CN189212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA4_MAIZE (Glutamine synthetase root isozyme 4 OS=Zea mays GN=GLN5 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 8.357e-62 Identity = 114/134 (85.07%), Postives = 123/134 (91.79%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITEIAGVV++FDPKPI GDWNGAGAH NYST+SMR +GG +VIK AIEKL RH EHIAAYGEGNERRLTGRHETADINTFSWGVANRGAS+ VG+ TE+ GKGYFEDRRPASNMDPYVVTSMIAETTI+WKP Sbjct: 223 RITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASVAVGQ-TEQNGKGYFEDRRPASNMDPYVVTSMIAETTIVWKP 355
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA_NICPL (Glutamine synthetase OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.091e-61 Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = -3 Query: 225 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 623 RI EIAGVV+SFDPKPI GDWNGAGAH NYSTKSMR DGG +VI KAIEKLG +H EHIAAYGEGNERRLTG+HETA+I+TF WGVANRGAS+RVGRDTEK GKGYFEDRRPASNMDPYVVT+MIA+TTI+ K Sbjct: 223 RIAEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMREDGGYEVILKAIEKLGLKHKEHIAAYGEGNERRLTGKHETANISTFKWGVANRGASVRVGRDTEKAGKGYFEDRRPASNMDPYVVTAMIADTTIIGK 355
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.862e-61 Identity = 111/131 (84.73%), Postives = 121/131 (92.37%), Query Frame = -3 Query: 231 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 623 RITEIAGVV+S DPKPI GDWNGAGAH NYSTKSMRN+GG ++IKKAI KL +H +HIAAYGEGNERRLTG+HETA I+ FSWGVANRGAS+RVGRDTEKEGKGYFEDRRPASNM+PYVVTSMIAETTIL Sbjct: 222 RITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGFEIIKKAIAKLETKHAQHIAAYGEGNERRLTGKHETASIHKFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMEPYVVTSMIAETTIL 352
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLN15_ARATH (Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.862e-61 Identity = 109/131 (83.21%), Postives = 124/131 (94.66%), Query Frame = -3 Query: 231 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 623 RITEI GV++SFDPKPI+GDWNGA AH N+STKSMR DGG+D+IK+AI+KL +H +HIAAYGEGNERRLTG+HETADINTFSWGVA+RGAS+RVGRDTEKEGKGYFEDRRP+SNMDPY+VTSMIAETTIL Sbjct: 223 RITEICGVIVSFDPKPIQGDWNGAAAHTNFSTKSMRKDGGLDLIKEAIKKLEVKHKQHIAAYGEGNERRLTGKHETADINTFSWGVADRGASVRVGRDTEKEGKGYFEDRRPSSNMDPYLVTSMIAETTIL 353
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.148e-61 Identity = 110/134 (82.09%), Postives = 119/134 (88.81%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITE AGVVLS DPKPI+GDWNGAG H NYSTKSMR DGG +VIKKAI L RH EHI+AYGEGNERRLTG+HETA INTFSWGVANRG SIRVGRDTEK GKGY EDRRPASNMDPYVVTS++AE+T+LW+P Sbjct: 280 RITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASINTFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTSLLAESTLLWEP 413
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 7.822e-60 Identity = 107/134 (79.85%), Postives = 119/134 (88.81%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR DGG +VIKKAI L RH EHI+AYGEGNERRLTG+HETA I+ FSWGVANRG SIRVGRDTEK+GKGY EDRRPASNMDPY+VTS++AETT+LW+P Sbjct: 279 RITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHMEHISAYGEGNERRLTGKHETASIDQFSWGVANRGCSIRVGRDTEKKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEP 412
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.276e-59 Identity = 107/134 (79.85%), Postives = 117/134 (87.31%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR DGG +VIKKAI L RH HI AYGEGNERRLTG+HETA INTFSWGVANRG SIRVGRDTEK GKGY EDRRPASNMDPYVVT+++AE+T+LW+P Sbjct: 279 RITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKVHIEAYGEGNERRLTGKHETASINTFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEP 412
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.070e-59 Identity = 106/134 (79.10%), Postives = 118/134 (88.06%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITE AGVVL+ DPKPI GDWNGAG H NYSTKSMR +GG +VIKKAI L RH EHI+AYGEGNERRLTG+HETA I++FSWGVA+RG SIRVGRDTEKEGKGY EDRRPASNMDPYVVT ++AETT+LW+P Sbjct: 283 RITEQAGVVLTLDPKPIDGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVADRGCSIRVGRDTEKEGKGYLEDRRPASNMDPYVVTGLLAETTLLWEP 416
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 8.648e-59 Identity = 105/134 (78.36%), Postives = 118/134 (88.06%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR +GG +VIKKAI L RH EHI+AYGEGNERRLTG+HETA I+ FSWGVANRG SIRVGRDTE +GKGY EDRRPASNMDPY+VTS++AETT+LW+P Sbjct: 281 RITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDQFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYIVTSLLAETTLLWEP 414
BLAST of CN189212 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.475e-58 Identity = 106/134 (79.10%), Postives = 116/134 (86.57%), Query Frame = -3 Query: 222 RITEIAGVVLSFDPKPIKGDWNGAGAHANYSTKSMRNDGGIDVIKKAIEKLGKRHGEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 623 RITE AGVVL+ DPKPI+GDWNGAG H NYSTKSMR DGG +VIKKAI L RH HI AYGEGNERRLTG+HETA IN FSWGVANRG SIRVGRDTEK GKGY EDRRPASNMDPYVVT+++AE+T+LW+P Sbjct: 281 RITEQAGVVLTLDPKPIEGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHKIHIEAYGEGNERRLTGKHETASINDFSWGVANRGCSIRVGRDTEKNGKGYLEDRRPASNMDPYVVTALLAESTLLWEP 414 The following BLAST results are available for this feature:
BLAST of CN189212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189212 ID=CN189212; Name=CN189212; organism=Citrus sinensis; type=EST; length=625bpback to top |