CN189219

Overview
NameCN189219
Unique NameCN189219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: SPAT5_HUMAN (Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.552e-27
Identity = 74/200 (37.00%), Postives = 105/200 (52.50%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE--GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSE 599
            +NKYVGESE AVR  F +AR  +P I+FFDE+DAL  +RG     G V +R+L QLL E+DG ++ K V ++ ATNRPD +D+A++RPGR  +++YVPLP    R  I +      P+ + VDL  +      +  SG                          D+    I   HF QALS ++P + E   + Y+   E
Sbjct:  698 MNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQ--TDAYSGAEIVAVCREAALLAL---------EEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQE 886          

HSP 2 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKG---VFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKP 350
            ++K+ GE+E  +R +F+ A    P I+F DE+DAL  KR      V +R++  LL  +DG         V V+GATNRP  +D A+ RPGRF K + + +P   +R  IL+ L R+ P
Sbjct:  424 ISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVP 541          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.425e-27
Identity = 59/126 (46.83%), Postives = 85/126 (67.46%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            L+KY+G SE AVR +F RA+   PCILFFDE +++  +RG +   V +R++NQLL +LDG +  +GV+V+ AT+RPD++D A+LRPGR  K +Y P P    R  IL  L++   + D VDL  +A
Sbjct:  912 LSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVA 1037          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.267e-26
Identity = 58/126 (46.03%), Postives = 83/126 (65.87%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            LNKY+G SE  VR +FSRA +  PC+LFFDE D++  +RG +   V +R++NQ L +LDG +   GV+V+ AT+RPD++D A+LRPGR  K LY  +P  +ER  IL  L  K  +  S+ L  ++
Sbjct:  937 LNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLS 1062          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.813e-26
Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPID 356
            LNK++G SE  +R LF RA++  PCILFFDE D++  KRG +   V +R++NQLL ++DGA+   GV+++ AT+RPD++D A+LRPGR  K +   +PT  ER  IL+A+   K  D
Sbjct:  768 LNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKD 884          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.286e-26
Identity = 58/127 (45.67%), Postives = 88/127 (69.29%), Query Frame = 3
Query:    9 NKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386
            +K+VGESE A+R +F +AR  +PCI+FFDE+DA+  KRG++    V ++++NQLL ELDG ++ K V VI ATNRPD++D A+LRPGR  +++ VP+P    R  I +   R   + + V+L  +A+
Sbjct:  524 SKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAK 650          

HSP 2 Score: 101.679 bits (252), Expect = 4.662e-21
Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++KYVGE+E  +R +F  A   +P I+F DE+DA+  KR +  G V  RL+ QLL  +DG   R  V VIGATNRP+ +D A+ RPGRF + + + +P  + R  IL+   R  P+ + VDL  +A
Sbjct:  250 MSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLA 375          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: CD48B_ARATH (Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.389e-25
Identity = 62/128 (48.44%), Postives = 79/128 (61.72%), Query Frame = 3
Query:   15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGG----WVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386
            YVGE E  +R  F RAR  SP I+FFDE D +  KRG E       V ERLL+ LL E+DG ++ KG+ V+ ATNRP  +D A++RPGRF  +LYVP P  + R  IL+   R   + D VDL  IA+
Sbjct:  360 YVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAE 487          

HSP 2 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 59/190 (31.05%), Postives = 89/190 (46.84%), Query Frame = 3
Query:   15 YVGESELAVRTLFSRARTCS----PCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDG---ADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVS 563
            + GESE  +R  F+ A + +    P ++F DE+D L  +R       V R+ +QL   +D    +     V V+ +TNR D +D A+ R GRF  L+ V  P  ++R  IL+   +K  +D SVDL  IA S  C    G                  + +SK SSD    T +   F+ A S + PS++
Sbjct:   96 HAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDV-RIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAIS--CNGYVG-------ADLEALCREATISASKRSSDSLILTSQ--DFKIAKSVVGPSIN 273          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: AFG2_SCHPO (ATPase family gene 2 protein OS=Schizosaccharomyces pombe GN=afg2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.321e-25
Identity = 73/198 (36.87%), Postives = 109/198 (55.05%), Query Frame = 3
Query:    9 NKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSET 602
            +K+VGESE AVR +F +AR  SP ++FFDE+DALT  RG++     +R++  LL ELDG +  + V V+ ATNRPD++D A++RPGR  +LLYV  P  + R  I++  A K    + VDL  IA+    E  SG                  LI+     D+    I   HF+ AL  +  +++   ++ Y + SE+
Sbjct:  620 DKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNS--SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEK--TEGCSGAEVVALCQEAG-------LIA--MHEDLEAKEICQAHFKTALLALRKAITRDMLEYYASFSES 804          

HSP 2 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKP 350
            + KY+GE+E  +R +F  AR   P I+F DE+DAL  KR ++      R +  LL  LDG      V VI ATNRP+ +D A+ RPGR  K + + +P    R  I++ L    P
Sbjct:  350 VGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVP 464          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.950e-25
Identity = 69/204 (33.82%), Postives = 111/204 (54.41%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGW-VVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYKTLSETFKAA 614
            L+K+VGESE A+R  F +AR  +P ++FFDE+D+L   RG+ GG  V ER++NQLL ELDG ++ + V VI ATNRPD++D A++R GRF +L+ V  P  + R  IL+   +  P+   V L  +A+       +                   L   + + DV      + HF  A+  + P++++  ++ Y  + + FK +
Sbjct:  533 LSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAER------ADGYVGSDLANIAREAAIEALRDDEDADDV-----GMAHFRAAMENVRPTITDDLMEYYDQVEDQFKGS 725          

