EY666350

Overview
NameEY666350
Unique NameEY666350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.645e-40
Identity = 91/171 (53.22%), Postives = 113/171 (66.08%), Query Frame = 2
Query:  281 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGIIT 793
            +VAINGFGRIGR   R  + RK+  +EVVAIND    K  +HLLKYDS    F   V+    + + VDGK I+V +  +P  LPW DLG+D VIE TGVF +RE A  H+QAGAKKV+ITAP KG+  T V+G N D  KP+  IIS AS  TN + P VK L +KFGI++
Sbjct:    3 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYT-ENSLIVDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPIVKVLHEKFGIVS 172          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5)

HSP 1 Score: 166.007 bits (419), Expect = 2.148e-40
Identity = 88/172 (51.16%), Postives = 115/172 (66.86%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EAIISNASLPTNCLGPFVKGLDQKFGII 790
            +KV INGFGRIGRN  R     K+  +EVVA+ND       +HLLKYDS  G  +A+V  V  + + V+GK I V + R+P NL WG++G+D+V+E TG F  RE A KH++AGAKKV+I+AP K +  T V+GVN D Y P    +ISNAS  TNCL PF K L ++FGI+
Sbjct:    3 VKVGINGFGRIGRNVFRA--ALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVS-VNGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIV 171          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_CHLPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia pneumoniae GN=gap PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.251e-40
Identity = 93/171 (54.39%), Postives = 117/171 (68.42%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EAIISNASLPTNCLGPFVKGLDQKFGI 787
            +KV INGFGRIGR  LR    +++S +EV+AIND       ++L K+DST G F  DV+    D + V  + IQ +S RN  NLPW DLG+DLVIE TG+F  +E A KHIQAGAK+VLI+APGKGDIPT+V+GVN   + P+ + +ISNAS  TNCL P  K L   FGI
Sbjct:    1 MKVVINGFGRIGRLVLRQIL-KRNSSVEVLAINDLVPGDALTYLFKFDSTHGRFPEDVR-CEADHLIVGKRKIQFLSERNVQNLPWKDLGVDLVIECTGLFTKKEDAEKHIQAGAKRVLISAPGKGDIPTFVMGVNHKTFNPEKDFVISNASCTTNCLAPIAKVLLDNFGI 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.251e-40
Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            +KVAING+GRIGRN LR  + G K   LE+VAIND G     +HL +YD+  G F  +V   G D   V+G  I+V++ RNP  LPWG+LG+D+V+E TG+F  +E A  H++ GAKKV+I+APG  D+  T V GVN    K  + +ISNAS  TNCL P VK L +K G++
Sbjct:    3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAINDLGNAATNAHLTQYDTVHGRFPGEVSVDG-DAFRVNGDRIRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHGVLKATDTVISNASCTTNCLAPLVKPLHEKLGVV 174          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.393e-39
Identity = 85/173 (49.13%), Postives = 114/173 (65.90%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            +KVAING+GRIGRN LR  + G K   +E+VAIND G     +HL +YD+  G F  +V   G D   V+G  I+V++ RNP  LPWG+LG+D+V+E TG+F  +E A  H++ GAKKV+I+APG  D+  T V GVN    K  + +ISNAS  TNCL P VK L +K G++
Sbjct:    3 IKVAINGYGRIGRNVLRAHYEGGKRHDIEIVAINDLGNAATNAHLTQYDTVHGRFPGEVSVDG-DAFRVNGDRIRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLRGGAKKVIISAPGGKDVDATIVYGVNHGVLKATDTVISNASCTTNCLAPLVKPLHEKLGLV 174          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.819e-39
Identity = 87/171 (50.88%), Postives = 113/171 (66.08%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            ++V INGFGRIGR   R    R D  +E+V IND       +++LKYDST G FE  V+  G   + V+GK I+V S R+P NL W ++ +D+V+E TG+F+  + A KHIQAGAKKV+IT P K D P +V+GVN   YK  EAI+SNAS  TNCL P  K L+ KFGI+
Sbjct:    3 IRVGINGFGRIGRVVFRAAQRRND--IEIVGINDLLDADYMAYMLKYDSTHGRFEGAVEVQG-GALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYK-GEAIVSNASCTTNCLAPLAKVLNDKFGIV 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.102e-39
Identity = 91/171 (53.22%), Postives = 113/171 (66.08%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            + V INGFGRIGR  LR    RKD  +++VAIND     + AS++ KYDST G +  +V   G + I +DGK I+V   R+PVN+PWG  G+D VI+ TGVF + + A KHI AGAKKV+ITAP     P +VVGVN D Y PD  IISNAS  TNCL P  K ++ KFGI
