CN189219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX6_DEBHA (Peroxisomal biogenesis factor 6 OS=Debaryomyces hansenii GN=PEX6 PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.308e-31 Identity = 87/240 (36.25%), Postives = 132/240 (55.00%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGAD-----KRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDER-GLILEALARKKPIDDSVDLHTIAQ--------SKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSD--------------VTP----FTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA*EE 623 LN Y+GESE VR +F +AR PC++FFDE+D++ KRG +G G V++R+++QLL ELDG GVFV+GATNRPD++D A+LRPGRF K+LY+ + DE+ ILEAL RK + D+VDL+ IA+ + F S K ++ + +S TP +++ F++A S+++PSVS +++ Y + E F+ E+ Sbjct: 909 LNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIAKRCSFTFTGADFYALCSDSMLNAMTRTANEVDAKIKKLNEELTSQGKEEISTRWWFDNAATPEDIDVLVQMEDFKKAQSELAPSVSAEELEHYLRVRENFEGGKEK 1148
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31 Identity = 73/134 (54.48%), Postives = 97/134 (72.39%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGA----DKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPL-PTPDERGLILEALARKKPIDDSVDLHTIAQ 386 LN Y+GESE VR +F RAR PC++FFDE+D++ KRG +G G V++R+++QLL ELDG D GVFVIGATNRPD++D A+LRPGRF K+LY+ + T D++ ILEAL RK + SV LH++AQ Sbjct: 1064 LNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQ 1197
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31 Identity = 83/207 (40.10%), Postives = 117/207 (56.52%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG-GWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA*EE 623 L+K+VGESE A+R +F +A+ +P I+F DE+D++ +RG V ER++NQLL LDG + GV VIGATNRPD+MD A+LR GRF KL+Y+P P + R IL+ + P+ VDL+ IAQ E G + + + + D T ++ +F AL I PSV E I+ Y+TLSET + E Sbjct: 538 LSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQR--TEGYVGADLENLCREAG-------MNAYRENPDAT--SVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKSVSE 733 HSP 2 Score: 92.4337 bits (228), Expect = 2.828e-18 Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLS 410 ++KY G+SE +R +FS+A +P I+F DE+D++ KR + G V R++ QLL +DG +R V VIGATNR D +D A+ RPGRF + + + +P + R IL R P+ S + ++KF E ++ Sbjct: 261 MSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEE----EKNKFLEEMA 391
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX6_PICAN (Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31 Identity = 84/231 (36.36%), Postives = 129/231 (55.84%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDG---ADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPL-PTPDERGLILEALARKKPIDDSVDLHTIAQS-----------KFCEN--------LSGXXXXXXXXXXXXXXXXXKL-----ISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608 LN Y+GESE VR +F +AR PC++FFDE+D++ KRG +G G V++R+++QLL ELDG A+ GVFV+GATNRPD++D A+LRPGRF K+LY+ + T +++ I++AL RK +D SVDL IA++ C + +G K+ + + + T +K F +A ++ PSVS ++Q Y ++ E F+ Sbjct: 883 LNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAMTRTAGAVEKKINEYNCNREEGDKISTRFWFDNIAKPEDTQVLVKSEDFAKARDELVPSVSAEELQHYLSVRENFE 1113
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31 Identity = 78/205 (38.05%), Postives = 117/205 (57.07%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG-GWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKL----THFEQALSKISPSVSELQIQRYKTLSETF 605 L+K+VGESE VR +F +AR +PC++FFDE+D+L +RG G V ER+++QLL ELDG ++ K V VI ATNRPD++D A+LRPGR + +Y+P P R I + R KP+ D V++ +A+ E SG + + + KL HFE+AL K+ PS+++ +++Y+ L E F Sbjct: 526 LSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEK--TEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDVEKYEKLIEDF 728 HSP 2 Score: 105.531 bits (262), Expect = 3.228e-22 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 ++KY GESE +R +F A+ +P I+F DE+D++ KR + G V R++ QLL +DG + R V VI ATNRPD +D A+ RPGRF + + + +P + R ILE RK P+ + VDL +A+ Sbjct: 253 MSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAE 379
