EY666369

Overview
NameEY666369
Unique NameEY666369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 46/149 (30.87%), Postives = 70/149 (46.98%), Query Frame = 1 
Query:  169 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            LFD  +G        +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I+F  +D+GG    R +W                   +R  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG   L
Sbjct:   11 LFDGLFG--------KKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSL 151
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 1 
Query:  214 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL--SHW 624
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   +R  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LG + L   HW
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHW 153
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 1 
Query:  217 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LG  ++
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI 144
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 1 
Query:  217 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LG  ++
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI 144
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 1 
Query:  217 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LG  ++
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI 144
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 1 
Query:  217 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LG  ++
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI 144
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 1 
Query:  217 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LG  ++
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI 144
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF3_YEAST (ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae GN=ARF3 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 41/124 (33.06%), Postives = 61/124 (49.19%), Query Frame = 1 
Query:  217 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDEL 588
            KE KIL LGLD AGKTT+L+ LK  ++    PT     E ++   +KF  +D+GG Q  R +W                    R  E+K EL +++ ++ + NV  L+  NK D+  A    E+
Sbjct:   16 KEMKILMLGLDKAGKTTILYKLKLNKIKTSTPTVGFNVETVTYKNVKFNMWDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDLKDAMKPQEV 139
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 45/143 (31.47%), Postives = 68/143 (47.55%), Query Frame = 1 
Query:  187 GILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQL 615
            G L S     KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E++ EL  +++D  + +   LI  NK D+P A    E++  LG  ++
Sbjct:    2 GKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI 144
[Close]
BLAST of EY666369 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12
Identity = 45/132 (34.09%), Postives = 64/132 (48.48%), Query Frame = 1 
Query:  220 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSI-GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGTDQ 612
            +A+++ LGLD AGKTT+L+ LK  RLV   PT     E L   G +    +D+GG    R  W                    R  E+  EL+ +L D ++A VPFL+L NK + P A    E+R  L  ++
Sbjct:   10 KAQVVMLGLDCAGKTTILYKLKGNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLDLER 141
The following BLAST results are available for this feature:
BLAST of EY666369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
ARF_NEUCR3.911e-1230.87ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]
ARF_MAIZE3.911e-1231.65ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF6_RAT3.911e-1231.58ADP-ribosylation factor 6 OS=Rattus norvegicus GN=... [more]
ARF6_PIG3.911e-1231.58ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE... [more]
ARF6_MOUSE3.911e-1231.58ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 ... [more]
ARF6_HUMAN3.911e-1231.58ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 ... [more]
ARF6_CHICK3.911e-1231.58ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6... [more]
ARF3_YEAST3.911e-1233.06ADP-ribosylation factor 3 OS=Saccharomyces cerevis... [more]
ARF3_DROME3.911e-1231.47ADP-ribosylation factor 3 OS=Drosophila melanogast... [more]
ARL11_RAT5.107e-1234.09ADP-ribosylation factor-like protein 11 OS=Rattus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666369 ID=EY666369; Name=EY666369; organism=Citrus sinensis; type=EST; length=892bp
CGGGCGGGCACCTGCGGTACGGTCCCGGATTCCCGGGTCGACCCCGCGTC
CGATCACGCACTCGTTGATTCCTCCTAATTATCTCAAAGATTCATCATAT
TTGAGCCAAAATTCGATCTTTTTGATAGATTCATTATAAATAAGGAGTAA
TAAAAGAAACCCATGTTTTTGTTTGATTGGTTTTATGGGATTCTTGCATC
TCTTGGGCTCTGGCAAAAAGAGGCCAAGATCTTGTTTCTCGGCCTCGATA
ATGCCGGTAAAACGACGCTGCTTCATATGTTGAAAGATGAGAGATTAGTT
CAACATCAACCAACACAACATCCCACTTCGGAGGAACTGAGTATTGGGAA
AATCAAGTTTAAGGCTTTTGATTTGGGAGGGCATCAGATTGCTCGTAGAG
TTTGGAAAGATTACTACGCCAAGGTTGATGCGGTTGTGTACCTGGTAGAT
GCGTATGACAAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCTTGATGCCCT
GCTTTCAGATGAATCCTTGGCCAATGTTCCATTCCTAATTTTGGGCAACA
AAATTGATATCCCATATGCTGCATCAGAAGATGAGTTGCGATATCACCTT
GGAACTGACCAACTTTCCCACTGGCAAAGGTAAGGTGAATCTGGTTGATT
CAAACGCTCCTCCCCCTTGAAGGGATTCATGGGCACAATTGTCCGCAAAA
GGGGTTCGGAAAAGGGATTAAGTGGCTGGCCTCAATACTCAAGTTAAACC
AAACTCAAAAATTTGCCCGCCTCTTCCCTCAAAGCCTGCCACCACCCTAA
TCTATGAAGCTCGCACATTCCTTTTCCGACCTCTGCTTCGCTCAGCTCCC
CCCAGCTCCCCTCCTCCACTTTCCTTTCCCGCTCCCCTCCTC
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