EG358200

Overview
NameEG358200
Unique NameEG358200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:1..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 5.778e-56
Identity = 107/153 (69.93%), Postives = 118/153 (77.12%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPN+VVF+NK                       Y+FPGD+VP+I GSAL+AL AL  NP IK GEN+WVDKIY LMD VDSYIP P+R  + PFL+A+EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNIVVFINKEDQVDDIELIELVELEVRETLQRYDFPGDEVPMIPGSALMALTALTDNPKIKPGENKWVDKIYNLMDIVDSYIPTPKRNIEKPFLMAIEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_ACAM1 (Elongation factor Tu OS=Acaryochloris marina (strain MBIC 11017) GN=tuf PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 7.546e-56
Identity = 103/153 (67.32%), Postives = 121/153 (79.08%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGA+LVVS ADGPMPQT+EHILLAKQVGVPN+VVF+NK                     + Y+FPGDD+PI+SGSAL+ALEAL    S+K+G+N+WVDKIY+LM+ VD+YIP P+R  D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAVLVVSAADGPMPQTREHILLAKQVGVPNIVVFMNKQDQVDDEELLELVELEVRELLNDYDFPGDDIPIVSGSALMALEALNGADSMKKGDNEWVDKIYKLMEEVDAYIPTPERDVDKPFLMAVEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_PHATR (Elongation factor Tu, chloroplastic OS=Phaeodactylum tricornutum GN=tufA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.287e-55
Identity = 103/153 (67.32%), Postives = 120/153 (78.43%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL+KQVGVPN+VVFLNK                     S+Y+FPGDD+PI  GSAL A+EA+ ANP++KRG+N+WVDKIY LMD+VD YIP P+R  +  FL+A+EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKQVGVPNIVVFLNKEDQVDDEELLELVELEVRELLSAYDFPGDDIPICPGSALQAIEAITANPTVKRGDNKWVDKIYALMDAVDEYIPTPERDVEKTFLMAIEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_NOSP7 (Elongation factor Tu OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tuf PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 1.681e-55
Identity = 104/153 (67.97%), Postives = 117/153 (76.47%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDG ILVV+  DGPMPQT+EHILLAKQVGVP++VVFLNK                     SSY+FPGDD+PII GS L ALEA+  NP  K+GEN WVDKIYELMD+VDS+IP P+R  D PFL+AVEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLAKQVGVPSLVVFLNKEDLMDDPELLELVELELRELLSSYDFPGDDIPIIKGSGLQALEAMTKNPKTKKGENPWVDKIYELMDAVDSFIPTPERDVDKPFLMAVEDVFTITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_HELSJ (Elongation factor Tu, plastid OS=Helicosporidium sp. subsp. Simulium jonesii GN=tufA PE=3 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 1.681e-55
Identity = 104/153 (67.97%), Postives = 121/153 (79.08%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILVVSGADGPMPQT+EHI+LAKQVGVP+MVVF+NK                     +SY+F G++VP+I+GSALLALEA + NP I +GEN WVDKIY LMDSVDSYIP P R+ D PFL+A+EDVFSI+GR
Sbjct:   82 CPGHADYIKNMITGAAQMDGAILVVSGADGPMPQTREHIVLAKQVGVPSMVVFINKEDQVDDPEILELVELEVRDLLTSYKFEGEEVPVITGSALLALEAFIKNPKILKGENPWVDKIYNLMDSVDSYIPTPVREIDKPFLMAIEDVFSISGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_EUGGR (Elongation factor Tu, chloroplastic OS=Euglena gracilis GN=tufA PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 2.196e-55
Identity = 106/153 (69.28%), Postives = 117/153 (76.47%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQTKEHILLAKQVGVPN+VVFLNK                     S+YEFPGDD+P+I GSALL++EAL  NP I +GEN+WVDKI  LMD VDSYIP P R T+  FL+A+EDV SITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVDDSELLELVELEIRETLSNYEFPGDDIPVIPGSALLSVEALTKNPKITKGENKWVDKILNLMDQVDSYIPTPTRDTEKDFLMAIEDVLSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_PORYE (Elongation factor Tu, chloroplastic OS=Porphyra yezoensis GN=tufA PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 4.891e-55
