EG358200

Overview
NameEG358200
Unique NameEG358200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6850 contig Csv1_Contig6850:1..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_LISMF (Elongation factor Tu OS=Listeria monocytogenes serotype 4b (strain F2365) GN=tuf PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     + YEFPGDD+P+I GSAL AL+          GE  W  KI ELM++VDSYIP P+R TD PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKALQ----------GEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_LISMC (Elongation factor Tu OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=tuf PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     + YEFPGDD+P+I GSAL AL+          GE  W  KI ELM++VDSYIP P+R TD PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKALQ----------GEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_LISIN (Elongation factor Tu OS=Listeria innocua GN=tuf PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVF+NK                     + YEFPGDD+P+I GSAL AL+          GE  W  KI ELM++VDSYIP P+R TD PF++ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKALQ----------GEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BACST (Elongation factor Tu OS=Bacillus stearothermophilus GN=tuf PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 93/153 (60.78%), Postives = 109/153 (71.24%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S Y+FPGD+VP+I GSAL ALE          G+ +W +KI ELM++VD YIP PQR+ D PF++ +EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALE----------GDPKWEEKIIELMNAVDEYIPTPQREVDKPFMMPIEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BACCN (Elongation factor Tu OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=tuf PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 94/153 (61.44%), Postives = 107/153 (69.93%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDG ILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S YEFPGDD+P++ GSAL ALE          G+ +W  KI ELM  VD+YIP P+R+TD PFL+ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYEFPGDDIPVVKGSALKALE----------GDAEWEAKIVELMAEVDAYIPTPERETDKPFLMPVEDVFSITGR 224
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU2_CARHZ (Elongation factor Tu 2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 95/153 (62.09%), Postives = 107/153 (69.93%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VVFLNK                     S+YEFPGD+VP+++GSAL ALE         + +  W  KI ELMD VD YIP PQR  D PFL+ VEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKADMVDDPELMELVEMEVRDLLSTYEFPGDEVPVVAGSALKALEC-----GCGKEDCPWCGKILELMDKVDEYIPTPQRDVDKPFLMPVEDVFTITGR 229
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU1_THETN (Elongation factor Tu-A OS=Thermoanaerobacter tengcongensis GN=tufA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 96/153 (62.75%), Postives = 106/153 (69.28%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VVFLNK                     + YEFPGDD PI+ GSAL ALE         + E QW  KI+ELMD VD YIP P+R  D PFL+ VEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKADMVDDPELIELVEMEVRDLLNQYEFPGDDTPIVVGSALKALEC-----GCGKRECQWCGKIWELMDVVDEYIPTPERDIDKPFLMPVEDVFTITGR 229
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU1_CARHZ (Elongation factor Tu 1 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.433e-46
Identity = 95/153 (62.09%), Postives = 107/153 (69.93%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VVFLNK                     S+YEFPGD+VP+++GSAL ALE         + +  W  KI ELMD VD YIP PQR  D PFL+ VEDVF+ITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKADMVDDPELMELVEMEVRDLLSTYEFPGDEVPVVAGSALKALEC-----GCGKEDCPWCGKILELMDKVDEYIPTPQRDVDKPFLMPVEDVFTITGR 229
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU2_THETN (Elongation factor Tu-B OS=Thermoanaerobacter tengcongensis GN=tufB PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.178e-46
Identity = 96/153 (62.75%), Postives = 106/153 (69.28%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDGAILVVS ADGPMPQT+EHILLA+QVGVP +VVFLNK                     + YEFPGD+ PI+ GSAL ALE         + E QW  KI+ELMD VD YIP P+R  D PFL+ VEDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKADMVDDPELIELVEMEVRDLLNQYEFPGDETPIVVGSALKALEC-----GCGKRECQWCGKIWELMDVVDEYIPTPERDIDKPFLMPVEDVFSITGR 229
[Close]
BLAST of EG358200 vs. ExPASy Swiss-Prot
Match: EFTU_BACWK (Elongation factor Tu OS=Bacillus weihenstephanensis (strain KBAB4) GN=tuf PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.150e-46
Identity = 93/153 (60.78%), Postives = 107/153 (69.93%), Query Frame = 1 
Query:    1 CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGR 459
            CPGHADYVKNMITGAAQMDG ILVVS ADGPMPQT+EHILL++QVGVP +VVFLNK                     S Y FPGDD+P+I GSAL AL+          GE +W +KI ELM  VD+YIP P+R+TD PFL+ +EDVFSITGR
Sbjct:   82 CPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYGFPGDDIPVIKGSALKALQ----------GEAEWEEKIIELMTEVDAYIPTPERETDKPFLMPIEDVFSITGR 224
The following BLAST results are available for this feature:
BLAST of EG358200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_LISMF2.433e-4661.44Elongation factor Tu OS=Listeria monocytogenes ser... [more]
EFTU_LISMC2.433e-4661.44Elongation factor Tu OS=Listeria monocytogenes ser... [more]
EFTU_LISIN2.433e-4661.44Elongation factor Tu OS=Listeria innocua GN=tuf PE... [more]
EFTU_BACST2.433e-4660.78Elongation factor Tu OS=Bacillus stearothermophilu... [more]
EFTU_BACCN2.433e-4661.44Elongation factor Tu OS=Bacillus cereus subsp. cyt... [more]
EFTU2_CARHZ2.433e-4662.09Elongation factor Tu 2 OS=Carboxydothermus hydroge... [more]
EFTU1_THETN2.433e-4662.75Elongation factor Tu-A OS=Thermoanaerobacter tengc... [more]
EFTU1_CARHZ2.433e-4662.09Elongation factor Tu 1 OS=Carboxydothermus hydroge... [more]
EFTU2_THETN3.178e-4662.75Elongation factor Tu-B OS=Thermoanaerobacter tengc... [more]
EFTU_BACWK4.150e-4660.78Elongation factor Tu OS=Bacillus weihenstephanensi... [more]

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Properties
Property NameValue
Genbank description10d5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010d5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358200 ID=EG358200; Name=EG358200; organism=Citrus sinensis; type=EST; length=461bp
TGCCCTGGCCACGCCGATTATGTTAAGAATATGATTACTGGCGCTGCCCA
AATGGACGGTGCGATTTTGGTGGTGTCCGGTGCTGATGGGCCAATGCCAC
AAACTAAAGAACATATTTTGTTGGCTAAGCAAGTGGGTGTCCCTAACATG
GTTGTGTTTTTGAATAAACAGGACCAGGTTGATGATGAAGAGCTGTTGCA
ACTTGTGGAATTGGAGGTTCGTGAGTTACTTTCTTCTTATGAATTTCCTG
GTGATGATGTGCCTATTATTTCTGGTTCTGCGCTCTTAGCTTTAGAGGCT
TTGATGGCTAATCCTAGTATTAAGAGAGGAGAGAATCAATGGGTTGATAA
GATTTATGAGCTTATGGATTCTGTTGATAGTTACATTCCTATCCCACAAA
GACAAACTGATTTGCCCTTTTTGTTAGCTGTTGAAGATGTGTTTTCAATT
ACTGGTCGTGG
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