EG358200

Overview
NameEG358200
Unique NameEG358200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:1..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BACSU (Elongation factor Tu OS=Bacillus subtilis GN=tuf PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 8.362e-47
Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL+K VGVP +VVFLNK                     S Y+FPGDDVP++ GSAL ALE          G+ +W  KI+ELMD+VD YIP P+R T+ PF++ VEDVFSITGR
Sbjct:   83 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVVKGSALKALE----------GDAEWEAKIFELMDAVDEYIPTPERDTEKPFMMPVEDVFSITGR 225
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU2_PELTS (Elongation factor Tu 2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 8.362e-47
Identity = 95/153 (62.09%), Postives = 110/153 (71.90%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VV+LNK                     S+YEFPGD++PII+GSAL A+E      +  + E +W   I+ELMD+VD YIP PQR  D PFL+ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVYLNKADMVDDPELLELVDMEVRELLSTYEFPGDEIPIITGSALKAMEC-----ACGKRECEWCKSIWELMDAVDEYIPTPQRAVDKPFLMPVEDVFSITGR 229
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU1_PELTS (Elongation factor Tu 1 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 8.362e-47
Identity = 95/153 (62.09%), Postives = 110/153 (71.90%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VV+LNK                     S+YEFPGD++PII+GSAL A+E      +  + E +W   I+ELMD+VD YIP PQR  D PFL+ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVYLNKADMVDDPELLELVDMEVRELLSTYEFPGDEIPIITGSALKAMEC-----ACGKRECEWCKSIWELMDAVDEYIPTPQRAVDKPFLMPVEDVFSITGR 229
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSW (Elongation factor Tu OS=Geobacillus sp. (strain WCH70) GN=tuf PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.092e-46
Identity = 94/153 (61.44%), Postives = 109/153 (71.24%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S Y+FPGD+VP+I GSAL ALE          G+ QW +KI ELM++VD YIP PQR+ D PF++ +EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALE----------GDPQWEEKIIELMNAVDEYIPTPQREIDKPFMMPIEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_SYNY3 (Elongation factor Tu OS=Synechocystis sp. (strain PCC 6803) GN=tuf PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.863e-46
Identity = 95/153 (62.09%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLAKQVGVP +VVFLNK                     S Y+FPGDD+PI++GSAL A+E          GE ++ D I ELM +VD YI  P+R+ D PFL+AVEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPKLVVFLNKKDMVDDEELLELVELEVRELLSDYDFPGDDIPIVAGSALKAIE----------GEKEYKDAILELMKAVDDYIDTPEREVDKPFLMAVEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_HELMI (Elongation factor Tu OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=tuf PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.863e-46
Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADY+KNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VV+LNK                     SSYEFPGDD+PI++GS L ALE         + E +W  KI+ LMD VD YIP P+R TD PFL+ VEDVF+ITGR
Sbjct:   82 CPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVWLNKADMVDDPELMELVEMEVRELLSSYEFPGDDIPIVAGSGLKALEC-----GCGKRECEWCGKIWALMDEVDKYIPTPERATDKPFLMPVEDVFTITGR 229
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BACLD (Elongation factor Tu OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tuf PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.863e-46
Identity = 95/153 (62.09%), Postives = 109/153 (71.24%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++ VGVP +VVFLNK                     S YEFPGDDVP+I GSAL ALE          G+ Q+ +KI+ELM +VD YIP P+R+TD PF++ VEDVFSITGR
Sbjct:   83 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRNVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYEFPGDDVPVIKGSALKALE----------GDAQYEEKIFELMAAVDEYIPTPERETDKPFMMPVEDVFSITGR 225
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_LISW6 (Elongation factor Tu OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=tuf PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     + YEFPGDD+P+I GSAL AL+          GE  W  KI ELM++VDSYIP P+R TD PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKALQ----------GEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_LISMO (Elongation factor Tu OS=Listeria monocytogenes GN=tuf PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     + YEFPGDD+P+I GSAL AL+          GE  W  KI ELM++VDSYIP P+R TD PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKALQ----------GEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_LISMH (Elongation factor Tu OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=tuf PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     + YEFPGDD+P+I GSAL AL+          GE  W  KI ELM++VDSYIP P+R TD PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKALQ----------GEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGR 224
The following BLAST results are available for this feature:
BLAST of EG358200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BACSU8.362e-4761.44Elongation factor Tu OS=Bacillus subtilis GN=tuf P... [more]
EFTU2_PELTS8.362e-4762.09Elongation factor Tu 2 OS=Pelotomaculum thermoprop... [more]
EFTU1_PELTS8.362e-4762.09Elongation factor Tu 1 OS=Pelotomaculum thermoprop... [more]
EFTU_GEOSW1.092e-4661.44Elongation factor Tu OS=Geobacillus sp. (strain WC... [more]
EFTU_SYNY31.863e-4662.09Elongation factor Tu OS=Synechocystis sp. (strain ... [more]
EFTU_HELMI1.863e-4661.44Elongation factor Tu OS=Heliobacterium modesticald... [more]
EFTU_BACLD1.863e-4662.09Elongation factor Tu OS=Bacillus licheniformis (st... [more]
EFTU_LISW62.433e-4661.44Elongation factor Tu OS=Listeria welshimeri serova... [more]
EFTU_LISMO2.433e-4661.44Elongation factor Tu OS=Listeria monocytogenes GN=... [more]
EFTU_LISMH2.433e-4661.44Elongation factor Tu OS=Listeria monocytogenes ser... [more]

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Properties
Property NameValue
Genbank description10d5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358200 ID=EG358200; Name=EG358200; organism=Citrus sinensis; type=EST; length=461bp
TGCCCTGGCCACGCCGATTATGTTAAGAATATGATTACTGGCGCTGCCCA
AATGGACGGTGCGATTTTGGTGGTGTCCGGTGCTGATGGGCCAATGCCAC
AAACTAAAGAACATATTTTGTTGGCTAAGCAAGTGGGTGTCCCTAACATG
GTTGTGTTTTTGAATAAACAGGACCAGGTTGATGATGAAGAGCTGTTGCA
ACTTGTGGAATTGGAGGTTCGTGAGTTACTTTCTTCTTATGAATTTCCTG
GTGATGATGTGCCTATTATTTCTGGTTCTGCGCTCTTAGCTTTAGAGGCT
TTGATGGCTAATCCTAGTATTAAGAGAGGAGAGAATCAATGGGTTGATAA
GATTTATGAGCTTATGGATTCTGTTGATAGTTACATTCCTATCCCACAAA
GACAAACTGATTTGCCCTTTTTGTTAGCTGTTGAAGATGTGTTTTCAATT
ACTGGTCGTGG
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