CN189219

Overview
NameCN189219
Unique NameCN189219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.065e-33
Identity = 79/219 (36.07%), Postives = 121/219 (55.25%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKL---ISSKSSSDVTP------------FTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608
            L  + GESE  VR +F +AR  +PC+LFFDE+D++ T+RG    + G   +R+LNQLL E+DG + +K VF+IGATNRPD++D A+LRPGR  +L+Y+PLP  D R  I +A  RK P+   VD+  +A  K+ +  SG                  +   I ++      P              I+  HFE+++     SVS+  I++Y+  ++T +
Sbjct:  551 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALA--KYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQ 767

HSP 2 Score: 85.8853 bits (211), Expect = 2.647e-16
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386
            ++K  GESE  +R  F  A   +P I+F DE+D++  KR K  G V  R+++QLL  +DG   R  V V+GATNRP+ +D A+ R GRF + + + +P    R  +L    +   + + VDL  I++
Sbjct:  278 MSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISK 404
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX6_YEAST (Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae GN=PEX6 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.309e-33
Identity = 84/229 (36.68%), Postives = 127/229 (55.46%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDG-ADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSV----------------DLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSK------SSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA 614
            LN Y+GESE  VR +F +AR   PC++FFDE+D++  KRG +G  G V++R+++QLL ELDG +    GVFVIGATNRPD++D A+LRPGRF KLLY+ +P  D + L ILEAL RK  +D+ V                D + +        +S                  + IS++      ++ + T   +K+  F +A  +++PSVS  ++  Y+ +   F+ A
Sbjct:  802 LNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMSRIARMVEKKVSQHNELTGENISTRRWFDKIATKEDTKVVVKMEDFLKAQEQLTPSVSRAELNHYEAVRANFEGA 1030
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: RIX7_YEAST (Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae GN=RIX7 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.183e-32
Identity = 80/218 (36.70%), Postives = 115/218 (52.75%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARK--KPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDV------------------TPFTIKLTHFEQALSKISPSVSELQIQRYKTLSE 599
            LNKYVGESE ++R +F+RAR   PC++FFDE+DAL  +R         R++N LL ELDG + R+G+FVIGATNRPD++D A+LRPGR  K L++ LP  +E+  I++ L +    P+   VD   I +++ C N SG                 K   S+    V                      + ++ F  AL KI PSVS+    +Y  L++
Sbjct:  604 LNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKDRLKYDRLNK 821

HSP 2 Score: 87.4261 bits (215), Expect = 9.098e-17
Identity = 52/129 (40.31%), Postives = 77/129 (59.69%), Query Frame = 3 
Query:   21 GESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVE---RLLNQLLIELDGADKR----KGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386
            GESE  +R LF  AR+ +PC++FFDE+DA+T KR  +GG   E   R++ QLL  +D         K V +IGATNRPD +D A+ R GRF + + + +P    R  IL+ ++    ID ++D   +A+
Sbjct:  281 GESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR--DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAK 407
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.494e-32
Identity = 80/218 (36.70%), Postives = 116/218 (53.21%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKL---ISSKSSSDVTPFT-----------IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608
            L  + GESE  VR +F +AR  +PC+LFFDE+D++   RG    +GG   +R++NQ+L E+DG   +K VF+IGATNRPD++D A+LRPGR  +L+Y+PLP    R  IL+A  RK PI   VDL  +A  K     SG                  +   I  +      P             I+  HFE+A+     SVS+  I++Y+  ++T +
Sbjct:  548 LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLA--KMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 763

HSP 2 Score: 87.8113 bits (216), Expect = 6.966e-17
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++K  GESE  +R  F  A   +P I+F DE+DA+  KR K  G V  R+++QLL  +DG  +R  V V+ ATNRP+ +D A+ R GRF + + + +P    R  IL+   +   + D VDL  +A
Sbjct:  275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 5.870e-32
Identity = 80/219 (36.53%), Postives = 116/219 (52.97%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLIS---------------SKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608
            L  + GESE  VR +F +AR  +PC+LFFDE+D++   RG    +GG   +R++NQ+L E+DG   +K VF+IGATNRPD++D A+LRPGR  +L+Y+PLP    R  IL+A  RK P+   VDL  +A  K     SG                  + S                    D  P  I+  HFE+A+     SVS+  I++Y+  ++T +
Sbjct:  548 LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA--KMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 763

