CN182848

Overview
NameCN182848
Unique NameCN182848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13
Identity = 60/198 (30.30%), Postives = 97/198 (48.99%), Query Frame = -2
Query:   99 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA-SEEAGFITAHNLVIDGG 689
            DV+KE DVE+ ++ A+   G +D++ NNA           +       ++ +NL G+    + A K M++ +RKG II  +S   ++G +    Y+ +K  +IG +++ A E     I VN + P  + S+M        LG+ DM+ + +       G++  GR    EDVA    FLA S  A +IT     IDGG
Sbjct:  135 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIR-MKKSQWDEVIDLNLTGVFLCTQAATKIMMK-KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-----LGE-DMEKKIL-------GTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 317          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: FABG_AGGAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aggregatibacter actinomycetemcomitans GN=fabG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 48/157 (30.57%), Postives = 79/157 (50.32%), Query Frame = -2
Query:   99 LNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 569
            L  ED   +L  NL+G  + +      MI  ++ G I+C +S + ++G      YS SK  IIG A++ A EL K  I VNC++P  + +++L           ++  +E+ KM+        GR    E+VA A  FL  E+A ++T   + ++GG
Sbjct:   99 LTDEDWDRVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGIIGAAKALAVELAKRKITVNCVAPGLIDTDIL---------DENVPIDEILKMIP------AGRMGDPEEVAHAVNFLMGEKAAYVTRQVIAVNGG 240          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 60/198 (30.30%), Postives = 97/198 (48.99%), Query Frame = -2
Query:   99 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA-SEEAGFITAHNLVIDGG 689
            DV+KE DV++ ++ AV   G +D++ NNA           +       ++ +NL G+    + A K M++ +RKG II  +S   ++G +    Y+ +K  +IG +++ A E     I VN + P  + S+M        LG+ DM+ + +       G++  GR    EDVA    FLA S  A +IT     IDGG
Sbjct:   72 DVSKEADVDAMMKTAVDKWGTIDVVVNNAGDTLLIR----MKKSQWDEVMDLNLTGVFLCSQAATKIMMK-KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-----LGE-DMEKKIL-------GTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGG 251          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: DHBA_BACSU (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Bacillus subtilis GN=dhbA PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 59/185 (31.89%), Postives = 93/185 (50.27%), Query Frame = -2
Query:   87 GQLDIMFNNAXXXXXXXXXXSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDS---GSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTG 632
            G +DI+ N A           L+ E+ +   SVN  G+ +  +  +K M++ +R GSI+   S+AA +   +  AY+ SK A +   +    EL ++ IR N +SP    ++M  + +    G      E+V K   ++   G  L+ + A   D+A A LFL S +AG IT HNL +DGG T G
Sbjct:   84 GPIDILVNVAGVLRPGLIHS-LSDEEWEATFSVNSTGVFNASRSVSKYMMD-RRSGSIVTVGSNAAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSPGSTETDMQWSLWADENGA-----EQVIKGSLETFKTGIPLK-KLAKPSDIADAVLFLVSGQAGHITMHNLCVDGGATLG 260          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: BDH2_BOVIN (3-hydroxybutyrate dehydrogenase type 2 OS=Bos taurus GN=BDH2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 65/206 (31.55%), Postives = 105/206 (50.97%), Query Frame = -2
Query:   93 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXSLNMEDVKFLLSVNLNGILHGIKHAAKAMIE---GQRKGSIICTSSSAAIMGGLASHA-YSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLR---GRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 689
            DVTK++ ++           +LD++FN A           L+ E+  +  S+NLN  +  +    KA +     Q+ G+II  SS A+ + G+ +   YS +K A+IGL +S A +  + GIR NC+ P  V +  L         +A   PEE       S  L R   GR A+ E+VA   ++LAS+E+ +IT + ++IDGG++
Sbjct:   58 DVTKKKQIDQFANDIE----RLDVLFNVAGFVHHGTI---LDCEETDWDFSMNLN--VRSMYLMIKAFLPKMMAQKSGNIINMSSVASSIKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERI-----QARPNPEEAL-----SDFLKRQKTGRFATAEEVALLCVYLASDESAYITGNPVIIDGGWS 244          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 60/198 (30.30%), Postives = 95/198 (47.98%), Query Frame = -2
Query:   96 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGY 689
            D+T  + V +AV       G+LD+M NNA           ++ E+ K ++ +N+ G+ +G   A + M +  +KG II T+S   I G L+   Y  SK ++IGL      E+ +  IRV  ++P  V ++M            +  P E+  M     +L   R    E++A   LFLAS+ A  ITA  + +DG Y
Sbjct:   65 DLTSRDAVMAAVGQVAQKYGRLDVMINNAGITSNNVFSR-VSEEEFKHIMDINVTGVFNGAWCAYQCMKDA-KKGVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDM-----------TNGNPPEI--MEGYLKALPMKRMLEPEEIANVYLFLASDLASGITATTVSVDGAY 247          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: VIBA_VIBCH (Vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Vibrio cholerae GN=vibA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.097e-13
