EY666209

Overview
NameEY666209
Unique NameEY666209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: CYSZ_CUCMA (Citrate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.100e-13
Identity = 51/196 (26.02%), Postives = 90/196 (45.92%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIXSV 746
            G +PS+ Q+      +   + VP  +   I A+P  AHPM    S + AL V         +G    K  +   +    +I + P +AA  Y R+     ++P   +L Y  NF +ML          +P++  ++ +   +H++HE    ++   HL +S + D + + + A+  L GPLHG AN+ VL  +  +
Sbjct:  150 GNLPSQSQLADWEFAISQHSAVPQGLVDIIQAMPHDAHPMGVLVSAMSALSVFHPDANPALRGQDLYKSKQVRDKQIARIIGKAPTIAAAAYLRLAGRPPVLP-SSNLSYSENFLYMLDSLGNRSYKPNPRLARVLDILFILHAEHEMNCSTSAARHLASSGV-DVFTALSGAVGALYGPLHGGANEAVLKMLSEI 343          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: CISY_ACIAN (Citrate synthase OS=Acinetobacter calcoaceticus subsp. anitratus GN=gltA PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.100e-13
Identity = 63/207 (30.43%), Postives = 94/207 (45.41%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIXSVVDECG--ENV 770
            G++P+ EQ      ++R    V D V +  +     AHPM      V AL          E   H+          ++ LIA++P +AA+ Y+       I P++D L+Y  NF HM+           +P +   M    T+H+DHE  N S  T  L  S  ++PY   +A ++ L GP HG AN+ VL     ++DE G  ENV
Sbjct:   95 GELPTAEQKVEFDAKVRAHTMVHDQVSRFFNGFRRDAHPMAIMVGVVGALSAFYHNNLDIEDINHREI-------TAIRLIAKIPTLAAWSYKYTVGQPFIYPRND-LNYAENFLHMMFATPADRDYKVNPVLARAMDRIFTLHADHEQ-NASTSTVRLAGSTGANPYACISAGISALWGPAHGGANEAVL----KMLDEIGSVENV 288          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: PRPC_SALTY (2-methylcitrate synthase OS=Salmonella typhimurium GN=prpC PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.040e-12
Identity = 48/182 (26.37%), Postives = 87/182 (47.80%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKML--ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 719
            GK+P++++++    +L+    +P  V   ++ALP  +HPM    +GV AL      +E +              + +  L+A +  +  Y Y   +   +I P+ D    GG+F H+L  + P     + M + + ++++HE  N S  T  ++A   SD Y +   A+  L GP HG AN+
Sbjct:   68 GKLPTRDELNAYKSKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTV--------SGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDVYSAIIGAIGALRGPKHGGANE 240          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: PRPC_ECOLI (2-methylcitrate synthase OS=Escherichia coli (strain K12) GN=prpC PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12
Identity = 48/182 (26.37%), Postives = 86/182 (47.25%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKML--ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 719
            GK+P+++++     +L+    +P  V   ++ALP  +HPM    +GV AL      +E +              + +  L+A +  +  Y Y   +   +I P+ D    GG+F H+L  + P     + M + + ++++HE  N S  T  ++A   SD Y +   A+  L GP HG AN+
Sbjct:   68 GKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTV--------SGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANE 240          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: CISY_HELPJ (Citrate synthase OS=Helicobacter pylori J99 GN=gltA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.027e-12
Identity = 65/210 (30.95%), Postives = 98/210 (46.67%), Query Frame = 3
Query:  177 TGKVPSKEQVDGLS--KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED-SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFD--------------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIXSVVD 752
