EY666368

Overview
NameEY666368
Unique NameEY666368
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666368 vs. ExPASy Swiss-Prot
Match: PMIP1_CRYNE (Mitochondrial intermediate peptidase 1 OS=Cryptococcus neoformans GN=OCT1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11
Identity = 55/194 (28.35%), Postives = 88/194 (45.36%), Query Frame = 1
Query:   64 EEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQD---MEDLKSFSK-SQGALEADKLDHWDISFWSERLRESKYEINE-EELRPYFSLPKVMDGLFNLAKTLFGIDIEPAD-GLAPVWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGA 624
            EE  R     +   D D   +++ +LK R E A +LG + +A+V+++ KMA T     + L  L +     A  D   ++ LK+ S  S+ + +   +  WD   ++E+   S         + PYFS+   M GL ++   L+GI  +P       VW+  VR   V D  G      Y D +SRP +   GA
Sbjct:  258 EEARRLVYIGSMREDKDRVYVLETMLKERAELAHVLGKETWADVALSDKMAKTPQNVLQFLTSLATHHRPSAAADVAALQRLKALSTVSRTSSQLPTVHAWDRDHYAEQYAASLLPNGSLPSITPYFSVGTAMSGLSHMLSRLYGISFKPVSVAHGEVWHPSVRRLDVMDEHGKRIGVIYCDLFSRPGKPSAGA 451          
BLAST of EY666368 vs. ExPASy Swiss-Prot
Match: PMIP_NEUCR (Mitochondrial intermediate peptidase OS=Neurospora crassa GN=oct-1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11
Identity = 58/218 (26.61%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   13 APSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKM--ATVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFWSERLRES-KYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGL-APVWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGAWDGMRLFLEV 654
            +P     ++  ++   R +++ A  SR +S    +T  ++ ++ LR E AKL G+++Y  + +  +M  +T +   + L+ L   +   A Q++ DL +  ++    +A  L+ WD  F++E +R++ K     E+L  YFSL  VM GL  +   L+GI   P + +    W+ DVR   V        A  Y D + RP +    A   +R   E+
Sbjct:  289 SPQASIALRTVRDDHARHQLFMA--SRTASRRTVHT--LEELMLLRGESAKLSGFESYGHLVLHDRMMASTPESVRQFLQALSENTRPQAQQEVADLTAAKRAHKGGDAT-LEPWDKDFYAESIRQAIKSRQKREDLSSYFSLGTVMQGLSRIFTRLYGIRFVPREPMPGETWHPDVRRLDVVSDVEGHVAVLYCDLFYRPLKSPNPAHFTLRCSREL 501          
BLAST of EY666368 vs. ExPASy Swiss-Prot
Match: PMIP_ASPNC (Mitochondrial intermediate peptidase OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=oct1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11
Identity = 62/204 (30.39%), Postives = 98/204 (48.04%), Query Frame = 1
Query:   58 LREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMATVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFW-SERLRESKYEINEEELR---PYFSLPKVMDGLFNLAKTLFGIDIEPADGLA-PVWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGAWDGMRLFLEV 654
            +R EVY A  +R SS        ++++L  R E A+L GY ++A ++++ KMA   +A          S  P VQ  E+L      +G+  A +L  WD +++  +R+ +        EL     +FSL  VM GL  L   L+G+ + P +  A   WN+DVR   V D +    A  Y D +SRP++    A   +R   E+
Sbjct:  298 VRREVYLA--TRTSSAR--QIQRLEQLLAKRAELAQLSGYDSFAHMTLSDKMAKSPEAVSNFLTSLVGSNRPYVQ--EELAQLQSMKGS--AGRLQPWDHAYYVHQRVLQYSQSRRSRELSAVPEFFSLGTVMQGLSRLFDRLYGVRLVPQETAAGETWNSDVRRLDVVDEADRHIAVIYCDLFSRPNKHPNPAHYTLRCAREI 493          
BLAST of EY666368 vs. ExPASy Swiss-Prot
Match: PMIP_SCHPO (Mitochondrial intermediate peptidase OS=Schizosaccharomyces pombe GN=oct1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.328e-11
