EY666171

Overview
NameEY666171
Unique NameEY666171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA1_PHAVU (Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.943e-91
Identity = 153/193 (79.27%), Postives = 173/193 (89.64%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 619
            DK+FGRDI DAHYKAC+YAGINISG NGEVMPGQWE+QVGP+VGI AGD +W +RY+LERITE AGVVLS DPKPI+GDWNGAG HTNYSTK+MR +GGYE IK +I  L  RHKEHI+AYGEGNERRLTG+HETA I++F WGVANRG SIRVGR+TEK GKGY EDRRPASNMDPYVVTS++A+TTILW+P
Sbjct:  164 DKAFGRDIVDAHYKACVYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEVAGVVLSFDPKPIKGDWNGAGAHTNYSTKTMRNDGGYEEIKSAIQKLGKRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIADTTILWKP 356          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA2_SOYBN (Glutamine synthetase cytosolic isozyme 2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 3.844e-91
Identity = 152/193 (78.76%), Postives = 173/193 (89.64%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 619
            +K+FGRDI D+HYKAC+YAGINISG NGEVMPGQWE+QVGPS+GI A D +W +RY+LERITE AGVVLS DPKPI+GDWNGAG HTNYSTKSMR +GGYE IKK+I  L  RHKEHI+AYGEGNERRLTG+HETA +++F WGVANRG SIRVGR+TEK GKGY EDRRPASNMDPYVVTS++AETTILW+P
Sbjct:  164 NKAFGRDIVDSHYKACIYAGINISGINGEVMPGQWEFQVGPSIGISAADELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGYEVIKKAIAKLEKRHKEHIAAYGEGNERRLTGRHETADMNTFVWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLN13_ORYSJ (Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 5.020e-91
Identity = 149/194 (76.80%), Postives = 173/194 (89.18%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 622
            DKS+GRDI DAHYKACL+AGINISG N EVMPGQWE+Q+GP VG+ AGDH+W +RY+LERITE AGVV+S DPKPI GDWNGAG HTNYSTKSMR  GGYE IKK+I  L +RH+EHI+AYG+GNERRLTG+HETA I++F WGVANRG S+RVGR+TEK GKGY EDRRPASNMDPY+VT+++AETTILWEP+
Sbjct:  166 DKSYGRDIVDAHYKACLFAGINISGINAEVMPGQWEFQIGPVVGVSAGDHVWVARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRSNGGYEVIKKAIKKLGMRHREHIAAYGDGNERRLTGRHETADINNFVWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMDPYLVTAMIAETTILWEPS 359          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA3_MAIZE (Glutamine synthetase root isozyme 3 OS=Zea mays GN=GLN4 PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.118e-90
Identity = 151/193 (78.24%), Postives = 174/193 (90.16%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 619
            +KSFGRDI DAHYKACLYAGINISG NGEVMPGQWE+QVGPSVGI +GD +W +RY+LERITE AGVV++ DPKPI GDWNGAG HTNYST+SMR+EGGYE IK +I  L LRH+EHI+AYGEGN+ RLTG+HETA I++FSWGVANRG S+RVGRETE+ GKGY EDRRPASNMDPYVVTS++AETTI+W+P
Sbjct:  164 EKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHREHIAAYGEGNDGRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETTIIWKP 356          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA1_PEA (Glutamine synthetase nodule isozyme OS=Pisum sativum GN=GS1 PE=2 SV=2)

HSP 1 Score: 333.183 bits (853), Expect = 1.118e-90
Identity = 155/193 (80.31%), Postives = 174/193 (90.16%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 619