Sbjct:    3 ITVGINGFGRIGRLVLRIALSRKD--IQIVAINDPFIAPEYASYMFKYDSTHGRYSGEVSHEG-ENIVIDGKKIRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAP-SSTAPMFVVGVNEDKYTPDLNIISNASCTTNCLAPLAKIINNKFGI 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_BACCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus coagulans GN=gap PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.540e-38
Identity = 90/174 (51.72%), Postives = 115/174 (66.09%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EAIISNASLPTNCLGPFVKGLDQKFGIIT 793
            +KV INGFGRIGRN  R     K+  +EVVA+ND T      +HLLKYDS  G  +A+V  V  DG+SV+GK I V + RNP NL WG++G+D+V+E TG F  RE A KH++AGAKKV+I+AP K +  T V+GVN D Y  D   +ISNAS  T CL  F + L Q FG ++
Sbjct:    3 VKVGINGFGRIGRNVFRA--AVKNPDIEVVAVNDLTANADGLAHLLKYDSVHGRLDAEV--VVNDGVSVNGKEIIVKAERNPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKVENITVVMGVNQDKYDADAHHVISNASCTTICLAAFARVLHQIFGEVS 172          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 159.844 bits (403), Expect = 1.540e-38
Identity = 90/175 (51.43%), Postives = 111/175 (63.43%), Query Frame = 2
Query:  272 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD--IPTYVVGVNADAYKPD-EAIISNASLPTNCLGPFVKGLDQKFGI 787
            AKLKV INGFGRIGR  LR   G  +  +E V IND       ++LLKYDST G   + V+    DGI +DG  I  VS RNP  LPWG LG D V+E TG+F D EGA KH+QAGAK+V+I+AP K    + T +VGVN D + P  + I+SNAS  TNCL P  K ++  FG+
Sbjct:    2 AKLKVGINGFGRIGRLVLRA--GINNPNIEFVGINDLVPPDNLAYLLKYDSTHGKLRSQVE-AKDDGIVIDGHFIPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDPSKDVIVSNASCTTNCLAPIAKVINDNFGL 173          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.626e-38
Identity = 90/171 (52.63%), Postives = 111/171 (64.91%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            + V INGFGRIGR  LR    R D  ++VVAIND     + A+++ KYDST   ++ +V   G   I++DGK I V   R+PVN+PWG  G+D VIE TGVF   EGA KHI AGAKKV+ITAP K D P +VVGVN + Y  D  I+SNAS  TNCL P  K ++  FGI
Sbjct:    3 ITVGINGFGRIGRLVLRVALSRAD--IKVVAINDPFIAPEYAAYMFKYDSTHKAYKGEVSASGNK-INIDGKEITVFQERDPVNIPWGKAGVDYVIESTGVFTTLEGAQKHIDAGAKKVVITAPSK-DAPMFVVGVNEEKYTSDLNIVSNASCTTNCLAPLAKVVNDTFGI 169          
The following BLAST results are available for this feature:
BLAST of EY666350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_THEMA1.645e-4053.22Glyceraldehyde-3-phosphate dehydrogenase OS=Thermo... [more]
G3P_BACST2.148e-4051.16Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P_CHLPN6.251e-4054.39Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3PP_RALEH6.251e-4049.71Glyceraldehyde-3-phosphate dehydrogenase, plasmid ... [more]
G3PC_RALEH1.393e-3949.13Glyceraldehyde-3-phosphate dehydrogenase, chromoso... [more]
G3PC_TRYBB1.819e-3950.88Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_PICCI3.102e-3953.22Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_BACCO1.540e-3851.72Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P1_ANAVT1.540e-3851.43Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_PICPA2.626e-3852.63Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-021-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666350 ID=EY666350; Name=EY666350; organism=Citrus sinensis; type=EST; length=794bp
CCACGCGTCCGGGCTTAGCTCAGCTTAGCGACCACTGCTTGCTCTTGCTT
GCATCATCCAGCAAATACCTATCATGGCTTCGGCCACTCTCTCTGTAGCC
AAATCAGCTCTTCAGGGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCT
ACGCAACTCTGCAAGCCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCC
ATTCAGTCATTGCTCTCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGG
TACAGGAAGGTTGCTGCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTT
TGGTAGAATTGGTAGGAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACT
CTCCACTTGAAGTCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGGCC
TCTCACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGATGT
TAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCAGG
TTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATC
GACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGG
CAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCA
AGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAG
CCAGATGAGGCCATCATCAGCAATGCTTCTTTGCCAACCAACTGCCTTGG
CCCATTCGTCAAGGGTCTTGACCAAAAATTTGGCATTATCACGG
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