EG358200

Overview
NameEG358200
Unique NameEG358200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:1..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_HAES2 (Elongation factor Tu OS=Haemophilus somnus (strain 2336) GN=tuf PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.202e-42
Identity = 87/153 (56.86%), Postives = 101/153 (66.01%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVV+  DGPMPQT+EHILL +QVGVP ++VFLNK                     S Y+FPGDD PI+ GSAL AL           G  +W +KI EL   +D+YIP P+R  D PFLL +EDVFSI+GR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALQAL----------NGVAEWEEKILELASHLDNYIPEPERAIDQPFLLPIEDVFSISGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_HAES1 (Elongation factor Tu OS=Haemophilus somnus (strain 129Pt) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.202e-42
Identity = 87/153 (56.86%), Postives = 101/153 (66.01%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVV+  DGPMPQT+EHILL +QVGVP ++VFLNK                     S Y+FPGDD PI+ GSAL AL           G  +W +KI EL   +D+YIP P+R  D PFLL +EDVFSI+GR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALQAL----------NGVAEWEEKILELASHLDNYIPEPERAIDQPFLLPIEDVFSISGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GEMAT (Elongation factor Tu OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=tuf PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.202e-42
Identity = 87/153 (56.86%), Postives = 103/153 (67.32%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS  DGPMPQT+EHILLA+QV VP++VVFLNK                     S Y +PGDD P+I GSA+ A+           G+ +WV +  +L +++DSYIP P R+ D PFLL VEDVFSITGR
Sbjct:   88 CPGHADYVKNMITGAAQMDGAILVVSAVDGPMPQTREHILLARQVNVPSVVVFLNKCDLVEDEELLDLVELEVRELLSKYNYPGDDAPVIRGSAINAI----------NGDPKWVAEFMKLYEALDSYIPEPVREVDKPFLLPVEDVFSITGR 230          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_AZOSE (Elongation factor Tu OS=Azoarcus sp. (strain EbN1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.202e-42
Identity = 91/153 (59.48%), Postives = 105/153 (68.63%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILV S ADGPMPQT+EHILLA+QVGVP ++VFLNK                     S Y+FPGDDVPII GSAL ALE   ++     GE      I+ L +++DSYIP P+R  D PFLL +EDVFSI+GR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSKYDFPGDDVPIIKGSALKALEGDQSD----IGE----PAIFRLAEALDSYIPTPERAIDRPFLLPIEDVFSISGR 226          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCO (Elongation factor Tu-1 OS=Streptomyces coelicolor GN=tuf1 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.202e-42
Identity = 86/153 (56.21%), Postives = 102/153 (66.67%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILVV+  DGPMPQTKEH+LLA+QVGVP +VV LNK                     S YEFPGDDVP++  SAL ALE          G+ +W + + ELM +VD  IP P+R  D PFL+ +EDVF+ITGR
Sbjct:   84 CPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSEYEFPGDDVPVVKVSALKALE----------GDKEWGNSVLELMKAVDEAIPEPERDVDKPFLMPIEDVFTITGR 226          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_THENN (Elongation factor Tu OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=tuf PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 8.100e-42
Identity = 87/153 (56.86%), Postives = 107/153 (69.93%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILVV+  DGPMPQT+EH+LLA+QV VP M+VF+NK                     S YE+PGD+VP+I GSAL ALEA   +P+     ++    I EL+D++D+YIP PQR  D PFL+ +EDVFSITGR
Sbjct:   82 CPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVEVPYMIVFINKTDMVDDPELIELVEMEVRDLLSQYEYPGDEVPVIKGSALKALEA-PDDPN-----HEAYKPIQELLDAMDNYIPDPQRDVDKPFLMPIEDVFSITGR 228          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPX (Elongation factor Tu OS=Synechococcus sp. (strain WH8102) GN=tuf PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 8.100e-42
