CX676410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676410 vs. ExPASy Swiss-Prot
Match: PIN3B_ORYSJ (Putative auxin efflux carrier component 3b OS=Oryza sativa subsp. japonica GN=PIN3B PE=3 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 8.393e-47 Identity = 104/184 (56.52%), Postives = 130/184 (70.65%), Query Frame = 3 Query: 3 GIPLLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSLGPCSLPALTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHSDFYSMMGVQGFPGGRLSNFGPADMYSV-QSSRGPTPRPSNFEENS 551 GIPLL++MYG YSG LMVQ+VVLQ I+WYTLLLFLFE+R A++LI QFP+TAASI + VD DVVSL+G E AE+ DG+L + V +S+ SRRS + A TPR SNLTG EIYS+SSSRN TPRGS F +D R S+FG AD++S+ SSR TPRPS+F+E++ Sbjct: 123 GIPLLVSMYGPYSGDLMVQIVVLQSIVWYTLLLFLFEFRAARVLIAAQFPDTAASIAAVHVDPDVVSLEGSQ-AEAHAEVAPDGRLRMVVCRSSVSRRS----AAAAATPRASNLTGVEIYSISSSRNATPRGSTFTLADIPGHQPPNS--ALRASSFGAADLFSLHSSSRQHTPRPSSFDEHA 299
BLAST of CX676410 vs. ExPASy Swiss-Prot
Match: PIN6_ARATH (Probable auxin efflux carrier component 6 OS=Arabidopsis thaliana GN=PIN6 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.257e-34 Identity = 91/200 (45.50%), Postives = 121/200 (60.50%), Query Frame = 3 Query: 3 GIPLLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFP-ETAASIVSFKVDSDVVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSLGPCSLPALTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHS-DFYS----MMGVQGFPGG-------------RLSNFGPADMYSVQSSRGPTPRPSNFEE 545 GIPLL AMYG+Y+ +LMVQ+VVLQCIIWYTLLLFLFE R A++LI +FP + A SI +VD DV+SLDG D L T+ E +G++ + +R+S +S S LTPR SNL+ AEI+S+++ N G + + FY+ +M G GG RLS + +D YS+Q PTPR SNF E Sbjct: 117 GIPLLQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDDDVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCLTPRASNLSNAEIFSVNTPNNRFFHGGGGSGTLQFYNGSNEIMFCNGDLGGFGFTRPGLGASPRRLSGYASSDAYSLQ----PTPRASNFNE 312 The following BLAST results are available for this feature:
BLAST of CX676410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676410 ID=CX676410; Name=CX676410; organism=Citrus sinensis; type=EST; length=654bpback to top |