            DK+FGRD+ +AHYKACL+AGINISG NGEVMPGQWE+QVGPSVGI AGD IW +RY+LERITE AGVVL+ DPKPI+GDWNGAG HTNYSTKSMRE+GGYE IKK+I  L  R  EHISAYGEGNERRLTGKHETA I++FSWGVANRG S+RVGR+TEK+GKGY EDRRPASNMDPYVVTS++AETTIL +P
Sbjct:  163 DKAFGRDVVEAHYKACLFAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEVAGVVLTFDPKPIKGDWNGAGAHTNYSTKSMREDGGYEIIKKAIEKLGKRLPEHISAYGEGNERRLTGKHETADINTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILLKP 355          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.250e-90
Identity = 153/190 (80.53%), Postives = 171/190 (90.00%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 610
            DK+FGRDI DAHYKACLYAGINISG NGEVMPGQWE+QVGP+VGI AGD +W +RY+LERITE AGVV+SLDPKPI GDWNGAG HTNYSTKSMR EGG+E IKK+I  L  +H +HI+AYGEGNERRLTGKHETASI  FSWGVANRG S+RVGR+TEK+GKGY EDRRPASNM+PYVVTS++AETTIL
Sbjct:  163 DKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFEIIKKAIAKLETKHAQHIAAYGEGNERRLTGKHETASIHKFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMEPYVVTSMIAETTIL 352          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA_LUPLU (Glutamine synthetase nodule isozyme OS=Lupinus luteus PE=3 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.699e-89
Identity = 152/190 (80.00%), Postives = 169/190 (88.95%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 610
            +K+FGRDI D+HYKACLYAGINISG N EVMPGQWE+QVGPSVGI AGD +W +RY+LERITE AGVVLSLDPKPI GDWNGAG HTNYSTKSMR +GGYE IKK+I  L  RH EHI+AYGEGNERRLTG+HETA I +F WGVANRG SIRVGR+TEK+GKGY EDRRPASNMDPYVVTS++AETT+L
Sbjct:  164 EKAFGRDIVDSHYKACLYAGINISGINAEVMPGQWEFQVGPSVGISAGDELWVARYILERITEIAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMRNDGGYEVIKKAIEKLGKRHNEHIAAYGEGNERRLTGRHETADISTFFWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLL 353          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA4_MAIZE (Glutamine synthetase root isozyme 4 OS=Zea mays GN=GLN5 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.699e-89
Identity = 151/193 (78.24%), Postives = 173/193 (89.64%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 619
            +KSFGRDI DAHYKACLYAGINISG NGEVMPGQWE+QVGPSVGI +GD +W +RY+LERITE AGVV++ DPKPI GDWNGAG HTNYST+SMR+EGGYE IK +I  L LRHKEHI+AYGEGNERRLTG+HETA I++FSWGVANRG S+ VG +TE+ GKGY EDRRPASNMDPYVVTS++AETTI+W+P
Sbjct:  164 EKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASVAVG-QTEQNGKGYFEDRRPASNMDPYVVTSMIAETTIVWKP 355          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA_NICPL (Glutamine synthetase OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.785e-88
Identity = 149/190 (78.42%), Postives = 169/190 (88.95%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 610
            DK+FGRDI D+HYKA LYAGINISG NGEVMPGQWE+QVGPSVGI AGD +W +RY+LERI E AGVV+S DPKPI GDWNGAG HTNYSTKSMRE+GGYE I K+I  L L+HKEHI+AYGEGNERRLTGKHETA+I +F WGVANRG S+RVGR+TEK GKGY EDRRPASNMDPYVVT+++A+TTI+
