EY666248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_ECOLI (Geranyltranstransferase OS=Escherichia coli (strain K12) GN=ispA PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16 Identity = 59/168 (35.12%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 219 FEEYMTSKSRKVDKALDE---ALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDR-VVRAITELGFALGSKGVLKGTSHDLDSGRKEV 710 F + + + ++ ++AL LP Q+ + E M+Y L GGKR+RP L A+ + G + + A A+E H SLIHDDLPA+D+DDLRRG T H FGE F ++ +DR + I+EL A G G+ G + DLD+ K V Sbjct: 3 FPQQLEACVKQANQALSRFIAPLPFQNTPVV-ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHV 169
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_BUCAI (Geranyltranstransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ispA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.085e-16 Identity = 51/165 (30.91%), Postives = 94/165 (56.97%), Query Frame = 3 Query: 219 FEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVA-AKTGGGSTDRVVRAITELGFALGSKGVLKGTSHDLDSGRKEV 710 +E Y ++K+ L++ LP Q + +AM+YS+ +G KR+R L ++ ++ + + + ++ A+E H+ SLIHDDLP +DND+ RRGK + H +GE T F ++ + S + ++ I+EL +++GS G+ G + DL++ +K+V Sbjct: 7 YERYKHRINQKLFYTLNQ-LPFQKSSLL-KAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDV 169
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: ISPA_BUCAP (Geranyltranstransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ispA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15 Identity = 53/165 (32.12%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 219 FEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRV-VRAITELGFALGSKGVLKGTSHDLDSGRKEV 710 ++ Y ++K+ + + E LP Q + AM+YS L+GGKR+R L A+ E + + + ++ A+E+ H+ SLIHDDLP +DND RRGK + H +GE F ++ G D + ++ I E A+G G+ G DL+ RK++ Sbjct: 7 YDIYYNRINKKLFEIIQE-LPFQD-SVLFRAMKYSTLSGGKRLRACLIYATGETFQVNIAALDVISAAVELVHSYSLIHDDLPCIDNDYFRRGKISCHIKYGENFALLAGDALQGLAFNILSNSNMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDLEKERKKI 169
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: IDSA_METTM (Bifunctional short chain isoprenyl diphosphate synthase OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=idsA PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14 Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 243 SRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAI 629 S DK + E + P+ + +A + + AGGK+IRP L + SCE VGG+ +A A+E+ HT SLIHDD+ +D+D++RRG+ + H ++GE FE V G ++RV A+ Sbjct: 12 SEVADKRIMECISDITPDTLLKASEHLITAGGKKIRPSLALLSCEAVGGNPEDAAGVAAAIELIHTFSLIHDDI--MDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFEAVIR---NGDSERVKDAL 135
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: CRTE_RHOCA (Geranylgeranyl pyrophosphate synthetase OS=Rhodobacter capsulatus GN=crtE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14 Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 237 SKSRKVDKALDEALPMQ----HPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMAC-ALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALGSKG 662 S ++++ AL +AL + P + A+ Y + GG RIRP + ++ G D V A ALE+ H SL+HDDLPA DN D+RRGK + H + E FE V A G + DR ++ I++LG G++G Sbjct: 2 SLDKRIESALVKALSPEALGESPPLLAAALPYGVFPGGARIRPTILVSVALACGDDCPAVTDAAAVALELMHCASLVHDDLPAFDNADIRRGKPSLHKAYNEPLAVLAGDSLLIRGFE-VLADVGAVNPDRALKLISKLGQLSGARG 147
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: IDSA_METTH (Bifunctional short chain isoprenyl diphosphate synthase OS=Methanobacterium thermoautotrophicum GN=idsA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.291e-13 Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 243 SRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGE 527 S D+ + E++ PE + A + + AGGK+IRP L + S E VGGD +A A+E+ HT SLIHDD+ +D+D++RRG+ H ++GE Sbjct: 12 SEMADERIRESISDITPETLLRASEHLITAGGKKIRPSLALLSSEAVGGDPGDAAGVAAAIELIHTFSLIHDDI--MDDDEIRRGEPAVHVLWGE 104
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: IDSA_METJA (Bifunctional short chain isoprenyl diphosphate synthase OS=Methanocaldococcus jannaschii GN=idsA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.686e-13 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 246 RKVDKALDEALP--MQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGE 527 + + + +DE L + +K++ A ++ L AGGKRIRP L + + L D V+P A A+E+ H +LIHDD+ +DNDD RRGK T H V+GE Sbjct: 15 KNILQKIDEELKTYVDKDDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDDIEEVLPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGE 108
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: CRTE_RHOS4 (Geranylgeranyl pyrophosphate synthetase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=crtE PE=3 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 4.152e-12 Identity = 45/137 (32.85%), Postives = 65/137 (47.45%), Query Frame = 3 Query: 291 PEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDE-SLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGERTXXXXXXXXXXXXFEHVAAKTGGGSTDRVVRAITELGFALG-SKGVLKGTSHDLDS 695 P K+ A+ Y++ GG RIRP L ++ G D +L A ALE+ H SL+HDDLP D+ ++RRGK T H + E FE V A+ R ++ +T L G G+ G + +S Sbjct: 24 PSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHDDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFE-VLARAAADQPQRALQLVTALAVRTGMPMGICAGQGWESES 159
BLAST of EY666248 vs. ExPASy Swiss-Prot
Match: GGPS_SULSO (Geranylgeranyl pyrophosphate synthetase OS=Sulfolobus solfataricus GN=gds PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.578e-11 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 300 IHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKATNHTVFGE 527 + EA + AGGKR+RP++ ++S +L+GGD A A+E+ H +L+HDD+ +DND LRRG T H +GE Sbjct: 32 LEEASFHLFTAGGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVHVKWGE 105 The following BLAST results are available for this feature:
BLAST of EY666248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY666248 ID=EY666248; Name=EY666248; organism=Citrus sinensis; type=EST; length=933bpback to top |