Identity = 54/202 (26.73%), Postives = 95/202 (47.03%), Query Frame = 1
Query:   49 NRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMATVDK-AFELLEKLQSASWDPAVQDMEDLKSFSKSQGALE-ADKLDHWDISFWSERLRES----KYEINEE--ELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAP--VWNNDVRFYCVKDSSGSPNAYFYFDPYSRPSEKKGGA 624
            N  +R+E+Y         G ++   +++  L+ + E AKL+G  ++A++ +  KMA   K   E LE L   +     + + +L    K +  L      D WD  +++ R ++S    K  +N      R +FS+  V+ GL  L  +L+G+   PAD ++P  VW+ DV    V + +       YFD ++R  +  G A
Sbjct:  279 NPDVRKEIYM----EGHKGTVEEVELLNSYLRSKAEVAKLVGKSSFADLQLIDKMANAPKHVVEFLENLSLKNSSVLKKILNNLALMKKKELNLNFLPSFDVWDREYYTARYKQSLINQKPSLNPSITNYRRFFSVGTVIQGLSRLFSSLYGLRFVPAD-ISPGEVWHPDVNKVNVYNENDHVMGVIYFDLFARTGKTDGAA 475          

HSP 2 Score: 21.9422 bits (45), Expect = 5.328e-11
Identity = 17/71 (23.94%), Postives = 31/71 (43.66%), Query Frame = 3
Query:  624 VGWDEVVSRSPVLSRNGTTSRVPVAHLVCNQTPLVGKKPTLMKFPGG*KMFSMNFGLGLQHILTPTGMKNL 836
            +G+D+  +   +  ++    ++PV  L+CN     G  PT +       +F    G  +  IL  T  +NL
Sbjct:  496 LGFDDATN---IRVKDNKRYQIPVISLLCNFVRSSGMDPTFLDLWDVKTLFH-EMGHAMHSILGHTKYQNL 562          
BLAST of EY666368 vs. ExPASy Swiss-Prot
Match: THOPL_DICDI (Thimet-like oligopeptidase OS=Dictyostelium discoideum GN=DDB_G0292362 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.347e-11
Identity = 53/210 (25.24%), Postives = 96/210 (45.71%), Query Frame = 1
Query:    1 ITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEV-SMAMKMATVDKAFELLEKLQSASWDPAVQDMEDLKSFSK----SQGALEADKLDH---WDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGIDIEPADGLAPVWNNDVRFYCVKDSSGSPN--AYFYFDPYSR 600
            I+L  P  +  M++      R+ V  A  S+      +NTPI++   KLR E A+LLG+K++A   S  + + + D      E+++      AV + + LK   K     +G       DH   +D +F++  +    Y+++   ++ YF    V+ G+FN  + L  +         P W+ +V+ Y   D++ S     +FY D + R
Sbjct:  205 ISLKYPDVIPTMKYCTVAETRKAVEFANGSKCIK---ENTPILEETCKLRFEAAQLLGFKDWASYKSNYLMVKSNDNIQSFEERMRKLLTPHAVTEYDRLKQLKKKIYLEKGGNPETYDDHYYSYDNAFYNNVMLVQDYQVDNNLVKEYFPFEVVIKGIFNCYQELLNVKFTEVPAYQP-WHEEVKMYSCVDTADSNKLLGHFYIDLFPR 410          

HSP 2 Score: 21.1718 bits (43), Expect = 5.347e-11
Identity = 14/53 (26.42%), Postives = 21/53 (39.62%), Query Frame = 3
Query:  591 IFPSI*KKGRCVGWDEVVSRSPVLSRNGTTSRVPVAHLVCNQTPLVGKKPTLM 749
            +FP   K      W  +    P   R     + PVA ++CN T      P+L+
Sbjct:  407 LFPREGKYSHAAVWPLI----PGYERADGEKQYPVAAMLCNFTKPTPTTPSLL 455          
BLAST of EY666368 vs. ExPASy Swiss-Prot
Match: PMIP_COCIM (Mitochondrial intermediate peptidase OS=Coccidioides immitis GN=OCT1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 50/165 (30.30%), Postives = 83/165 (50.30%), Query Frame = 1
Query:  127 IDRILKLRLEKAKLLGYKNYAEVSMAMKMA-TVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDHWDISFWSER--LRESKYEINEEE--LRPYFSLPKVMDGLFNLAKTLFGIDIEPADGL-APVWNNDVRFYCVKDSSGSPNAYFYFDPYSRP 603
            ++ +L+ R E AKL G+ +YA ++++ KMA T +     LE L +++      ++  L +  K      A +L  WD +++  +   R S+   + E   L  +FS+  V+ GL  L   L+GI + P + L   +WN DVR   V D S    A  Y D ++RP
