EY666168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666168 vs. ExPASy Swiss-Prot
Match: UBX2B_CHICK (UBX domain-containing protein 2B OS=Gallus gallus GN=UBXN2B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 58/221 (26.24%), Postives = 98/221 (44.34%), Query Frame = 2 Query: 62 AVRDKKPAKPSSSRAGGIRTLSDLNRRSGPXXXXXXXAPQEYYTG-GEKSGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLXXXXXXXX----FTGTARLLSGETVPSAPQ---QPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPAN 697 ++R KP S + G++ S + R Q +Y+G E G+ + S V +F +AKE GAV PL+ F+G L + + + + + + W NGF+++DG LR DP NA FLES+K+ E P +L+ V++++ ++ + +P F G G+ LGS + P + STP++ Sbjct: 56 SLRSDKPTTTKMSNSKGLKIDSFRSLRKPERSMSDDKENQRFYSGDSEYRGLQIWGASNNPSKIVAELFKEAKEHGAV--PLDEASRTSGDFSKAKSFSGGGYRLGDSSQKHSEYIYGENQDVQILLKLWRNGFSLDDGELRSYSDPINAQFLESVKRGEIPVDLQRLVHGGQVNLDMEDHQEQEYVKPRLRFKAFSGEGQKLGSLT-----PEIVSTPSS 269
BLAST of EY666168 vs. ExPASy Swiss-Prot
Match: NSF1C_CHICK (NSFL1 cofactor p47 OS=Gallus gallus GN=NSFL1C PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 55/178 (30.90%), Postives = 84/178 (47.19%), Query Frame = 2 Query: 179 QEYYTGG-EKSGM-LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLXXXXXXXXFTGTARLLSGETVPSAPQQPEPIV-----HNIV--------FWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSS 655 Q +Y GG E+SG +V P K PN+ V+ +F AKE GAV + + F G G + + P++ V HN V W GF+++ G LR DP NA FL+ I++ E P EL + V++++ RD + +P+ F G G+ LGS++ Sbjct: 91 QRFYAGGSERSGQQIVGPPRKKSPNELVEDLFKGAKEHGAVAVDRTAKSSGESSKPKPFAG-----GGYRLGATPEEESAYVAGERRHNSVQDVHVVLKLWKTGFSLDSGELRSYQDPSNAQFLDDIRRGEVPAELRRLARGGQVNLDMEDHRDEEYVKPKSVFKAFTGEGQKLGSTA 263 The following BLAST results are available for this feature:
BLAST of EY666168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666168 ID=EY666168; Name=EY666168; organism=Citrus sinensis; type=EST; length=868bpback to top |