EY666350

Overview
NameEY666350
Unique NameEY666350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.055e-35
Identity = 79/174 (45.40%), Postives = 110/174 (63.22%), Query Frame = 2
Query:  272 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            A +KV INGFGRIGR   R  +  +   +E+VA+ND     K A+++LKYDST GIF  ++K  G D + ++GK ++  + R+P  +PW + G D V+E TGVF   + A  H+Q GAKKV+I+AP   D P YV+ VN  +Y     +ISNAS  TNCL P  K ++ KFGI+
Sbjct:    2 APIKVGINGFGRIGRIVFR--NAIEHPEVEIVAVNDPFIETKYAAYMLKYDSTHGIFNGEIKQEGND-LVINGKTVKFYTERDPAAIPWKETGADYVVESTGVFTTTDKAKAHLQGGAKKVIISAP-SADAPMYVMVVNEKSYDGSADVISNASCTTNCLAPLAKVINDKFGIV 171          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.055e-35
Identity = 85/171 (49.71%), Postives = 112/171 (65.50%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            +KVAING G+IGR  +R    R +  +EVVAIND    V  A+++ KYDST G +  DV+  G   + +DGK I+V   R+P  LPWG+ GID+ I+ TGVF + + A KHI AGAKKV+ITAP     P +V+GVN + Y   E I+SNAS  TNCL P  K +D++FGI
Sbjct:    2 VKVAINGLGKIGRLVMRIALSRAN--VEVVAINDPFITVDYAAYMFKYDSTHGKYAGDVQYEGNT-LVIDGKKIKVFQERDPAQLPWGEEGIDIAIDSTGVFKELDSAQKHIDAGAKKVVITAP-SSTAPMFVMGVNEEKY-AGETIVSNASCTTNCLAPLAKVIDEQFGI 167          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.055e-35
Identity = 86/171 (50.29%), Postives = 107/171 (62.57%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            +++AINGFGRIGR  LR    R  S +EVVA+ND       A+++ KYDST G +  +V       I +DGK I V   R+P NLPWG   ID+ I+ TGVF + + A KHI AGAKKV+ITAP     P +VVGVN D Y  D  I+SNAS  TNCL P  K +D+ FGI
Sbjct:    2 VRIAINGFGRIGRLVLRVALSR--SNIEVVAVNDPFITTDYAAYMFKYDSTHGRYAGEVTH-DDKHIIIDGKKIAVHQERDPANLPWGSENIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAP-SSTAPMFVVGVNEDKYTSDLKIVSNASCTTNCLAPLAKVIDEAFGI 168          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=TDH1 PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 6.055e-35
Identity = 84/171 (49.12%), Postives = 108/171 (63.16%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            +++AINGFGRIGR  LR    RKD  +EVVA+ND       A++++KYDST G ++  V       I +DG  I     R+P NLPWG L ID+ ++ TGVF + + A KHI AGAKKV+ITAP     P +VVGVN   Y PD+ I+SNAS  TNCL P  K ++  FGI
Sbjct:    2 IRIAINGFGRIGRLVLRLALQRKD--IEVVAVNDPFISNDYAAYMVKYDSTHGRYKGTVSH-DDKHIIIDGVKIATYQERDPANLPWGSLKIDVAVDSTGVFKELDTAQKHIDAGAKKVVITAP-SSSAPMFVVGVNHTKYTPDKKIVSNASCTTNCLAPLAKVINDAFGI 168          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_PSEAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa GN=gap PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34
Identity = 81/171 (47.37%), Postives = 106/171 (61.99%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            +++AINGFGRIGRN LR  + G     L+VVAIND G     +HL +YDS  G F  +V+    + + V G  I V + RNP  LPW  LG+D+V+E TG+F  R+ A  H+QAGA KVLI+APGK    T V GVN +  +    I+SNAS  TNCL P  + L ++ GI
Sbjct:    3 IRLAINGFGRIGRNVLRALYTGHYREQLQVVAINDLGDAAVNAHLFQYDSVHGHFPGEVEH-DAESLRVMGDRIAVSAIRNPAELPWKSLGVDIVLECTGLFTSRDKAAAHLQAGAGKVLISAPGKDVEATVVYGVNHEVLRASHRIVSNASCTTNCLAPVAQVLHRELGI 172          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34
Identity = 79/171 (46.20%), Postives = 113/171 (66.08%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            +K+ INGFGRIGR   R    R  S +E++AIND   V+  +++LKYDS  G F   +  +  + + V+GK I++ + ++P NL WGDL ID+VIE TG+F+  E + KHIQAGAKKV+IT+P K + P +V GVN + Y   + I+SNAS  TNCL P  K ++ +F I+
Sbjct:    3 IKIGINGFGRIGRVLFRLAQLR--SNIEILAINDLINVQYIAYMLKYDSIHGNFNGKIV-IKNETLFVNGKKIRITNEKDPKNLMWGDLNIDVVIESTGIFLTTEDSYKHIQAGAKKVIITSPPKDNTPMFVRGVNFNEY-VGQKIVSNASCTTNCLAPLAKVINDEFEIV 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Candida glabrata GN=GPD1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34
Identity = 86/171 (50.29%), Postives = 106/171 (61.99%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQ-ASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            ++VAINGFGRIGR  LR     K   ++VVAIND       A+++ KYDST G ++ +V     D I +DGK I+    R+P +LPWGD  ID+VIE TGVF  ++ A KHI AGAKKV+IT P     P +V GVN D Y  D  +ISNAS  TNCL P  K L   FGI