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31 Identity = 78/218 (35.78%), Postives = 116/218 (53.21%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKL---ISSKSSSDVTPFT-----------IKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608 L + GESE VR +F +AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG +K VF+IGATNRPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VD+ +A K SG + I + P I+ HFE+A+ SVS+ I++Y+ ++T + Sbjct: 548 LTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLA--KMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQ 763 HSP 2 Score: 88.5817 bits (218), Expect = 4.084e-17 Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383 ++K GESE +R F A +P I+F DE+DA+ KR K G V R+++QLL +DG +R V V+ ATNRP+ +D A+ R GRF + + + +P R IL+ + + D VDL +A Sbjct: 275 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVA 400
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31 Identity = 77/218 (35.32%), Postives = 114/218 (52.29%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ--------------SKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608 L + GESE VR +F +AR+ +PC+LFFDE+D++ RG + G +R++NQ+L E+DG +K VF+IGATNRPD++D A+LRPGR +L+Y+PLP R IL+A RK P+ VDL IA+ + C+ D P I HFE+A+ SVS+ I++Y+ ++T + Sbjct: 545 LTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVP-EITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQ 761 HSP 2 Score: 88.9669 bits (219), Expect = 3.127e-17 Identity = 59/188 (31.38%), Postives = 90/188 (47.87%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCE---NLSGXXXXXXXXXXXXXXXXXKLISSKSSSDV-TPFTIKLTHFEQALSKISPS 557 ++K GESE +R F A SP I+F DE+DA+ KR K G V R+++QLL +DG K + V+ ATNRP+ +D A+ R GRF + + + +P R +L + + D VDL IA +L+ L K ++V + + +F A++K SPS Sbjct: 272 MSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPS 459
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX6_PICPA (Peroxisomal biogenesis factor 6 OS=Pichia pastoris GN=PEX6 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.221e-30 Identity = 69/134 (51.49%), Postives = 97/134 (72.39%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGG--WVVERLLNQLLIELD---GADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPL-PTPDERGLILEALARKKPIDDSVDLHTIAQS 389 LN Y+GESE VR +F RAR PC++FFDE+D++ KRG +G V++R+++QLL ELD G D GVFV+GATNRPD++D A+LRPGRF K+LY+ + T +++ I+EAL+RK + SVDL +A+S Sbjct: 889 LNMYIGESEANVRKVFQRARDAKPCVVFFDELDSVAPKRGNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAES 1022
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX6_MOUSE (Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.221e-30 Identity = 81/208 (38.94%), Postives = 120/208 (57.69%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEG--GWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGL-ILEALARKKPIDDSVDLHTIAQSKFC-ENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFE--QALSKISPSVSELQIQRYKTLSETFKA 611 +N YVG+SE VR +F+RAR +PCI+FFDE+D+L RG+ G G V++R+++QLL ELDG + VFVIGATNRPD++D A+LRPGRF KL++V L +L A+ RK ++ SV L + C L+G ++ + ++ + LT + QA +++ PSVSE ++ RYK + F A Sbjct: 775 INMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDC--CPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRIQRKFAA 980
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.207e-30 Identity = 77/222 (34.68%), Postives = 120/222 (54.05%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK----EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ----------SKFCENL-------SGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFK 608 L + GESE VR +F +AR +PC+LFFDE+D++ RG +GG +R++NQ+L E+DG + +K VF+IGATNRPD++D AVLRPGR +L+Y+PLP R IL+A RK P+ +DL +A+ ++ C+ S + + + D P I HFE+A+ SV++ I++Y+ ++T + Sbjct: 554 LTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVP-EITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQ 774 HSP 2 Score: 86.6557 bits (213), Expect = 1.552e-16 Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383 ++K GESE +R F P ILF DE+DA+ KR K G V R+++QLL +DG R + VI ATNRP+ +D A+ R GRF + + + +P R IL + + D VDL IA Sbjct: 281 MSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIA 406 The following BLAST results are available for this feature:
BLAST of CN189219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 359
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189219 ID=CN189219; Name=CN189219; organism=Citrus sinensis; type=EST; length=761bpback to top |