CN189219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.515e-16 Identity = 69/206 (33.50%), Postives = 100/206 (48.54%), Query Frame = 3 Query: 9 NKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADK--RKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKK--PIDDSVDLHTIAQSKFCENLSG---XXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETF 605 +KYVGE E VR LFS AR P I+F DEVD+L +R + RL + LIE DG V V+GATNRP +D AVLR RF K +YV LP + R ++L+ L K+ P+ + S+ E SG + + + ++S++ +K + F +L KI SVS ++ Y ++ F Sbjct: 397 SKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEK---ELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKNMAASEMR--NMKYSDFLGSLKKIKCSVSHSTLESYIRWNQDF 595
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.515e-16 Identity = 67/207 (32.37%), Postives = 97/207 (46.86%), Query Frame = 3 Query: 9 NKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGA-------DKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLIS------SKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYK 587 +KY GESE VR LF AR +P +F DE+D++ ++RG E R+ +LL+++DG D K V V+ ATN P +D A+ R R K +Y+PLP+ R +L R+ + D VDL IA+ E SG ++ S D + FE AL K+S SVS I++Y+ Sbjct: 281 SKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEK--MEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDEMHMPTTMEDFEIALKKVSKSVSAADIEKYE 483
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.515e-16 Identity = 67/216 (31.02%), Postives = 104/216 (48.15%), Query Frame = 3 Query: 9 NKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGA-------DKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKL--ISSKS----SSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA 614 +KY GESE VR LF AR +P +F DE+D++ ++RG + R+ ++LLI++DG D K V V+ ATN P +D A+ R R K +Y+PLPT R +L+ R+ +D + L IA+ E SG ++ +S + S + + FE AL KI+ SVS +++Y+ F +A Sbjct: 279 SKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEK--IEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYEKWMVEFGSA 490
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.515e-16 Identity = 67/216 (31.02%), Postives = 104/216 (48.15%), Query Frame = 3 Query: 9 NKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRG-KEGGWVVERLLNQLLIELDGA-------DKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKL--ISSKS----SSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA 614 +KY GESE VR LF AR +P +F DE+D++ ++RG + R+ ++LLI++DG D K V V+ ATN P +D A+ R R K +Y+PLPT R +L+ R+ +D + L IA+ E SG ++ +S + S + + FE AL KI+ SVS +++Y+ F +A Sbjct: 279 SKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEK--IEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYEKWMVEFGSA 490
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 39 VRTLFSRARTCSPCILFFDEVDALTTKRGKE----GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 413 VR+LF AR +PCI++ DE+DA+ KR E+ LNQLL+E+DG V V+ +TNR D++D A++RPGR + +++ LPT ER I E + + S ++ ++ SG Sbjct: 390 VRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSG 518
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRAR--------TCSPCILFFDEVDALTTKRGKEGG--WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 317 LNKYVGESE +R LF+ A I+ FDE+DA+ +RG G V + ++NQLL ++DG ++ + VIG TNRPD++D A+LRPGR + + L PDE+G Sbjct: 291 LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGL--PDEKG 402
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRAR--------TCSPCILFFDEVDALTTKRGKEGG--WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 317 LNKYVGESE +R LF+ A I+ FDE+DA+ +RG G V + ++NQLL ++DG ++ + VIG TNRPD++D A+LRPGR + + L PDE+G Sbjct: 291 LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGL--PDEKG 402
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRAR--------TCSPCILFFDEVDALTTKRGKEGG--WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 317 LNKYVGESE +R LF+ A I+ FDE+DA+ +RG G V + ++NQLL ++DG ++ + VIG TNRPD++D A+LRPGR + + L PDE+G Sbjct: 291 LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGL--PDEKG 402
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRAR--------TCSPCILFFDEVDALTTKRGKEGG--WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 317 LNKYVGESE +R LF+ A I+ FDE+DA+ +RG G V + ++NQLL ++DG ++ + VIG TNRPD++D A+LRPGR + + L PDE+G Sbjct: 291 LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGL--PDEKG 402
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.897e-16 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRAR--------TCSPCILFFDEVDALTTKRGKEGG--WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERG 317 LNKYVGESE +R LF+ A I+ FDE+DA+ +RG G V + ++NQLL ++DG ++ + VIG TNRPD++D A+LRPGR + + L PDE+G Sbjct: 291 LNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGL--PDEKG 402 The following BLAST results are available for this feature:
BLAST of CN189219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 359
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189219 ID=CN189219; Name=CN189219; organism=Citrus sinensis; type=EST; length=761bpback to top |