HSP 2 Score: 87.8113 bits (216), Expect = 6.966e-17
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++K  GESE  +R  F  A   +P I+F DE+DA+  KR K  G V  R+++QLL  +DG  +R  V V+ ATNRP+ +D A+ R GRF + + + +P    R  IL+   +   + D VDL  +A
Sbjct:  275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5)

HSP 1 Score: 137.887 bits (346), Expect = 5.870e-32
Identity = 80/219 (36.53%), Postives = 116/219 (52.97%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLIS---------------SKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608
            L  + GESE  VR +F +AR  +PC+LFFDE+D++   RG    +GG   +R++NQ+L E+DG   +K VF+IGATNRPD++D A+LRPGR  +L+Y+PLP    R  IL+A  RK P+   VDL  +A  K     SG                  + S                    D  P  I+  HFE+A+     SVS+  I++Y+  ++T +
Sbjct:  548 LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA--KMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 763

HSP 2 Score: 87.8113 bits (216), Expect = 6.966e-17
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++K  GESE  +R  F  A   +P I+F DE+DA+  KR K  G V  R+++QLL  +DG  +R  V V+ ATNRP+ +D A+ R GRF + + + +P    R  IL+   +   + D VDL  +A
Sbjct:  275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4)

HSP 1 Score: 137.887 bits (346), Expect = 5.870e-32
Identity = 80/219 (36.53%), Postives = 116/219 (52.97%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLIS---------------SKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608
            L  + GESE  VR +F +AR  +PC+LFFDE+D++   RG    +GG   +R++NQ+L E+DG   +K VF+IGATNRPD++D A+LRPGR  +L+Y+PLP    R  IL+A  RK P+   VDL  +A  K     SG                  + S                    D  P  I+  HFE+A+     SVS+  I++Y+  ++T +
Sbjct:  548 LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA--KMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 763

HSP 2 Score: 87.8113 bits (216), Expect = 6.966e-17
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++K  GESE  +R  F  A   +P I+F DE+DA+  KR K  G V  R+++QLL  +DG  +R  V V+ ATNRP+ +D A+ R GRF + + + +P    R  IL+   +   + D VDL  +A
Sbjct:  275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4)

HSP 1 Score: 137.887 bits (346), Expect = 5.870e-32
Identity = 80/219 (36.53%), Postives = 116/219 (52.97%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLIS---------------SKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608
            L  + GESE  VR +F +AR  +PC+LFFDE+D++   RG    +GG   +R++NQ+L E+DG   +K VF+IGATNRPD++D A+LRPGR  +L+Y+PLP    R  IL+A  RK P+   VDL  +A  K     SG                  + S                    D  P  I+  HFE+A+     SVS+  I++Y+  ++T +
Sbjct:  548 LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA--KMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 763

HSP 2 Score: 87.8113 bits (216), Expect = 6.966e-17
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++K  GESE  +R  F  A   +P I+F DE+DA+  KR K  G V  R+++QLL  +DG  +R  V V+ ATNRP+ +D A+ R GRF + + + +P    R  IL+   +   + D VDL  +A
Sbjct:  275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.870e-32
Identity = 80/219 (36.53%), Postives = 116/219 (52.97%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLIS---------------SKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608
            L  + GESE  VR +F +AR  +PC+LFFDE+D++   RG    +GG   +R++NQ+L E+DG   +K VF+IGATNRPD++D A+LRPGR  +L+Y+PLP    R  IL+A  RK P+   VDL  +A  K     SG                  + S                    D  P  I+  HFE+A+     SVS+  I++Y+  ++T +
Sbjct:  548 LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLA--KMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP-EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 763

