
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRH 150          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 47/149 (31.54%), Postives = 70/149 (46.98%), Query Frame = 1
Query:  184 YGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL--SHW 624
            +G L S    +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   +R  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L   HW
Sbjct:    5 FGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW 153          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 48/147 (32.65%), Postives = 68/147 (46.26%), Query Frame = 1
Query:  181 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSH 621
            F+  ++S      E + L LGLD AGKTT+L+ LK    V   PT     E ++  KI    +D+GG +  R +W                   ER  E+K EL +LL++  LA+   L+  NK D+P A S  EL   L    L +
Sbjct:    4 FFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKN 150          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARL_SCHPO (ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces pombe GN=alp41 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 46/148 (31.08%), Postives = 68/148 (45.95%), Query Frame = 1
Query:  190 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL--SHWQ 627
            IL    L ++E ++L LGLDNAGKTT+L  L +E + +  PT       L +  ++F  +D+GG +  R  W                    R  E +  L  LL +E L     L+L NK D+  A S +E+   L   +   SHW+
Sbjct:    6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYKSSHWR 153          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 46/138 (33.33%), Postives = 64/138 (46.38%), Query Frame = 1
Query:  208 LW--QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            LW   KE +IL LGLD AGKTT+L+ L+   +V  +PT     E LS   +K   +DLGG    R  W                   +R + + +EL  +L +E L +   L+  NK D P A S  E+   L   +L
Sbjct:   12 LWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVEL 149          
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 47/151 (31.13%), Postives = 73/151 (48.34%), Query Frame = 1
Query:  169 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQLSH 621
            +  +F G+L S     +E +IL LGLD AGKTT+L+ L+   +V   PT     E+++   +KF+ +DLGG    R  W                   +R   SK EL  +L +E LA    ++L NK D+    +  E+ + LG + L +
Sbjct:    4 VLSYFRGLLGS-----REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKN 149          
The following BLAST results are available for this feature:
BLAST of EY666369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
ARF1_MOUSE2.994e-1232.35ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 ... [more]
ARF1_MACFA2.994e-1232.35ADP-ribosylation factor 1 OS=Macaca fascicularis G... [more]
ARF1_HUMAN2.994e-1232.35ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 ... [more]
ARF1_CHLRE2.994e-1232.37ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]
ARF1_BOVIN2.994e-1232.35ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE... [more]
ARF1_ARATH2.994e-1231.54ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF11_CAEEL2.994e-1232.65ADP-ribosylation factor 1-like 1 OS=Caenorhabditis... [more]
ARL_SCHPO3.911e-1231.08ADP-ribosylation factor-like protein alp41 OS=Schi... [more]
ARL1_YEAST3.911e-1233.33ADP-ribosylation factor-like protein 1 OS=Saccharo... [more]
ARL1_DROME3.911e-1231.13ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666369 ID=EY666369; Name=EY666369; organism=Citrus sinensis; type=EST; length=892bp
CGGGCGGGCACCTGCGGTACGGTCCCGGATTCCCGGGTCGACCCCGCGTC
CGATCACGCACTCGTTGATTCCTCCTAATTATCTCAAAGATTCATCATAT
TTGAGCCAAAATTCGATCTTTTTGATAGATTCATTATAAATAAGGAGTAA
TAAAAGAAACCCATGTTTTTGTTTGATTGGTTTTATGGGATTCTTGCATC
TCTTGGGCTCTGGCAAAAAGAGGCCAAGATCTTGTTTCTCGGCCTCGATA
ATGCCGGTAAAACGACGCTGCTTCATATGTTGAAAGATGAGAGATTAGTT
CAACATCAACCAACACAACATCCCACTTCGGAGGAACTGAGTATTGGGAA
AATCAAGTTTAAGGCTTTTGATTTGGGAGGGCATCAGATTGCTCGTAGAG
TTTGGAAAGATTACTACGCCAAGGTTGATGCGGTTGTGTACCTGGTAGAT
GCGTATGACAAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCTTGATGCCCT
GCTTTCAGATGAATCCTTGGCCAATGTTCCATTCCTAATTTTGGGCAACA
AAATTGATATCCCATATGCTGCATCAGAAGATGAGTTGCGATATCACCTT
GGAACTGACCAACTTTCCCACTGGCAAAGGTAAGGTGAATCTGGTTGATT
CAAACGCTCCTCCCCCTTGAAGGGATTCATGGGCACAATTGTCCGCAAAA
GGGGTTCGGAAAAGGGATTAAGTGGCTGGCCTCAATACTCAAGTTAAACC
AAACTCAAAAATTTGCCCGCCTCTTCCCTCAAAGCCTGCCACCACCCTAA
TCTATGAAGCTCGCACATTCCTTTTCCGACCTCTGCTTCGCTCAGCTCCC
CCCAGCTCCCCTCCTCCACTTTCCTTTCCCGCTCCCCTCCTC
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