Sbjct:  164 DKAFGRDIVDSHYKAYLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWVARYILERIAEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMREDGGYEVILKAIEKLGLKHKEHIAAYGEGNERRLTGKHETANISTFKWGVANRGASVRVGRDTEKAGKGYFEDRRPASNMDPYVVTAMIADTTII 353          
BLAST of EY666171 vs. ExPASy Swiss-Prot
Match: GLNA3_HORVU (Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.785e-88
Identity = 145/193 (75.13%), Postives = 171/193 (88.60%), Query Frame = 2
Query:   41 DKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREEGGYETIKKSILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 619
            DKSFGRDI D+HYKACL+ G+NISG NGEVMPGQWE+QVGP+VGI AGD +W +RY+LERITE AGVV++ DPKPI GDWNGAG HTNYST+SMR +GG++ I  ++  L L+HKEHI+AYGEGNERRLTGKHETA I++ SWGVANRG S+RVGRETE+ GKGY EDRRPASNMDPYVVTS++A+TTILW+P
Sbjct:  164 DKSFGRDIVDSHYKACLFGGVNISGINGEVMPGQWEFQVGPTVGISAGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRNDGGFKVIVDAVEKLKLKHKEHIAAYGEGNERRLTGKHETADINTSSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAQTTILWKP 356          
The following BLAST results are available for this feature:
BLAST of EY666171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA1_PHAVU2.943e-9179.27Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE... [more]
GLNA2_SOYBN3.844e-9178.76Glutamine synthetase cytosolic isozyme 2 OS=Glycin... [more]
GLN13_ORYSJ5.020e-9176.80Glutamine synthetase cytosolic isozyme 1-3 OS=Oryz... [more]
GLNA3_MAIZE1.118e-9078.24Glutamine synthetase root isozyme 3 OS=Zea mays GN... [more]
GLNA1_PEA1.118e-9080.31Glutamine synthetase nodule isozyme OS=Pisum sativ... [more]
GLNA1_DAUCA4.250e-9080.53Glutamine synthetase cytosolic isozyme OS=Daucus c... [more]
GLNA_LUPLU4.699e-8980.00Glutamine synthetase nodule isozyme OS=Lupinus lut... [more]
GLNA4_MAIZE4.699e-8978.24Glutamine synthetase root isozyme 4 OS=Zea mays GN... [more]
GLNA_NICPL6.785e-8878.42Glutamine synthetase OS=Nicotiana plumbaginifolia ... [more]
GLNA3_HORVU6.785e-8875.13Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-014-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666171 ID=EY666171; Name=EY666171; organism=Citrus sinensis; type=EST; length=840bp
GGCAGTACGGTCCCGGAATTCCGGGTCGACCCCGCGTCCGGATAAGTCGT
TTGGCCGTGACATTGCAGATGCTCATTACAAGGCTTGCTTGTATGCTGGC
ATTAACATTAGTGGCACCAACGGGGAGGTTATGCCTGGCCAGTGGGAATA
TCAAGTTGGTCCCAGTGTAGGCATTGATGCTGGAGATCATATATGGTGTT
CGAGATACCTTCTTGAGAGAATCACTGAACAAGCTGGTGTTGTTCTCTCA
CTTGATCCAAAACCAATTGAGGGAGACTGGAATGGTGCTGGATGCCACAC
CAATTACAGTACAAAGAGTATGAGAGAGGAAGGAGGCTATGAAACTATTA
AGAAGTCAATCTTGAATCTGTCCCTTCGCCATAAAGAACACATCAGTGCT
TATGGTGAAGGAAATGAGAGAAGGCTAACAGGAAAGCATGAAACAGCTAG
CATTGACTCATTTTCTTGGGGTGTGGCAAATCGTGGTTGCTCAATCCGTG
TGGGACGTGAAACTGAGAAGCAAGGCAAAGGTTACTTGGAAGATAGGCGT
CCAGCTTCAAACATGGACCCTTATGTAGTGACCTCGTTACTGGCTGAAAC
TACAATATTGTGGGAACCCACACTTGAGGCTGAAGCGCTAGCTGCTCAAA
ATTGGCATTGAAATGTCTGAAGTTGATTATAAACACCTGAAGAACTTGCA
AACCATTCTCCTTGGATTTAATTGCCCCGGGTTTGGGGGAATACTTTTCC
CTTTTCTTTTTAGCTTTAAGGGGAAAAACTTGTTAGATAAAAGGCCCCCA
CCTATAAGGTCCATCGCCCAGTTAACCTGAACCCAAAAAT
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