HSP 2 Score: 87.8113 bits (216), Expect = 6.966e-17
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++K  GESE  +R  F  A   +P I+F DE+DA+  KR K  G V  R+++QLL  +DG  +R  V V+ ATNRP+ +D A+ R GRF + + + +P    R  IL+   +   + D VDL  +A
Sbjct:  275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVA 400
[Close]
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.308e-31
Identity = 79/218 (36.24%), Postives = 116/218 (53.21%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKL---ISSKSSSDVTPFT-----------IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608
            L  + GESE  VR +F +AR  +PC+LFFDE+D++   RG    +GG   +R++NQ+L E+DG   +K VF+IGATNRPD++D A+LRPGR  +L+Y+PLP    R  IL+A  RK P+   VDL  +A  K     SG                  +   I  +      P             I+  HFE+A+     SVS+  I++Y+  ++T +
Sbjct:  548 LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLA--KMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 763

HSP 2 Score: 88.5817 bits (218), Expect = 4.084e-17
Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++K  GESE  +R  F  A   +P I+F DE+DA+  KR K  G V  R+++QLL  +DG  +R  V V+ ATNRP+ +D A+ R GRF + + + +P    R  IL+   +   + D VDL  +A
Sbjct:  275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVA 400
The following BLAST results are available for this feature:
BLAST of CN189219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
CD48E_ARATH4.065e-3336.07Cell division control protein 48 homolog E OS=Arab... [more]
PEX6_YEAST5.309e-3336.68Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisia... [more]
RIX7_YEAST1.183e-3236.70Ribosome biogenesis ATPase RIX7 OS=Saccharomyces c... [more]
TERA_DANRE4.494e-3236.70Transitional endoplasmic reticulum ATPase OS=Danio... [more]
TERA_RAT5.870e-3236.53Transitional endoplasmic reticulum ATPase OS=Rattu... [more]
TERA_PIG5.870e-3236.53Transitional endoplasmic reticulum ATPase OS=Sus s... [more]
TERA_MOUSE5.870e-3236.53Transitional endoplasmic reticulum ATPase OS=Mus m... [more]
TERA_HUMAN5.870e-3236.53Transitional endoplasmic reticulum ATPase OS=Homo ... [more]
TERA_BOVIN5.870e-3236.53Transitional endoplasmic reticulum ATPase OS=Bos t... [more]
TERA_XENTR1.308e-3136.24Transitional endoplasmic reticulum ATPase OS=Xenop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0001I02_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189219 ID=CN189219; Name=CN189219; organism=Citrus sinensis; type=EST; length=761bp
GAGGCCTGAATAAATATGTTGGAGAAAGTGAGCTGGCAGTTCGAACATTA
TTCAGTCGTGCAAGAACATGTTCACCATGCATACTTTTCTTTGATGAGGT
GGATGCTCTGACTACAAAGCGTGGAAAAGAAGGAGGTTGGGTTGTTGAGC
GTCTTTTGAACCAGTTACTCATAGAGTTAGACGGGGCAGACAAGCGGAAG
GGTGTCTTTGTCATCGGTGCAACCAATAGGCCTGATGTGATGGATCGTGC
TGTCTTAAGGCCTGGGAGGTTTGGTAAACTCCTCTATGTCCCTCTTCCCA
CTCCAGATGAGCGCGGGTTGATATTGGAAGCTCTTGCTAGGAAGAAGCCA
ATAGATGACAGTGTTGATTTGCACACCATTGCACAATCAAAGTTTTGTGA
GAATTTAAGTGGAGCTGATCTTGCTGCAATGATGAATGAAGCTGCAATGG
CTGCCTTGGAAGATAAACTGATATCAAGCAAGAGCTCCTCGGATGTGACT
CCATTTACAATCAAGTTAACTCATTTTGAGCAAGCACTAAGTAAAATCTC
ACCATCTGTCTCAGAATTGCAAATACAGAGGTACAAGACCCTGTCAGAGA
CCTTCAAAGCAGCATGAGAAGAAGTATAAATTATTTCCTGAAGGCTTTTG
AGTGTGCTTAACTGCCAAATTATTTAAAGAATCACATGGCTTATGTGAGA
ATCAAGAGCGAGTGGCTTCACTGTGTTCCCCTTGTATTTCTACTTCATCG
TGGGGCAAAAA
back to top