Identity = 50/157 (31.85%), Postives = 82/157 (52.23%), Query Frame = -2
Query:   93 MEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYT 563
            ME V  + +VN  G+L  ++  A +M + +++GS++   S+AA    ++  AY  SK A+  L +    EL  +GIR N +SP    + M    + +  G+A +   +  +       +   + A   D+AQA LFL S+ AG IT H+L +DGG T
Sbjct:  107 MEQVSSIFTVNAFGVLACMQGVASSM-KARQQGSMVIIGSNAANTPRMSIGAYGASKAALHMLVKCIGMELAPYGIRCNLVSPGSTRTAMQQQLWTEQYGEAQVIAGDAAQF---RLGIPLNKIAEPADIAQAVLFLLSDNAGHITLHDLRVDGGAT 259          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.097e-13
Identity = 60/198 (30.30%), Postives = 97/198 (48.99%), Query Frame = -2
Query:   99 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLA-SEEAGFITAHNLVIDGG 689
            DV+KE DV++ ++ AV   G +D++ NNA           +       ++ +NL G+    + A K M++ +RKG II  +S   ++G +    Y+ +K  +IG +++ A E     I VN + P  + S+M        LG+ DM+ + +       G++  GR    EDVA    FLA S  A +IT     IDGG
Sbjct:  143 DVSKEADVDAMMKTAVDAWGTIDVVVNNAGITRDTLLIR-MKKSQWDEVIDLNLTGVFLCTQAATKIMMK-KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-----LGE-DMEKKIL-------GTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 325          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 58/197 (29.44%), Postives = 97/197 (49.24%), Query Frame = -2
Query:   99 DVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 689
            DV+K + V + V+  ++    +D++ NNA           ++ E+   +++ NL  I +      + MI+  R G+II  SS   + G      Y+ +K  IIG +++ + E+G   IRVNCI+P  + ++M  +         D    E  K V        GR    E++A+AALFLAS+ + +IT   L +DGG
Sbjct:   65 DVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMR-MSEEEWSSVINTNLGSIYNVCSAVIRPMIKA-RSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKSLN-------DNLKNEWLKGVP------LGRVGMPEEIAKAALFLASDGSSYITGQVLSVDGG 246          
BLAST of CN182848 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 59/198 (29.80%), Postives = 88/198 (44.44%), Query Frame = -2
Query:   99 CDVTKEEDVESAVRLAVSWKGQLDIMFNNAXXXXXXXXXXSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGG 692
            C V K ED E  V  AV   G +DI+ +NA           +  E     L +N+       K     M E +  GS++  SS AA         Y++SK A++GL ++ A EL    IRVNC++P      ++  ++ + L     K E + + +R        R    ED A    FL SE+A +IT   +V+ GG
Sbjct:   70 CHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEM-EKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAP-----GLIKTSFSRMLWMDKEKEESMKETLRIR------RLGEPEDCAGIVSFLCSEDASYITGETVVVGGG 255          
The following BLAST results are available for this feature:
BLAST of CN182848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
FABG1_BRANA1.230e-1330.303-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
FABG_AGGAC1.606e-1330.573-oxoacyl-[acyl-carrier-protein] reductase OS=Aggr... [more]
FABG4_BRANA1.606e-1330.303-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
DHBA_BACSU1.606e-1331.892,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]
BDH2_BOVIN1.606e-1331.553-hydroxybutyrate dehydrogenase type 2 OS=Bos taur... [more]
BAIA2_EUBSP1.606e-1330.30Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (st... [more]
VIBA_VIBCH2.097e-1331.85Vibriobactin-specific 2,3-dihydro-2,3-dihydroxyben... [more]
FABG2_BRANA2.097e-1330.303-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG_CHLTR2.739e-1329.443-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
DHRS4_PONAB2.739e-1329.80Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0003B20_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0003B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182848 ID=CN182848; Name=CN182848; organism=Citrus sinensis; type=EST; length=762bp
CTTGCTGGTAATAGAAAATCATATGCTCTCATTTTTTATGTTCCCATACT
CAAGAACTATTGGTAGATAAAACTCATGCTACTGGTACCTGTAGTATAAC
CTCCATCAATAACAAGATTGTGTGCTGTTATAAATCCAGCTTCTTCACTT
GCTAGAAACAGCGCAGCTTGTGCCACATCTTCTATGCTTGCACTCCTCCC
ACGCAGCAAACTTCCACTGTCTCGCACCATCTTGCACACTTCTTCAGGTT
TCATATCAGCTTTCCCCAGGTACTTTCTGTAGGCATTCACAAGCATCTCT
GAAGGAACTCCATGAGGCGAGATGCAGTTCACTCGAATTCCATGCTTGCC
CAGCTCGCAGGCTGTGCTTCTTGCCAAGCCAATGATTGCCTCTTTTGACA
ACGAATAGGCATGGGATGCAAGGCCACCCATGATGGCTGCAGAGCTAGAA
GTGCAGATAATACTGCCTTTTCTCTGGCCTTCGATCATGGCCTTCGCCGC
ATGCTTGATTCCATGTAATATGCCATTCAGATTAACTGAGAGAAGAAACT
TCACATCTTCCATGTTAAGGCTTGTGATGCTGCCTCCAGAGCCAGAAATT
CCAGCATTGTTGAACATTATGTCTAACTGGCCTTTCCAGGAAACTGCAAG
CCGGACAGCTGATTCAACATCTTCTTCCTTTGTCACGTCGCAATGTATGT
ACCCGGCCGCCTATTGTGCTGGCTAGAGCAGCGCCGAGTTCATCAAGAAT
GTCTGCTATGAC
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