EY666248

Overview
NameEY666248
Unique NameEY666248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGR_ARATH (Geranylgeranyl pyrophosphate synthase-related protein, chloroplastic OS=Arabidopsis thaliana GN=GGR PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.732e-34
Identity = 74/165 (44.85%), Postives = 101/165 (61.21%), Query Frame = 3
Query:  213 FQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLA-GGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDR--VVRAITELGFALGSKGVLKGTSHDLDSG 698
            F    Y T+   ++++ LDEA+P++HP  I+EAMRYS+LA G KR  PV+C+A+CEL GGD     P ACALEM H  SLIHDDLP +D+D +RRGK +NHTV+G               F+H+ + T      R  ++R ITE+   +GS G+  G   DL+ G
Sbjct:   45 FDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGG 209          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_BACST (Geranyltranstransferase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.268e-26
Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 3
Query:  222 EEYMTSKSRKVDKALDEALP-MQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRV-VRAITELGFALGSKGVLKGTSHDLDSGRK 704
            E+++  + + V+ AL   +  ++ P K+ +AM YSL AGGKRIRP+L +++   +G D ++ +P+ACA+EM HT SLIHDDLP++DNDDLRRGK TNH VFGE              F+ +           V +R I  L  A G +G++ G + D++   K
Sbjct:    7 EQFLNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGK 169          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_BACSU (Geranyltranstransferase OS=Bacillus subtilis GN=ispA PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.244e-24
Identity = 63/174 (36.21%), Postives = 99/174 (56.90%), Query Frame = 3
Query:  210 TFQFEEYMTSKSRKVDKALD---EALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGG-STDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSE 719
            T +   ++  + + ++  L    E L M  P+ + ++M YSL AGGKR+RP++ +A     G  E   +P+ CA+EM HT SLIHDDLP +D+DDLRRGK TNH VFGE T            F+ + +      S ++ +R + EL  A G++G++ G   D+++  ++V  E
Sbjct:    2 TNKLTSFLADRKKTIENQLSVYTEKLDM--PDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLE 173          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_MICLU (Geranyltranstransferase OS=Micrococcus luteus GN=fps PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.747e-21
Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  222 EEYMTSKSRKVDKALDEALPMQHP--EKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRK 704
            +E +T     ++   +  L   HP   ++HEA+ YSL AGGKRIRP+L + + + +GG+    +P   ALEM HT SLIHDDLPA+DNDD RRGK TNH  F E T            F+ +       + +  +  I  L  A GS G++ G   D+    K
Sbjct:    3 QEKLTMNRDFLNLINESLLNKYHPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCIL--NTQLNAEIKLSLINLLSTASGSNGMVYGQMLDMQGEHK 163          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_HAEIN (Geranyltranstransferase OS=Haemophilus influenzae GN=ispA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.574e-19
Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 3
Query:  219 FEEYMTSKSRKVDKALDEALP--MQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEV 710
            F E +     ++++ L+        H   + EAM+Y+LL GGKR+RP L  A+ +++G ++  +   A A+E  H  SLIHDDLPA+D+D+LRRG  T H  F E T            FE +  KT   ST++ +  I  L    G +G+  G S DL S  K++
Sbjct:    4 FSEELQQVQTRINRFLEAQFEGIESHNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE-ILTKTPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQI 168          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_RHISN (Probable geranyltranstransferase OS=Rhizobium sp. (strain NGR234) GN=NGR_a02750 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.513e-17
Identity = 58/166 (34.94%), Postives = 89/166 (53.61%), Query Frame = 3
Query:  222 EEYMTSKSRKVDKALDEALPMQ-HPE-KIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVK 713
            E +M + +++V++AL   L  + H E ++  AMRY+ L GGKR R +LC+A+  L      ++  +  A+EM H  +L+HDDLPA+D+D LRRG  T H  FGE T            F  +A+    G  D  +  + EL  A+ ++G   G + DL    K V+
Sbjct:   34 EIWMQNGAKRVEQALARLLCAEDHGETELMAAMRYATLHGGKRTRALLCLAAGALADTPAHILDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLDAPG--DNRIALVRELAQAVSAEGAAGGQAMDLSLVGKHVE 197          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: CRTE_PANAN (Geranylgeranyl pyrophosphate synthetase OS=Pantoea ananas GN=crtE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.599e-17
Identity = 57/159 (35.85%), Postives = 87/159 (54.72%), Query Frame = 3
Query:  252 VDKALDEALPMQ-HPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESL--VMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSE 719
