EY666350

Overview
NameEY666350
Unique NameEY666350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.220e-35
Identity = 82/171 (47.95%), Postives = 110/171 (64.33%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            +KV INGFGRIGR   R    +K S +E+VAIND       +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNAS  TNCL P  K ++  FGII
Sbjct:    3 IKVGINGFGRIGRIVFRA--AQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQD-IVSNASCTTNCLAPLAKVINDNFGII 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.220e-35
Identity = 82/171 (47.95%), Postives = 110/171 (64.33%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            +KV INGFGRIGR   R    +K S +E+VAIND       +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNAS  TNCL P  K ++  FGII
Sbjct:    3 IKVGINGFGRIGRIVFRA--AQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQD-IVSNASCTTNCLAPLAKVINDNFGII 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.593e-35
Identity = 86/176 (48.86%), Postives = 111/176 (63.07%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFV----DREGAGKHIQ-AGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            +K+AINGFGRIGRN  +    R    +++VAIND    K  +HLLKYDST G++   V+    DG I VDG+ I++++ R+P NLPW  LGID+VIE TGVF     D+ G   H+  AGAKKV++T P K +I T V+GVN      D   +SNAS  TNCL P  K L + FGI
Sbjct:    1 MKLAINGFGRIGRNVFKIAFERG---IDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVE--SRDGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGI 171          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.593e-35
Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 2
Query:  281 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAY-KPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            K+ INGFGRIGRN  R      +S +EVVAIND    K  +HLLKYD+  G   A+V     + I V+GK I+V++ R+P  LPW D G+++V+E TG F  +  A KH+    KKV+I+AP   +  T V+GVN + Y   +  ++SNAS  TNCL PF K L++KFG+
Sbjct:    3 KIGINGFGRIGRNVFRA--ALNNSEVEVVAINDLTDAKTLAHLLKYDTVHGTLNAEVS-ANENSIVVNGKEIKVIAERDPAQLPWSDYGVEVVVESTGRFTKKSDAEKHLGGSVKKVIISAPASDEDITVVMGVNHEQYDAANHNVVSNASCTTNCLAPFAKVLNEKFGV 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_CLOAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium acetobutylicum GN=gap PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.081e-35
Identity = 83/169 (49.11%), Postives = 106/169 (62.72%), Query Frame = 2
Query:  281 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            K+AINGFGRIGR  LR     +   LEVVAIND    K  +HL KYDS+ G F  +++ V      V+GK ++V +  +P  LPWGDLGID+V+E TG F  +E A  H++AGAKKV+I+AP   D+ T V  VN +     E +IS AS  TNCL P  K L+ KFGI
Sbjct:    3 KIAINGFGRIGRLALR--RILEVPGLEVVAINDLTDAKMLAHLFKYDSSQGRFNGEIE-VKEGAFVVNGKEVKVFAEADPEKLPWGDLGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISAPAGNDLKTIVFNVNNEDLDGTETVISGASCTTNCLAPMAKVLNDKFGI 168          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.081e-35
Identity = 84/171 (49.12%), Postives = 114/171 (66.67%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            + +AINGFGRIGR  LR    RK+  ++VVAIND    V  A+++ KYDST G ++ +V   G++ I ++GK + V   ++P  LPWG LG+D+ ++ TGVF + + A KHI AGAKKV+ITAP K   P +VVGVN D Y   E I+SNAS  TNCL P  K ++ +FGI
Sbjct:    2 VSIAINGFGRIGRLVLRIALERKN--IDVVAINDPFISVDYAAYMFKYDSTHGKYKGEVSHDGSNLI-INGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAPSK-TAPMFVVGVNEDKYN-GEKIVSNASCTTNCLAPIAKIINDEFGI 167          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_KLEPN (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Klebsiella pneumoniae GN=gap PE=3 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.718e-35
Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 2
Query:  290 INGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            INGFGRIGR   R    +K S +E+VAIND    +  +++LKYDST G F+  V+ V    + V+GK I+V + R+P NL W ++G+D+V E TG+F+  E A KHI AGAKKV++T P K + P +V G N DAY   + I+SNAS  TNCL P  K ++  FGI+
Sbjct:    1 INGFGRIGRIVFRA--AQKRSDIEIVAINDLLDAEYMAYMLKYDSTHGRFDGTVE-VKDGHLVVNGKKIRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFDAYAGQD-IVSNASCTTNCLAPLAKVINDNFGIV 163          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.550e-35
Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            +K+AINGFGRIGRN +R  +     + +++VAIN+    +  +HLLKYD++ G F   VK +G D ISV G  I +    NP  LPW  LG+D+V+E TGV+  RE A  H+ AGAKKVL + P   D+  T V G+N D  KP+  I+SN S  TNC+ P +K LD  FGI
Sbjct:    3 IKLAINGFGRIGRNIVRALYESGLSNEIKIVAINELADPEAIAHLLKYDTSHGRFFFPVK-LGEDTISVAGDAIALFCEPNPAELPWKTLGVDVVLECTGVYHSREHAQLHLTAGAKKVLFSHPADNDVDATIVYGINDDELKPEHTIVSNGSCTTNCVVPVIKVLDDAFGI 173          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_CLOPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium pasteurianum GN=gap PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.636e-35
Identity = 83/169 (49.11%), Postives = 106/169 (62.72%), Query Frame = 2
Query:  281 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            KVAINGFGRIGR  LR     +   LEVVAIND    K  +HL KYDS+ G F  +++ V      V+GK ++V +  +P  LPWG+LGID+V+E TG F  +E A  H++AGAKKV+I+AP   D+ T V  VN +     E +IS AS  TNCL P  K L+ KFGI
Sbjct:    3 KVAINGFGRIGRLALR--RILEVPGLEVVAINDLTDAKMLAHLFKYDSSQGRFNGEIE-VKEGAFVVNGKEVKVFAEADPEKLPWGELGIDVVLECTGFFTKKEKAEAHVRAGAKKVVISAPAGNDLKTIVFNVNNEDLDGTETVISGASCTTNCLAPMAKVLNDKFGI 168          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.055e-35
Identity = 85/172 (49.42%), Postives = 105/172 (61.05%), Query Frame = 2
Query:  281 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDG--ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EAIISNASLPTNCLGPFVKGLDQKFGI 787
            ++AINGFGRIGRN LR    R DS L+VVA+ND       + LL YD+T G      +PV  +G  + VDG+ I V + R P NLPW +LG+D+V+E TG F   + A  H+ AGAKKVL++AP  G   T   GVN DAY PD   I+SNAS  TN L P  K LD   GI
Sbjct:    3 RIAINGFGRIGRNVLRALLER-DSDLDVVAVNDLTEPATLARLLAYDTTSGRLG---RPVTVEGNVLVVDGRRITVTAEREPANLPWAELGVDIVLEATGRFTSAKAARAHLDAGAKKVLVSAPADGADITLAFGVNTDAYDPDLHTIVSNASCTTNALAPLAKVLDDLAGI 170          
The following BLAST results are available for this feature:
BLAST of EY666350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P1_ECOL61.220e-3547.95Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECO571.220e-3547.95Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P_BORBU1.593e-3548.86Glyceraldehyde-3-phosphate dehydrogenase OS=Borrel... [more]
G3P1_BACCE1.593e-3545.88Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Baci... [more]
G3P_CLOAB2.081e-3549.11Glyceraldehyde-3-phosphate dehydrogenase OS=Clostr... [more]
G3P1_KLUMA2.081e-3549.12Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_KLEPN2.718e-3547.90Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
E4PD_PSEHT3.550e-3547.09D-erythrose-4-phosphate dehydrogenase OS=Pseudoalt... [more]
G3P_CLOPA4.636e-3549.11Glyceraldehyde-3-phosphate dehydrogenase OS=Clostr... [more]
G3P_STRAU6.055e-3549.42Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-021-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666350 ID=EY666350; Name=EY666350; organism=Citrus sinensis; type=EST; length=794bp
CCACGCGTCCGGGCTTAGCTCAGCTTAGCGACCACTGCTTGCTCTTGCTT
GCATCATCCAGCAAATACCTATCATGGCTTCGGCCACTCTCTCTGTAGCC
AAATCAGCTCTTCAGGGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCT
ACGCAACTCTGCAAGCCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCC
ATTCAGTCATTGCTCTCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGG
TACAGGAAGGTTGCTGCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTT
TGGTAGAATTGGTAGGAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACT
CTCCACTTGAAGTCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGGCC
TCTCACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGATGT
TAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCAGG
TTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATC
GACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGG
CAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCA
AGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAG
CCAGATGAGGCCATCATCAGCAATGCTTCTTTGCCAACCAACTGCCTTGG
CCCATTCGTCAAGGGTCTTGACCAAAAATTTGGCATTATCACGG
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