EY666350

Overview
NameEY666350
Unique NameEY666350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.948e-33
Identity = 80/175 (45.71%), Postives = 107/175 (61.14%), Query Frame = 2
Query:  272 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            +++ + INGFGRIGR   R  +    +   VVAIND    ++   ++LKYDST G+F  D+     DG + V+GK I V + ++P N+PWG  G   V+E TGVF   + A  HI+ GAKKV+I+AP   D P YV GVN DAY P   ++SNAS  TNCL P  K +  KFGI+
Sbjct:    2 SQVNIGINGFGRIGRIVFR--NSVVHNTANVVAINDPFIDLEYMVYMLKYDSTHGVFNGDIST--KDGKLIVNGKSIAVFAEKDPSNIPWGQAGAHYVVESTGVFTTIDKASAHIKGGAKKVVISAP-SADAPMYVCGVNLDAYDPKAQVVSNASCTTNCLAPLAKVIHDKFGIV 171          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.948e-33
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 2
Query:  272 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            A  KV INGFGRIGR   R  +  +   +++VA+ND     + A+++LKYDST G F+ D+K V +DG+ V+GK ++  + R+P N+PW +     V+E TGVF   E A  H++ GAKKV+I+AP   D P YV+GVN + Y  +  +ISNAS  TNCL P  K ++ +F II
Sbjct:    2 APTKVGINGFGRIGRIVFR--NAIEHDDIDIVAVNDPFIETEYAAYMLKYDSTHGQFKGDIK-VLSDGLEVNGKKVKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAP-SADAPMYVMGVNNETYNGEADVISNASCTTNCLAPLAKVINDEFTII 171          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.948e-33
Identity = 79/175 (45.14%), Postives = 108/175 (61.71%), Query Frame = 2
Query:  272 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDG-KVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            AK+K+ INGFGRIGR   R    R D  +E+VA+ND    V+  +++ KYDS  G ++        D   + G K + V   RNP  +PWG+ G D V+E TGVF D++ A  H++ GAKKV+I+AP K D P +VVGVN   YK D  ++SNAS  TNCL P  K ++ +FGI+
Sbjct:    2 AKIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISVEYMTYMFKYDSVHGQWKHHELKAKDDKTLLFGEKPVTVFGIRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEKEYKSDLTVVSNASCTTNCLAPLAKVINDRFGIV 173          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.948e-33
Identity = 81/170 (47.65%), Postives = 103/170 (60.59%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            ++VAINGFGRIGRN LR       + +EVVAIND G V+  +HLL++DS  G F A V   G D I V    I+V + RNP  LPW   G+D+ +E TG+F  +E A  H+Q GAK+VL++AP  G   T V GVN      D+ ++SNAS  TNCL P  K L    GI
Sbjct:    3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAINDLGQVETNAHLLRFDSVHGRFPAKVTS-GDDWIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVYGVNHATLTADDLVVSNASCTTNCLSPVAKVLHDAIGI 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33
Identity = 80/172 (46.51%), Postives = 106/172 (61.63%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            +KV INGFGRIGR  LR  +  +   LEVVA+ND    +    ++ KYDST G F+  V+ V    + ++ K I V   ++P N+ WG+ G + V+E TGVF   E AG H++ GAKKV+I+AP   D P +V GVN DAYKP+  I+SNAS  TNCL P  K +   F II
Sbjct:    3 VKVGINGFGRIGRIVLR--NAIEHGDLEVVAVNDPFIDLDYMVYMFKYDSTHGRFKGSVE-VKDGKLYINNKAIAVFGEKDPANIKWGEAGAEYVVESTGVFTTTEKAGVHLKGGAKKVVISAP-SADAPMFVCGVNLDAYKPEYQIVSNASCTTNCLAPLAKVIHDNFTII 170          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33
Identity = 81/172 (47.09%), Postives = 106/172 (61.63%), Query Frame = 2
Query:  281 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            KV INGFGRIGR  LR  +  +   ++VVAIND    +    ++ KYDST G F+  V+    DG + ++GK I V   R+P  +PWG  G D V+E TGVF   E A  H++ GAKKV+I+AP   D P +V GVN +AYKP+  +ISNAS  TNCL P  K +   FGI+
Sbjct:    4 KVGINGFGRIGRIVLR--NALEHGDIDVVAINDPFIDLDYMVYMFKYDSTHGRFKGKVET--KDGKLVIEGKPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAP-SADAPMFVCGVNLEAYKPEYEVISNASCTTNCLAPLAKVIHDNFGIV 170          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33
Identity = 82/181 (45.30%), Postives = 110/181 (60.77%), Query Frame = 2
Query:  260 VAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIF---EADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            + +  K+K+ INGFGRIGR   R    R D  +E+V +ND        S++ KYDS  G +   E +VK   T  +    K + V   RNP  +PWG++G + V+E TGVF D+E A  H++AGAKKV+I+AP K D P +VVGVN   YK D  I+SNAS  TNCL P  K ++ KFGI+