Identity = 90/153 (58.82%), Postives = 101/153 (66.01%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILV +  DGPM QTKEHILLAKQVGVP +VV LNK                      SY+FPGDD+P++  S L ALE          GE +W  KI ELM +VD  IP P+R+ D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVCAATDGPMAQTKEHILLAKQVGVPALVVALNKCDMVDDEEIIELVEMEVRELLDSYDFPGDDIPVVQVSGLKALE----------GEAEWEAKIEELMAAVDEAIPEPEREVDKPFLMAVEDVFSITGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_STROR (Elongation factor Tu OS=Streptococcus oralis GN=tuf PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 8.100e-42
Identity = 87/152 (57.24%), Postives = 106/152 (69.74%), Query Frame = 1
Query:    4 PGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            PGHADYVKNMITGAAQMDGAILVV+  DGPMPQT+EHILL++QVGV +++VF+NK                     S Y+FPGDD+P+I GSAL ALE          G++++ D I ELM++VD YIP P+R T+ P LL VEDVFSITGR
Sbjct:   86 PGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVKHLIVFMNKIDLVDDEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALE----------GDSKYEDIIMELMNTVDEYIPEPERDTEKPLLLPVEDVFSITGR 227          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_SHEPA (Elongation factor Tu OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 8.100e-42
Identity = 86/153 (56.21%), Postives = 104/153 (67.97%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVV+  DGPMPQT+EHILL++QVGVP ++VF+NK                     S Y+FPGDD+P+I GSAL ALE          GE +W  KI EL +++D+YIP P+R  D  F+L +EDVFSI GR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVPFIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALE----------GEPEWEAKILELAEALDTYIPEPERAIDGAFILPIEDVFSIAGR 224          
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_SHEHH (Elongation factor Tu OS=Shewanella halifaxensis (strain HAW-EB4) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 8.100e-42
Identity = 86/153 (56.21%), Postives = 104/153 (67.97%), Query Frame = 1
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVV+  DGPMPQT+EHILL++QVGVP ++VF+NK                     S Y+FPGDD+P+I GSAL ALE          GE +W  KI EL +++D+YIP P+R  D  F+L +EDVFSI GR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVPFIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALE----------GEPEWEAKILELAEALDTYIPEPERAIDGAFILPIEDVFSIAGR 224          
The following BLAST results are available for this feature:
BLAST of EG358200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_HAES26.202e-4256.86Elongation factor Tu OS=Haemophilus somnus (strain... [more]
EFTU_HAES16.202e-4256.86Elongation factor Tu OS=Haemophilus somnus (strain... [more]
EFTU_GEMAT6.202e-4256.86Elongation factor Tu OS=Gemmatimonas aurantiaca (s... [more]
EFTU_AZOSE6.202e-4259.48Elongation factor Tu OS=Azoarcus sp. (strain EbN1)... [more]
EFTU1_STRCO6.202e-4256.21Elongation factor Tu-1 OS=Streptomyces coelicolor ... [more]
EFTU_THENN8.100e-4256.86Elongation factor Tu OS=Thermotoga neapolitana (st... [more]
EFTU_SYNPX8.100e-4258.82Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_STROR8.100e-4257.24Elongation factor Tu OS=Streptococcus oralis GN=tu... [more]
EFTU_SHEPA8.100e-4256.21Elongation factor Tu OS=Shewanella pealeana (strai... [more]
EFTU_SHEHH8.100e-4256.21Elongation factor Tu OS=Shewanella halifaxensis (s... [more]

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Properties
Property NameValue
Genbank description10d5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358200 ID=EG358200; Name=EG358200; organism=Citrus sinensis; type=EST; length=461bp
TGCCCTGGCCACGCCGATTATGTTAAGAATATGATTACTGGCGCTGCCCA
AATGGACGGTGCGATTTTGGTGGTGTCCGGTGCTGATGGGCCAATGCCAC
AAACTAAAGAACATATTTTGTTGGCTAAGCAAGTGGGTGTCCCTAACATG
GTTGTGTTTTTGAATAAACAGGACCAGGTTGATGATGAAGAGCTGTTGCA
ACTTGTGGAATTGGAGGTTCGTGAGTTACTTTCTTCTTATGAATTTCCTG
GTGATGATGTGCCTATTATTTCTGGTTCTGCGCTCTTAGCTTTAGAGGCT
TTGATGGCTAATCCTAGTATTAAGAGAGGAGAGAATCAATGGGTTGATAA
GATTTATGAGCTTATGGATTCTGTTGATAGTTACATTCCTATCCCACAAA
GACAAACTGATTTGCCCTTTTTGTTAGCTGTTGAAGATGTGTTTTCAATT
ACTGGTCGTGG
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