CN189215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: U533_CAEEL (UPF0533 protein C56C10.7 OS=Caenorhabditis elegans GN=C56C10.7 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24 Identity = 73/228 (32.02%), Postives = 110/228 (48.25%), Query Frame = 1 Query: 58 SSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVK----EITFLEACIENHTKSNLY 726 +S+ LA RVMRL RP DP D P ++ K S+++ SR + + L+ PQ F IYLGETF Y+++ N S V V +K E+QT QR++L + +ES + G+ ++ H+VKE+G H L+C+ Y GE Y +FFKF VS P+ V+TK + + +LEA IEN + +N++ Sbjct: 6 ASSSSQQLLALRVMRLARPKFAPVDGFSHDPVD------------------PTGFGELLAGKVSEISKESR-------QDLPIGEYLIAPQMFENIYLGETFTFYVNVVNESEKTVSSVSLKCELQTSTQRVVLPCSVQDATIESSKCEGQ---VISHEVKEIGQHILICSVNYKTSNGENMYFRKFFKFPVSKPIDVKTKFYSAEDNANQDVYLEAQIENTSNANMF 205
BLAST of CN189215 vs. ExPASy Swiss-Prot
Match: U533_CAEBR (UPF0533 protein CBG04321 OS=Caenorhabditis briggsae GN=CBG04321 PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.418e-24 Identity = 75/229 (32.75%), Postives = 113/229 (49.34%), Query Frame = 1 Query: 55 MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVK----EITFLEACIENHTKSNLY 726 +S++ LA RVMRL RP DP D P ++ K ++++ SR HD + + L+ PQ F IYLGETF Y+++ N S V +V +K E+QT QR++L +ES + G+ ++ H+VKE+G H L+C+ Y GE Y +FFKF VS P+ V+TK + + +LEA IEN + SN++ Sbjct: 5 ISNSSTQQLLALRVMRLARPKFAPLDGFSHDPVD------------------PTGFGELLAGKVAEISKESR---HD----LPIGEYLIAPQMFENIYLGETFTFYVNVVNESESNVVNVSLKCELQTSTQRVVLPCSVQDVTIESTKCDGQ---VISHEVKEIGQHILICSVNYKTLSGENMYFRKFFKFPVSKPIDVKTKFYSAEDNANQDVYLEAQIENTSNSNMF 205 The following BLAST results are available for this feature:
BLAST of CN189215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189215 ID=CN189215; Name=CN189215; organism=Citrus sinensis; type=EST; length=728bpback to top |