            TG++P K Q + L    ELR R+ V + +     A P  AHPM + +SGV  L              H++ + E  Y+  +  ++A++P +AA  Y R      II  D +  Y  N   ML G+                P  +E     +T+H+DH G N S+ T   VAS    PY + +A ++ L G LHG AN++VLL +  + D
Sbjct:   91 TGELP-KNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYS--------THQNMHTEEDYQTMARRIVAKIPTLAAICY-RNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVGITPLEVEAFDKILTLHADH-GQNASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGD 289          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: CISY_DEIRA (Citrate synthase OS=Deinococcus radiodurans GN=gltA PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12
Identity = 54/195 (27.69%), Postives = 90/195 (46.15%), Query Frame = 3
Query:  183 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDP--KMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIXSVVDECG 761
            K+P+ E++     EL+    +PD +   I  +P   HPM    + V  L +     E       ++         S  +IA+   + A + +       + P+ D L + GNF +ML  ++P  +   L  + + +H+DH G N S  T    +S LSD Y    +A+  L GPLHG AN+ V+    +++DE G
Sbjct:   55 KLPTAEELAKFDAELKANRAIPDQLVGIIRDMPKGVHPMQALRTAVSYLGLLDPQAEDITPEARRAI--------STRMIAQFSTIIAAINRAQEGQDIVAPRAD-LTHAGNFLYMLTGNEPTPEQARLFDIALVLHADH-GMNASTFTAIATSSTLSDMYSCMVSAIGALKGPLHGGANEAVM----TMLDEIG 235          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: CISY_ACEAC (Citrate synthase OS=Acetobacter aceti GN=aarA PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12
Identity = 58/212 (27.36%), Postives = 94/212 (44.34%), Query Frame = 3
Query:  120 PAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED--SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVL 728
            P A+ D              G++P+K Q D  +  L +   + + +    +     AHPM      V AL   + + +A +  I       P   D  ++ LIA++P +AA+ Y+    +  I P++D L+Y  NF  M+          +P +   M   + +H+DHE  N S  T  L  S  ++P+   AA +  L GP HG AN+ VL
Sbjct:   80 PIAQLDENASYEEVIYLLLNGELPNKVQYDTFTNTLTNHTLLHEQIRNFFNGFRRDAHPMAILCGTVGALS--AFYPDANDIAI-------PANRDLAAMRLIAKIPTIAAWAYKYTQGEAFIYPRND-LNYAENFLSMMFARMSEPYKVNPVLARAMNRILILHADHEQ-NASTSTVRLAGSTGANPFACIAAGIAALWGPAHGGANEAVL 280          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: CISY_PYRFU (Citrate synthase OS=Pyrococcus furiosus GN=gltA PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.808e-12
Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFDDPKMLE-LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVL 728
            GK+PS  +++   KEL     +P  V + ++ALP   HPM    + +  L       ++ +  +      E  Y   +++ A++P + A  Y RI    + +P  + L +  NF +ML G + PK  E  M + + ++++HE  N S      V S LSD Y +  A +  L GP+HG A +E +
Sbjct:   57 GKLPSLSELENFKKELAKSRGLPKEVIEIMEALPKNTHPMGALRTIISYL---GNIDDSGDIPVTP----EEVYRIGISVTAKIPTIVANWY-RIKNGLEYVPPKEKLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHE-INASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAI 232          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: CISY_HELPY (Citrate synthase OS=Helicobacter pylori GN=gltA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11
Identity = 64/210 (30.48%), Postives = 97/210 (46.19%), Query Frame = 3
Query:  177 TGKVPSKEQVDGLS--KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED-SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFD--------------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIXSVVD 752