Sbjct:  315 LETLLQKRAELAKLAGFPSYAHMTLSDKMAKTPEAVVNFLEALNASNRGQVQDELSQLLAL-KQADVPSATQLQPWDHAYYVHQYSARHSRVRRSRESTLLPAFFSIGTVIQGLSRLFTRLYGIRLVPTETLPGEIWNPDVRRLDVVDESDRRLAVIYCDLFTRP 478          
BLAST of EY666368 vs. ExPASy Swiss-Prot
Match: PRTD_YEAST (Saccharolysin OS=Saccharomyces cerevisiae GN=PRD1 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 6.928e-11
Identity = 58/211 (27.49%), Postives = 96/211 (45.50%), Query Frame = 1
Query:    1 ITLDAPSFMSVMQHAKNRVLREEVYRAYVSRASSGDLDNTPIIDRILKLRLEKAKLLGYKNYAEVSMAMKMA----TVDKAFELLEKLQSASWDPAVQDMEDLKSFSKSQGALEADKLDH-WDISFWSERLRESKYEINEEELRPYFSLPKVMDGLFNLAKTLFGID-IEPADGL-APVWNNDVRFYCV--KDSSGSPN--AYFYFDPYSR 600
            +T   P    VM+ A +   R++ + A  ++      +N  I+   LKLR E A LLGY  YA  ++  KMA    TV      L+          +Q ++D+K+    +    AD   + WD  ++  +     + ++ E++  YF L   + G+  + +TLF +  IE  D     VW++DV+   V   D   SPN   + YFD + R
Sbjct:  240 VTFKYPDIFPVMKLASSAQTRKQAFLADQNKVP----ENEAILLDTLKLRDELASLLGYDTYANYNLYDKMAEDSTTVMNFLNDLKDKLIPLGRKELQVLQDMKAEDVKKLNQGADPNYYIWDHRYYDNKYLLENFNVDLEKISEYFPLEATITGMLEIYETLFNLKFIETKDSQNKSVWHDDVKQIAVWNMDDPKSPNFVGWIYFDLHPR 446          

HSP 2 Score: 25.7942 bits (55), Expect = 6.928e-11
Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  675 TTSRVPVAHLVCNQTPLVGKKPTLMK 752
            TT   PV  LVCN +     KP+L+K
Sbjct:  467 TTRSYPVTALVCNFSKSTKDKPSLLK 492          
The following BLAST results are available for this feature:
BLAST of EY666368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
PMIP1_CRYNE2.367e-1128.35Mitochondrial intermediate peptidase 1 OS=Cryptoco... [more]
PMIP_NEUCR5.273e-1126.61Mitochondrial intermediate peptidase OS=Neurospora... [more]
PMIP_ASPNC5.273e-1130.39Mitochondrial intermediate peptidase OS=Aspergillu... [more]
PMIP_SCHPO5.328e-1126.73Mitochondrial intermediate peptidase OS=Schizosacc... [more]
THOPL_DICDI5.347e-1125.24Thimet-like oligopeptidase OS=Dictyostelium discoi... [more]
PMIP_COCIM6.886e-1130.30Mitochondrial intermediate peptidase OS=Coccidioid... [more]
PRTD_YEAST6.928e-1127.49Saccharolysin OS=Saccharomyces cerevisiae GN=PRD1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-017-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666368 ID=EY666368; Name=EY666368; organism=Citrus sinensis; type=EST; length=856bp
ATTACATTGGACGCTCCAAGTTTTATGTCCGTCATGCAACATGCTAAAAA
TCGTGTTTTGCGTGAGGAAGTCTATCGAGCTTATGTGAGTCGTGCCTCCA
GTGGTGATTTGGACAATACACCAATCATTGACCGAATATTGAAGCTTAGG
TTGGAAAAGGCTAAACTTCTCGGTTACAAAAACTATGCTGAGGTGAGCAT
GGCAATGAAAATGGCTACTGTTGACAAAGCATTTGAGCTGCTAGAAAAGC
TTCAGAGTGCTTCCTGGGACCCTGCAGTTCAAGACATGGAAGACCTTAAA
AGTTTTTCCAAAAGTCAAGGTGCATTAGAAGCTGACAAATTGGACCATTG
GGACATCAGTTTTTGGAGTGAGAGACTTCGTGAGTCAAAATATGAGATCA
ATGAGGAAGAACTTCGGCCATATTTCTCATTGCCAAAAGTTATGGATGGC
CTTTTCAATCTTGCGAAGACACTTTTTGGAATCGATATCGAACCGGCTGA
TGGTCTAGCTCCTGTTTGGAACAATGATGTCAGATTCTATTGTGTCAAAG
ATTCTTCAGGTAGTCCAAATGCATACTTCTATTTTGATCCATATTCCCGT
CCATCTGAAAAAAAGGGAGGTGCGTGGGATGGGATGAGGTTGTTTCTCGA
AGTCCTGTTCTGTCACGCAACGGGACTACGTCGAGGGTACCTGTTGCCCA
CTTGGTGTGCAATCAAACCCCCCTGGTGGGGAAAAAGCCAACCCTTATGA
AATTTCCTGGAGGTTGAAAAATGTTTTCCATGAATTTTGGCCTTGGCCTT
CAACATATTTTGACACCAACGGGGATGAAAAACCTAATTTGGTGGGATTC
CCGGGG
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