Identity = 103/153 (67.32%), Postives = 120/153 (78.43%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVP +VVFLNK                     S Y+FPGDD+P ++GSALLALEA+  NP+IK+GE++WVDKI+ LM++VD+YIP P+R  D  FL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPTLVVFLNKEDQVDDEELLELVELEGRELLSQYDFPGDDIPFVAGSALLALEAVTKNPAIKQGEDKWVDKIFSLMEAVDTYIPTPERDVDKTFLMAVEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_ASTLO (Elongation factor Tu, plastid OS=Astasia longa GN=tufA PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 4.891e-55
Identity = 104/153 (67.97%), Postives = 118/153 (77.12%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILV+S  DGPMPQTKEHILLAKQVGVPN+VVFLNK                     ++YEFPGD++PII+GSALLA+EAL  NP I +GEN+WVDKI +LMD +DSYIP P R TD  FLLA+EDV SITGR
Sbjct:   82 CPGHADYIKNMITGAAQMDGAILVISATDGPMPQTKEHILLAKQVGVPNLVVFLNKEDQIDDNELLELIELEIRETLNNYEFPGDEIPIITGSALLAIEALNKNPKIIKGENKWVDKILDLMDKIDSYIPTPIRDTDKDFLLAIEDVLSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 6.388e-55
Identity = 105/153 (68.63%), Postives = 117/153 (76.47%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVV+  DG MPQTKEHILLA+QVGVP++VVFLNK                     + YEFPGD+VPII GS L ALEA+ ANP   RGEN+WVDKIYELMD+VD+YIP P+R  D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVAATDGAMPQTKEHILLARQVGVPSIVVFLNKVDMVDDEELLELVELELRELLNEYEFPGDEVPIIRGSGLKALEAMTANPKTLRGENEWVDKIYELMDAVDNYIPTPERDVDKPFLMAVEDVFSITGR 234
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 8.343e-55
Identity = 104/153 (67.97%), Postives = 117/153 (76.47%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVPNMVVFLNK                     S Y+FPGD +P +SGSALLALE+L +NP + RGE++WVDKI  LMD+VD YIP P+R  D  FL+A+EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPNMVVFLNKEDQIDDADLLELVELEVRELLSKYDFPGDQIPFVSGSALLALESLSSNPKLMRGEDKWVDKILALMDAVDEYIPTPERPIDKSFLMAIEDVFSITGR 234
The following BLAST results are available for this feature:
BLAST of EG358200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_PROWI5.778e-5669.93Elongation factor Tu, plastid OS=Prototheca wicker... [more]
EFTU_ACAM17.546e-5667.32Elongation factor Tu OS=Acaryochloris marina (stra... [more]
EFTU_PHATR1.287e-5567.32Elongation factor Tu, chloroplastic OS=Phaeodactyl... [more]
EFTU_NOSP71.681e-5567.97Elongation factor Tu OS=Nostoc punctiforme (strain... [more]
EFTU_HELSJ1.681e-5567.97Elongation factor Tu, plastid OS=Helicosporidium s... [more]
EFTU_EUGGR2.196e-5569.28Elongation factor Tu, chloroplastic OS=Euglena gra... [more]
EFTU_PORYE4.891e-5567.32Elongation factor Tu, chloroplastic OS=Porphyra ye... [more]
EFTU_ASTLO4.891e-5567.97Elongation factor Tu, plastid OS=Astasia longa GN=... [more]
EFTU_THEEB6.388e-5568.63Elongation factor Tu OS=Thermosynechococcus elonga... [more]
EFTU_CYAPA8.343e-5567.97Elongation factor Tu, cyanelle OS=Cyanophora parad... [more]

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Properties
Property NameValue
Genbank description10d5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358200 ID=EG358200; Name=EG358200; organism=Citrus sinensis; type=EST; length=461bp
TGCCCTGGCCACGCCGATTATGTTAAGAATATGATTACTGGCGCTGCCCA
AATGGACGGTGCGATTTTGGTGGTGTCCGGTGCTGATGGGCCAATGCCAC
AAACTAAAGAACATATTTTGTTGGCTAAGCAAGTGGGTGTCCCTAACATG
GTTGTGTTTTTGAATAAACAGGACCAGGTTGATGATGAAGAGCTGTTGCA
ACTTGTGGAATTGGAGGTTCGTGAGTTACTTTCTTCTTATGAATTTCCTG
GTGATGATGTGCCTATTATTTCTGGTTCTGCGCTCTTAGCTTTAGAGGCT
TTGATGGCTAATCCTAGTATTAAGAGAGGAGAGAATCAATGGGTTGATAA
GATTTATGAGCTTATGGATTCTGTTGATAGTTACATTCCTATCCCACAAA
GACAAACTGATTTGCCCTTTTTGTTAGCTGTTGAAGATGTGTTTTCAATT
ACTGGTCGTGG
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