            +D+ LD+ LP++   + +  AMR   LA GKRIRP+L + +   +G   S   ++ +ACA+EM H  SLI DD+P +D+  LRRG+ T H+ +GE              F  V A   G +     RA++EL  A+G +G+++G   DL  G K   +E
Sbjct:   23 IDRRLDQLLPVEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAF-GVIADADGLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAE 180          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_BRAJA (Probable geranyltranstransferase OS=Bradyrhizobium japonicum GN=fppS PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.312e-17
Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 3
Query:  222 EEYMTSKSRKVDKALDEALPMQHP--EKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVK 713
            E +M   +++V++AL   L  +     ++  AMRY+ L GGKR R +LC+A+  L      ++  +  A+EM H  +L+HDDLPA+D+D LRRG  T H  FGE T            F  +A+    G  D  +  + EL  A+ ++G   G + DL    K V+
Sbjct:   34 EIWMQDGAKRVEEALARLLCAEDDGETELMAAMRYATLHGGKRTRALLCLAAGALADTPAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLNAPG--DSPIALVRELAQAVSAEGAAGGQAIDLSLVGKHVE 197          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_AQUAE (Geranyltranstransferase OS=Aquifex aeolicus GN=ispA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.312e-17
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 3
Query:  225 EYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGE 527
            E + +   K++K L+E L  + PE++ EAM+Y  L  GKRIRP+  +A    +GG+E   + +   +E+ H  SLIHDDLP +DND  RRG  T H  FGE
Sbjct:    2 ERIETWKEKIEKRLNEILKPEGPEELIEAMKYYPLQKGKRIRPLFTVAVASALGGNEDDAITVGSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGE 102          
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: CRTE_ESCVU (Geranylgeranyl pyrophosphate synthetase OS=Escherichia vulneris GN=crtE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17
Identity = 59/171 (34.50%), Postives = 89/171 (52.05%), Query Frame = 3
Query:  246 RKVDKALDEALPMQHPEKIHE-AMRYSLLAGGKRIRPVLCIASCELVG--GDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEVKSEGNWSTILLAT 749
            + +D  L   LP    + I   AMR  ++A GKRIRP+L + +   +   G    ++ +ACA+E+THT SL+ DD+P +DN +LRRG+ T H  FGE              F  +AA TG    +R  +A+ EL  A+G +G++ G   DL+    +   +   ST  L T
Sbjct:   20 QSIDDHLAGLLPETDSQDIVSLAMREGVMAPGKRIRPLLMLLAARDLRYQGSMPTLLDLACAVELTHTASLMLDDMPCMDNAELRRGQPTTHKKFGESVAILASVGLLSKAFGLIAA-TGDLPGERRAQAVNELSTAVGVQGLVLGQFRDLNDAALDRTPDAILSTNHLKT 189          
The following BLAST results are available for this feature:
BLAST of EY666248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
GGR_ARATH1.732e-3444.85Geranylgeranyl pyrophosphate synthase-related prot... [more]
ISPA_BACST2.268e-2639.88Geranyltranstransferase OS=Bacillus stearothermoph... [more]
ISPA_BACSU1.244e-2436.21Geranyltranstransferase OS=Bacillus subtilis GN=is... [more]
ISPA_MICLU3.747e-2138.04Geranyltranstransferase OS=Micrococcus luteus GN=f... [more]
ISPA_HAEIN1.574e-1935.54Geranyltranstransferase OS=Haemophilus influenzae ... [more]
ISPA_RHISN2.513e-1734.94Probable geranyltranstransferase OS=Rhizobium sp. ... [more]
CRTE_PANAN5.599e-1735.85Geranylgeranyl pyrophosphate synthetase OS=Pantoea... [more]
ISPA_BRAJA7.312e-1733.73Probable geranyltranstransferase OS=Bradyrhizobium... [more]
ISPA_AQUAE7.312e-1743.56Geranyltranstransferase OS=Aquifex aeolicus GN=isp... [more]
CRTE_ESCVU9.550e-1734.50Geranylgeranyl pyrophosphate synthetase OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-015-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666248 ID=EY666248; Name=EY666248; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGCCTAGCTGTACCCATTCAGCTCTCCTCAAGAACTCCCCA
CTCAATTATTTCAAAATGCCCTTTATGATCCCATTTCCGAACTTGAAACC
CTTTCCCATGAAAAATAACGCCTGCCACGCTGAAAACTTAGCTTCGGTAA
AACCATCCCAGGGTGCAGAATCGATCATGAACATCAAGCCGGTAAAGATA
GCTCTACCAACTTTCCAGTTTGAAGAATACATGACCAGCAAGTCGAGAAA
AGTGGACAAAGCATTAGATGAGGCATTGCCCATGCAACATCCAGAAAAAA
TACACGAGGCCATGAGATACTCTCTTCTCGCTGGAGGCAAGCGTATCCGT
CCTGTTCTATGCATTGCTTCATGCGAATTAGTAGGAGGAGATGAGTCCTT
GGTGATGCCAATGGCTTGTGCACTAGAGATGACTCACACGATGTCCCTCA
TTCATGATGATCTCCCTGCACTGGACAACGATGATCTTAGACGAGGGAAA
GCTACAAATCACACAGTCTTTGGTGAACGAACCGCAATTCTTGCAGGTGA
TGCTCTGCTTGCCCTTGCATTTGAACATGTAGCAGCCAAGACCGGTGGTG
GGTCAACTGACCGCGTGGTTCGAGCCATTACAGAACTGGGGTTCGCACTT
GGGAGCAAAGGGGTCCTGAAAGGAACAAGTCATGACCTTGACAGTGGAAG
GAAGGAAGTGAAGTCTGAAGGGAATTGGAGTACCATCCTGTTGGCCACAA
ACCGCGGAACCTTATAGAAGCATCCGGGGGGTAGGGGGAGGGATAATCCG
AAGGGGGAGAGGAGATTGGAAAGAAAAGAAGTTCAAACCAGTGCGAGGGG
GCAGAGAATTATACAATCAAACGTGGCGAAGGGTGGGTGTAGAAGAAACA
AGAGGGCACGAAGGTGCAAGCGGAGGAATCTCG
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