Sbjct:    2 VRVAINGFGRIGRIVLRI--AMKRDGIDVVAINDPFITNDYAAYMFKYDSTHGRYDGEVTHDDKDLI-IDGKAIKCYQERDPADLPWGDNDIDIVIEATGVFTAKDLAEKHITAGAKKVVITGP-SATAPMFVKGVNDDKYTSDVTVISNASCTTNCLAPLAKVLQDNFGI 168          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.301e-34
Identity = 80/170 (47.06%), Postives = 105/170 (61.76%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            +KVAINGFGRIGRN LR       + +EVVAIND G V+  +HL ++DS  G F  +VK  G D I V    I+V + RNP  LP  +LG+D+ +E TG+F  R+ A  H+ AGAK+VL++AP  G   T V GVN +    +  ++SNAS  TNCL P  K L+   GI
Sbjct:    3 VKVAINGFGRIGRNVLRAIIESGRTDIEVVAINDLGPVETNAHLFRFDSVHGRFPGEVKVAG-DTIDVGRGPIKVTAVRNPAELPHKELGVDIALECTGIFTSRDKAAAHLAAGAKRVLVSAPADGADLTVVYGVNHEKLTNEHLVVSNASCTTNCLAPVAKVLNDAVGI 171          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.005e-34
Identity = 81/171 (47.37%), Postives = 105/171 (61.40%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EAIISNASLPTNCLGPFVKGLDQKFGI 787
            +KV INGFGRIGR   R  H R    +EV  IND    K  +HLLKYDS    F  +V       + VDGK I+  + ++P  +PW + G+ +VIE TGVF D + A  H++ GAKKV+ITAP KG+  T V+GVN +AY P    IISNAS  TN L P +K L++ FG+
Sbjct:    1 MKVGINGFGRIGRQVFRILHSRG---VEVALINDLTDNKTLAHLLKYDSIYHRFPGEVA-YDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGV 167          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.005e-34
Identity = 78/172 (45.35%), Postives = 110/172 (63.95%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            +KV INGFGRIGR   R  +  +   +E+VA+ND     K A ++LKYDST G+F+  ++  G+D I V+GK ++  + R+P  +PW D G + ++E TGVF   E A  H++ GAK+V+I+AP   D P YV+GVN   Y    A+ISNAS  TNCL P  K ++ KFGI+
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFKGTIQVSGSDLI-VNGKTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAP-SADAPMYVMGVNEKTYDGKAAVISNASCTTNCLAPLAKVVNDKFGIV 170          
The following BLAST results are available for this feature:
BLAST of EY666350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_COLGL6.055e-3545.40Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_ASHGO6.055e-3549.71Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3P2_CANGA6.055e-3550.29Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Cand... [more]
G3P1_YEAST6.055e-3549.12Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Sacc... [more]
G3P_PSEAE1.033e-3447.37Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudo... [more]
G3P_BUCBP1.033e-3446.20Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3P1_CANGA1.033e-3450.29Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Cand... [more]
G3P_XANFL2.301e-3447.06Glyceraldehyde-3-phosphate dehydrogenase OS=Xantho... [more]
G3P_THEAQ3.005e-3447.37Glyceraldehyde-3-phosphate dehydrogenase OS=Thermu... [more]
G3P_PODAN3.005e-3445.35Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-021-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666350 ID=EY666350; Name=EY666350; organism=Citrus sinensis; type=EST; length=794bp
CCACGCGTCCGGGCTTAGCTCAGCTTAGCGACCACTGCTTGCTCTTGCTT
GCATCATCCAGCAAATACCTATCATGGCTTCGGCCACTCTCTCTGTAGCC
AAATCAGCTCTTCAGGGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCT
ACGCAACTCTGCAAGCCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCC
ATTCAGTCATTGCTCTCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGG
TACAGGAAGGTTGCTGCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTT
TGGTAGAATTGGTAGGAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACT
CTCCACTTGAAGTCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGGCC
TCTCACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGATGT
TAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCAGG
TTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATC
GACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGG
CAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCA
AGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAG
CCAGATGAGGCCATCATCAGCAATGCTTCTTTGCCAACCAACTGCCTTGG
CCCATTCGTCAAGGGTCTTGACCAAAAATTTGGCATTATCACGG
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