Sbjct:    1 MGSTGKIKIGINGFGRIGRLVARVALTRDD--IELVGVNDPFISTDYMSYMFKYDSVHGKWKHHEVNVKDSKT--LLFGEKSVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKEKASAHLKAGAKKVVISAPSK-DAPMFVVGVNEHQYKSDVNIVSNASCTTNCLAPLAKVINDKFGIV 176          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG--DIPTYVVGVNADAYKPD-EAIISNASLPTNCLGPFVKGLDQKFGII 790
            LK+ INGFGRIGR   R      +  + +V IND       ++L KYDST G +   V     +GI +D + I   S RNP  LPWGDLG D V+E TG+F     A  H++AGAK+V+I+AP K    IPT+VVGVN   Y  D + I+SNAS  TNCL P  K LD  FGI+
Sbjct:    2 LKIGINGFGRIGRLVARI--AMANPQVTLVGINDLVPASNLAYLFKYDSTHGSYGGTVV-AKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVGVNHLNYNADTDKIVSNASCTTNCLAPIAKILDDNFGIV 172          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P1_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhizomucor racemosus GN=GPD1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33
Identity = 80/172 (46.51%), Postives = 107/172 (62.21%), Query Frame = 2
Query:  278 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGI 787
            ++V INGFGRIGR  LR     KD  ++VVAIND    +    ++LKYD+  G F+  V+    DG + V+G  I V + R+P ++PWG  G D V+E TGVF   E A  H++ GAKKV+I+AP   D P +V GVN +AYK +  +ISNAS  TNCL P  K ++  FGI
Sbjct:    3 VQVGINGFGRIGRIVLRATESNKD--VQVVAINDPFIPLDYMVYMLKYDTVHGRFDGSVE--AKDGKLVVNGHAIAVSAERDPTSIPWGSAGADYVVESTGVFTTTEAASAHLKGGAKKVIISAP-SADAPMFVCGVNLEAYKSEYKVISNASCTTNCLAPLAKVINDNFGI 169          
BLAST of EY666350 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33
Identity = 77/174 (44.25%), Postives = 110/174 (63.22%), Query Frame = 2
Query:  272 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEAIISNASLPTNCLGPFVKGLDQKFGII 790
            A +KV INGFGRIGR   R  +  +   +EVVA+ND     + A+++LKYDST G F  D++ V  DG+ V+ + ++  + RNP  +PW + G + ++E TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN  +Y  D  +ISNAS  TNCL P  K ++ +F II
Sbjct:    2 APIKVGINGFGRIGRIVFR--NAAQSCEVEVVAVNDPFIEPEYAAYMLKYDSTHGQFNGDIQTV-EDGLVVNSRNVKFYNKRNPEEIPWAETGAEYIVESTGVFTTTEKAKAHLKGGAKKVIISAP-SADAPMFVMGVNHKSYTTDLEVISNASCTTNCLAPLAKVINDEFTII 171          
The following BLAST results are available for this feature:
BLAST of EY666350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_USTMA1.948e-3345.71Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P_SCLSC1.948e-3344.83Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3PC_PETHY1.948e-3345.14Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P2_RHOSH1.948e-3347.65Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhod... [more]
G3P_CRYNE2.544e-3346.51Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_CRYCU2.544e-3347.09Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3PC_PINSY2.544e-3345.30Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P1_SYNY32.544e-3347.13Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Syne... [more]
G3P1_RHIRA2.544e-3346.51Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhiz... [more]
G3P_ERYGR3.322e-3344.25Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-021-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666350 ID=EY666350; Name=EY666350; organism=Citrus sinensis; type=EST; length=794bp
CCACGCGTCCGGGCTTAGCTCAGCTTAGCGACCACTGCTTGCTCTTGCTT
GCATCATCCAGCAAATACCTATCATGGCTTCGGCCACTCTCTCTGTAGCC
AAATCAGCTCTTCAGGGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCT
ACGCAACTCTGCAAGCCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCC
ATTCAGTCATTGCTCTCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGG
TACAGGAAGGTTGCTGCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTT
TGGTAGAATTGGTAGGAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACT
CTCCACTTGAAGTCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGGCC
TCTCACCTCCTCAAGTACGACTCCACCCTTGGCATCTTTGAAGCCGATGT
TAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCAGG
TTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTGGGCATC
GACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGG
CAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCA
AGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAG
CCAGATGAGGCCATCATCAGCAATGCTTCTTTGCCAACCAACTGCCTTGG
CCCATTCGTCAAGGGTCTTGACCAAAAATTTGGCATTATCACGG
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