CN189219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.314e-20 Identity = 54/130 (41.54%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 + KY+GE VR LF A+ +P I+F DE+DA+ R + G V+R L QLL +DG + R V +IGATNR D++D A+LRPGRF +++ +PLP + R IL+ R + + VDL +A+ Sbjct: 224 VQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVAR 353
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.022e-20 Identity = 57/139 (41.01%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 413 + K++GE VR LF AR +P I+F DE+DA+ +R ++ G V+R L QLL E+DG D + VI ATNR D++D A+LRPGRF + + +PLP + R I + R + + VDL +A K E SG Sbjct: 250 VQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLA--KITEGASG 386
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.022e-20 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 +VG VR LF +A+ SPCI+F DE+DA+ +RG GG ER LNQLL+E+DG R GV +I ATNRPD++D A+LRPGRF + + V P R +L ++ KP+ DL +A+ Sbjct: 236 FVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAK 362
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.022e-20 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 +VG VR LF +A+ SPCI+F DE+DA+ +RG GG ER LNQLL+E+DG R GV +I ATNRPD++D A+LRPGRF + + V P R +L ++ KP+ DL +A+ Sbjct: 236 FVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAK 362
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.022e-20 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 +VG VR LF +A+ SPCI+F DE+DA+ +RG GG ER LNQLL+E+DG R GV +I ATNRPD++D A+LRPGRF + + V P R +L ++ KP+ DL +A+ Sbjct: 236 FVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAK 362
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.946e-20 Identity = 56/129 (43.41%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383 + +VG R LF++A+ SPCI+F DE+DA+ RG G E+ LNQ+L E+DG GV VI ATNRP+++D A+LRPGRF + + V LP R IL+ +R K +D V L IA Sbjct: 294 IEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIA 422
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.154e-20 Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 + KY+GE VR LF A+ +P I+F DE+DA+ R G V+R L QLL E+DG D R V ++ ATNR D++DRA+LRPGRF +++ +PLP R IL+ + I + V+L +++ Sbjct: 224 VQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSR 353
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.154e-20 Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 +VG VR +F +A+ +PC++F DE+DA+ +RG GG ER LNQ+L+E+DG GV VI ATNRPDV+D A+ RPGRF + + V LP R IL+ RK + VD T+A+ Sbjct: 224 FVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLAR 350
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: SPA5L_HUMAN (Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens GN=SPATA5L1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.731e-20 Identity = 72/215 (33.49%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRG--KEGGWVVERLLNQLLIELDGAD----KRKG---------------VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLIS-SKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTL 593 +VG+SE + +F +AR +P ILF DE+D++ R K G V ER+L+ LL ELDG +R+G V +I ATNRPDV+D A+LRPGR K++Y+P P R IL+ + PI V L ENL+ L++ ++ D T T+K HF ++L + PS+S + Y+ L Sbjct: 538 FVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSL---------ENLAAETCFFSGADLRNLCTEAALLALQENGLDAT--TVKQEHFLKSLKTVKPSLSCKDLALYENL 741 HSP 2 Score: 92.8189 bits (229), Expect = 2.165e-18 Identity = 54/125 (43.20%), Postives = 75/125 (60.00%), Query Frame = 3 Query: 21 GESELAVRTLFSRARTCS---PCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 GE+E VR +F RAR + P +LF DE+DAL +RG R++ Q+L LDGA + V V+GATNRPD +D A+ RPGRF + + + PT +R IL+ + K PI VDL +A+ Sbjct: 276 GETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRAP--ESRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAE 398
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.731e-20 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 +VG VR LF +A++ +PCI+F DE+DA+ +RG G E+ +NQLL E+DG GV V+ ATNRPDV+D A+LRPGRF + + V P R IL+ +R K + VD IA+ Sbjct: 326 FVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIAR 452 The following BLAST results are available for this feature:
BLAST of CN189219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 359
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189219 ID=CN189219; Name=CN189219; organism=Citrus sinensis; type=EST; length=761bpback to top |