            TG++P K Q + L    ELR R+ V + +     A P  AHPM + +SGV  L              H++ + E  Y+  +  ++A++P +AA  Y R      II  D +  Y  N   ML G+                P  +E     +T+H+DH   N S+ T   VAS    PY + +A ++ L G LHG AN++VLL +  + D
Sbjct:   91 TGELP-KNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYS--------THQNMHTEEDYQTMARRIVAKIPTLAAICY-RNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVEITPLEVEAFDKILTLHADHSQ-NASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGD 289          
BLAST of EY666209 vs. ExPASy Swiss-Prot
Match: CISY3_BACSU (2-methylcitrate synthase OS=Bacillus subtilis GN=mmgD PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 50/185 (27.03%), Postives = 91/185 (49.19%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKMLE--LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVL 728
            G++P + +++ L +++   +++P    + ++ LP   HPM    +G+ AL         Y++ I   +      E +  L+ ++P + A  Y+ I K   I+P   +L Y  NF +M+    P  LE  +    + ++S+HE  N S     ++AS  SD Y +   A+  L G LHG AN+ V+
Sbjct:   57 GRLPEESEMETLERKINSASSLPADHLRLLELLPEDTHPMDGLRTGLSALA-------GYDRQID-DRSPSANKERAYQLLGKMPALTAASYRIINKKEPILPLQ-TLSYSANFLYMMTGKLPSSLEEQIFDRSLVLYSEHEMPN-STFAARVIASTHSDLYGALTGAVASLKGNLHGGANEAVM 231          
The following BLAST results are available for this feature:
BLAST of EY666209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CYSZ_CUCMA6.100e-1326.02Citrate synthase, glyoxysomal OS=Cucurbita maxima ... [more]
CISY_ACIAN6.100e-1330.43Citrate synthase OS=Acinetobacter calcoaceticus su... [more]
PRPC_SALTY1.040e-1226.372-methylcitrate synthase OS=Salmonella typhimurium... [more]
PRPC_ECOLI2.318e-1226.372-methylcitrate synthase OS=Escherichia coli (stra... [more]
CISY_HELPJ3.027e-1230.95Citrate synthase OS=Helicobacter pylori J99 GN=glt... [more]
CISY_DEIRA5.164e-1227.69Citrate synthase OS=Deinococcus radiodurans GN=glt... [more]
CISY_ACEAC5.164e-1227.36Citrate synthase OS=Acetobacter aceti GN=aarA PE=1... [more]
CISY_PYRFU8.808e-1228.65Citrate synthase OS=Pyrococcus furiosus GN=gltA PE... [more]
CISY_HELPY1.502e-1130.48Citrate synthase OS=Helicobacter pylori GN=gltA PE... [more]
CISY3_BACSU2.563e-1127.032-methylcitrate synthase OS=Bacillus subtilis GN=m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-015-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666209 ID=EY666209; Name=EY666209; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGGCGGGATGAGAGGAATGACTGGCTTACTTTGGGAAACC
TCATTACTTGACCCTGATGAGGGAATTCGCTTTCGGGGTCTGTCTATTCC
TGAGTGCCAGAAGTTGTTACCTGCCGCTAAGCCAGATGGAGAACCTTTGC
CTGAGGGTCTTCTTTGGCTTCTTTTAACTGGAAAGGTACCGAGCAAAGAG
CAGGTCGATGGCTTGTCCAAGGAATTGAGAGATCGTGCCACTGTCCCAGA
TTATGTGTACAAGGCCATTGATGCTCTACCTGTAACGGCACATCCGATGA
CTCAGTTTGCTAGTGGGGTCATGGCTCTGCAGGTGCAAAGTGAATTTCAG
GAGGCTTATGAGAAGGGAATTCATAAATCAAAGTACTGGGAACCAACATA
TGAGGATTCTCTTAATTTGATTGCTCGTGTGCCGGTAGTAGCTGCGTACG
TTTATCAAAGGATATACAAGGATGGAAAGATTATTCCCAAGGATGACTCA
CTGGATTATGGTGGGAACTTCTCGCACATGTTGGGATTCGATGATCCTAA
GATGCTAGAGCTTATGAGGCTTTATGTTACCATTCACAGTGACCACGAAG
GTGGAAATGTCAGTGCTCACACCGGCCATCTAGTTGCAAGTGCACTTTCA
GATCCTTATCTTTCTTTTGCTGCCGCATTAAATGGTTTAGCTGGACCACT
CCATGGTTTGGCTAATCAAGAAGTTTTGCTTTGGATCNAATCTGTGGTGG
ATGAGTGTGGGGAGAACGTAACCACGCACCAATTGAAAGATATGTCTGGG
AAAACTTGAAAATGGGCAGGTTGCCCCTGGATTTGGCCAGGTGGTTTTGC
GAAACTGATCGCCAATCACTTCGCAAAGGAGTTGCCTGAACCATTTGCT
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