CN189219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.893e-22 Identity = 60/127 (47.24%), Postives = 80/127 (62.99%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 +VG VR +F AR +PCI+F DE+DA+ +RG GG ER LNQ+L+E+DG D +GV +I ATNRPDV+D A+LRPGRF + + V LP R IL+ RK P+ + VD IA+ Sbjct: 225 FVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIAR 351
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.472e-22 Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 413 + K++GE VR +F A+ SPCI+F DE+DA+ +KR + G V+R L QLL E+DG D R V +I ATNRPD++D A+LRPGRF +++ + P D R I + K I SVDL IA K EN+ G Sbjct: 219 VKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIA--KMAENMVG 354
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.228e-22 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 + KY+GE VR +F A+ SP I+F DE+DA+ KR K G V+R L QLL ELDG + R V ++ ATNRPD++D A+LRPGRF + + VPLP D R IL+ + + VD+ +A+ Sbjct: 222 VRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLAR 351
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.192e-22 Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQSKFCENLSG 413 + KY+GE VR +F A+ +P I+F DE+DA+ +R G V+R + QLL ELDG D R V VIGATNR D++D A+LRPGRF +++ VPLPT + R I + RK + + VD +A + E SG Sbjct: 212 VQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELA--RITEGASG 348
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.192e-22 Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 +VG VR +F +R +PCI+F DE+DA+ +RG GG ER LNQ+L+E+DG D +G+ +I ATNRPDV+D A+LRPGRF + ++V LP R I++ +K P+ ++VD IA+ Sbjct: 225 FVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIAR 351
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.192e-22 Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE-GGWVVER--LLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIA 383 +VG VR LF A+ +PC++F DE+DA+ +RG GG ER LNQLL+E+DG +G+ +I ATNR D++D A+LRPGRF + + V P R +L+ AR KP+D++V+L +IA Sbjct: 234 FVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIA 359
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.227e-21 Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 + K++GE V+ +F A+ +P I+F DE+DA+ KR G V+R L QLL E+DG D R V +IGATNRPD++D A+LRPGRF +++ VP P R IL+ RK + + V+L IA+ Sbjct: 241 VKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAK 370
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.227e-21 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 3 Query: 18 VGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGK---EGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 VG VR LF++A+ +PCI+F DE+D++ +KRG+ VVE+ LNQLL E+DG R GV V+ ATNR DV+D A+LRPGRF + + + LP ER IL+ A+ K + + L +A+ Sbjct: 302 VGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAK 427
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.227e-21 Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 3 Query: 15 YVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 +VG VR LFS A+ CSPCI+F DE+DA+ R + ++ LNQ+L+ELDG + +G+ V+ ATN P+ +D+A++RPGRF + + VP P + R ILE+ K + VDL IA+ Sbjct: 300 FVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIAR 423
BLAST of CN189219 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.602e-21 Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 3 Query: 6 LNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKE---GGWVVERLLNQLLIELDGADKRKGVFVIGATNRPDVMDRAVLRPGRFGKLLYVPLPTPDERGLILEALARKKPIDDSVDLHTIAQ 386 + KY+GE V LF A+ +P I+F DE+DA+ KR E G V R L QLL E+DG D R V VI ATNRPD++D A+LRPGRF +L+ VPLP + R IL+ R+ + +VDL IA+ Sbjct: 211 VRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAE 339 The following BLAST results are available for this feature:
BLAST of CN189219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 359
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189219 ID=CN189219; Name=CN189219; organism=Citrus sinensis; type=EST; length=761bpback to top |