HSP 2 Score: 95.9005 bits (237), Expect = 2.558e-19
Identity = 53/126 (42.06%), Postives = 76/126 (60.32%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383
            ++KY GESE  +R +F  A+  SP I+F DE+D++  KR    G V  R++ QLL  +DG + R  V VI ATNR D +D A+ RPGRF + + + +P    R  IL+   R  P+ D V+L T+A
Sbjct:  260 ISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLA 385          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.185e-24
Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWV---VERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 413
            + KY+G+    VR +F  AR  +P I+F DE+D++  +R  E       V+R L QLL E+DG DKRK + +I ATNRPDV+D A+LRPGRF +L++VP+P  + RG IL+    K  + + +D   +A  K  E +SG
Sbjct:  230 VQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLA--KATEGMSG 366          
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: AFG2_YEAST (ATPase family gene 2 protein OS=Saccharomyces cerevisiae GN=AFG2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.185e-24
Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 3
Query:    9 NKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDS-VDLHTIAQSKFCENLSGXXXXXXXXXXXXXXXXXKLISSKSSSDVTPFTIKLTHFEQALSKISPSVSELQIQRYK 587
            NKYVGESE A+R +F +AR+ +P I+FFDE+DAL+  R          +L  LL E+DG ++ KGV ++ ATNRPD +D A+LRPGR  + +YV  P  + R  IL+   +K   ++S VDLH +A     E  SG                  L  +K         ++L HFE+A   I+  ++   +  Y+
Sbjct:  588 NKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADR--TEGYSGAEVVLLCQEAGLAAIMEDLDVAK---------VELRHFEKAFKGIARGITPEMLSYYE 770          

HSP 2 Score: 80.4925 bits (197), Expect = 1.112e-14
Identity = 44/108 (40.74%), Postives = 66/108 (61.11%), Query Frame = 3
Query:    6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLIL 326
            ++KY+GE+E A+R +F+ AR   P I+F DE+D++   R  +  G V  R++  LL  +DG      V VI ATNRP+ +D A+ RPGRF + + + +P  D R  IL
Sbjct:  316 VSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDIL 423          
The following BLAST results are available for this feature:
BLAST of CN189219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
SPAT5_HUMAN2.552e-2737.00Spermatogenesis-associated protein 5 OS=Homo sapie... [more]
PEX1_MOUSE7.425e-2746.83Peroxisome biogenesis factor 1 OS=Mus musculus GN=... [more]
PEX1_DICDI1.267e-2646.03Peroxisome biogenesis factor 1 OS=Dictyostelium di... [more]
PEX1_YEAST4.813e-2647.86Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisia... [more]
Y1156_METJA6.286e-2645.67Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
CD48B_ARATH2.389e-2548.44Cell division control protein 48 homolog B OS=Arab... [more]
AFG2_SCHPO5.321e-2536.87ATPase family gene 2 protein OS=Schizosaccharomyce... [more]
CDCH_HALSA6.950e-2533.82Protein cdcH OS=Halobacterium salinarium GN=cdcH P... [more]
PSMR_METMA1.185e-2443.17Proteasome-activating nucleotidase OS=Methanosarci... [more]
AFG2_YEAST1.185e-2436.08ATPase family gene 2 protein OS=Saccharomyces cere... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001I02_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189219 ID=CN189219; Name=CN189219; organism=Citrus sinensis; type=EST; length=761bp
GAGGCCTGAATAAATATGTTGGAGAAAGTGAGCTGGCAGTTCGAACATTA
TTCAGTCGTGCAAGAACATGTTCACCATGCATACTTTTCTTTGATGAGGT
GGATGCTCTGACTACAAAGCGTGGAAAAGAAGGAGGTTGGGTTGTTGAGC
GTCTTTTGAACCAGTTACTCATAGAGTTAGACGGGGCAGACAAGCGGAAG
GGTGTCTTTGTCATCGGTGCAACCAATAGGCCTGATGTGATGGATCGTGC
TGTCTTAAGGCCTGGGAGGTTTGGTAAACTCCTCTATGTCCCTCTTCCCA
CTCCAGATGAGCGCGGGTTGATATTGGAAGCTCTTGCTAGGAAGAAGCCA
ATAGATGACAGTGTTGATTTGCACACCATTGCACAATCAAAGTTTTGTGA
GAATTTAAGTGGAGCTGATCTTGCTGCAATGATGAATGAAGCTGCAATGG
CTGCCTTGGAAGATAAACTGATATCAAGCAAGAGCTCCTCGGATGTGACT
CCATTTACAATCAAGTTAACTCATTTTGAGCAAGCACTAAGTAAAATCTC
ACCATCTGTCTCAGAATTGCAAATACAGAGGTACAAGACCCTGTCAGAGA
CCTTCAAAGCAGCATGAGAAGAAGTATAAATTATTTCCTGAAGGCTTTTG
AGTGTGCTTAACTGCCAAATTATTTAAAGAATCACATGGCTTATGTGAGA
ATCAAGAGCGAGTGGCTTCACTGTGTTCCCCTTGTATTTCTACTTCATCG
TGGGGCAAAAA
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