EG358201

Overview
NameEG358201
Unique NameEG358201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length460
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5394 contig Csv1_Contig5394:1..458. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: DJC18_HUMAN (DnaJ homolog subfamily C member 18 OS=Homo sapiens GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 8.440e-15
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 271
            +K+YRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+F N FFGG  P
Sbjct:   99 KKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFEADITPEELF-NVFFGGHFP 185          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: DJC18_BOVIN (DnaJ homolog subfamily C member 18 OS=Bos taurus GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 8.440e-15
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 271
            +K+YRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+F N FFGG  P
Sbjct:   99 KKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFETDITPEELF-NVFFGGHFP 185          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: DJC18_MOUSE (DnaJ homolog subfamily C member 18 OS=Mus musculus GN=Dnajc18 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.102e-14
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQ-PRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPPA 274
            +K+Y+KL+LK HPDKN APGA EAFKA+  AF  LSN + R +YD  G ++  +  PR     AR ++ +  +++DI  EE+F N FFGG  P+
Sbjct:   99 KKAYKKLALKFHPDKNCAPGATEAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTVPR-----ARSYHYYKDFEADISPEELF-NVFFGGHFPS 186          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: DJC18_MACFA (DnaJ homolog subfamily C member 18 OS=Macaca fascicularis GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.471e-14
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY-QPRTHTRAARGFNGF--YDSDIDAEEIFRNFFFGGMPP 271
            +K+YRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +  PR     AR +N +  +++DI  EE+  N FFGG  P
Sbjct:   99 KKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTFTAPR-----ARPYNYYRDFEADITPEEL-SNVFFGGHFP 185          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: YNF5_SCHPO (Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe GN=SPBC17A3.05c PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.332e-14
Identity = 46/115 (40.00%), Postives = 62/115 (53.91%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAAR-----------GFNGFYDSDIDAEEIFRN------------FFFGGMPPAR 277
            +KSY+KL+L++HPDKN AP A+EAFK VSKAFQ LS+   R  YD TG D     P +   AA            GF+ +  +++  E++F +            FFFGG P  R
Sbjct:  130 KKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDRTGMD-----PESRASAASSSFSSNAGGHPGFSAYPQANMSPEDLFNSFFGDQFFSGPGTFFFGGGPGIR 239          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.921e-12
Identity = 47/115 (40.87%), Postives = 56/115 (48.70%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDAEEIFRNFFFGGMPPARTQFRHFNFGQGVATGTADRNGSD 346
            +KSYRKL+LK HPD+NK PGAEE FK +S+A+  LS+ E R +YD  G                G NG Y     AE+IFR   F G       F    FG         R GSD
Sbjct:   23 KKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDRFGH--------------AGINGQY----TAEDIFRGADFSGFGDIFEMF----FGGSRRGPRGPRRGSD 115          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: HLJ1_YEAST (Protein HLJ1 OS=Saccharomyces cerevisiae GN=HLJ1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.688e-12
Identity = 50/133 (37.59%), Postives = 65/133 (48.87%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDI---DAEEIFRNFFFGGM---PPARTQFRHFNFGQ--------GVATGTADRNGSDGFNL 358
            +K+YRKL++K+HPDKN  P A EAFK +++AF+ LSN+E R  YD  G D P  +      AA GF G           E++F N  FGG    PP       FN G         G +  T    G  GF +
Sbjct:   38 KKAYRKLAIKLHPDKNSHPKAGEAFKVINRAFEVLSNEEKRSIYDRIGRD-PDDRQMPSRGAASGFRGSAGGSPMGGGFEDMFFNSRFGGQRAGPPEDIFDFLFNAGGSPFGASPFGPSASTFSFGGPGGFRV 169          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.688e-12
Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA-EEIFRNFFFGG 262
            +K+YRKLS K HPD NK  GA+E FK +S+A++ LS++  R  YD  G D P        +   G  GF  SD    E+IF +FF GG
Sbjct:   22 KKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGP--------QGGFGSQGFGGSDFGGFEDIFSSFFGGG 101          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.688e-12
Identity = 39/96 (40.62%), Postives = 50/96 (52.08%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA---------EEIFRNFFFGG 262
            +K+YRKLS K HPD NK P A E FK + +A++ LS+D+ R  YD  G  +P           +GF GF   D D          E+IF  FF GG
Sbjct:   22 KKAYRKLSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQADP----------NQGFGGFRSDDFDLGGFSGFGGFEDIFNTFFGGG 107          
BLAST of EG358201 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12
Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = 2
Query:    2 RKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGFYDSDIDA-EEIFRNFFFGG 262
            +K+YRKLS K HPD NK  GA+E FK +S+A++ LS++  R  YD  G D P        +   G  GF  SD    E+IF +FF GG
Sbjct:   22 KKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYDQFGHDGP--------QGGFGSQGFGGSDFGGFEDIFSSFFGGG 101          
The following BLAST results are available for this feature:
BLAST of EG358201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DJC18_HUMAN8.440e-1548.39DnaJ homolog subfamily C member 18 OS=Homo sapiens... [more]
DJC18_BOVIN8.440e-1548.39DnaJ homolog subfamily C member 18 OS=Bos taurus G... [more]
DJC18_MOUSE1.102e-1446.81DnaJ homolog subfamily C member 18 OS=Mus musculus... [more]
DJC18_MACFA5.471e-1447.31DnaJ homolog subfamily C member 18 OS=Macaca fasci... [more]
YNF5_SCHPO9.332e-1440.00Uncharacterized J domain-containing protein C17A3.... [more]
DNAJ_METTE3.921e-1240.87Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
HLJ1_YEAST6.688e-1237.59Protein HLJ1 OS=Saccharomyces cerevisiae GN=HLJ1 P... [more]
DNAJ_STAES6.688e-1244.32Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_BACST6.688e-1240.63Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_STAEQ8.734e-1244.32Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

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Properties
Property NameValue
Genbank description6h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0006h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358201 ID=EG358201; Name=EG358201; organism=Citrus sinensis; type=EST; length=460bp
ACGGAAATCTTATAGAAAATTATCGCTGAAGGTTCATCCCGATAAGAACA
AAGCTCCAGGCGCCGAAGAAGCCTTTAAAGCGGTATCAAAGGCGTTTCAG
TGTTTGAGCAACGATGAGAGTCGGAAAAAATATGATATTACTGGGTCAGA
TGAGCCCGTTTATCAGCCACGGACTCATACTCGGGCCGCCCGTGGGTTTA
ACGGGTTTTATGATTCGGATATTGATGCTGAGGAGATTTTTAGGAACTTT
TTCTTCGGGGGAATGCCGCCAGCCAGGACTCAGTTTCGGCATTTTAATTT
CGGGCAGGGAGTGGCCACGGGAACGGCTGATCGTAATGGCTCCGATGGGT
TTAATTTACGTGCCTTGATTCAGTTGTTGCCTGTGATTTTGATAATTCTC
TTGCAGTTTTTGCCGTCTTCTGATCCAATTTATGCCTTGTCGAGGTCTTA
CCCTTATGAG
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