CN189211

Overview
NameCN189211
Unique NameCN189211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_BACAC (Phosphoglycerate kinase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27
Identity = 57/111 (51.35%), Postives = 80/111 (72.07%), Query Frame = -2
Query:  324 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 656
            +IP  W G+D+G    + +++ +  +K ++WNG MGVFE   FA G++A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK L GV+  +D
Sbjct:  285 SIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_BACAA (Phosphoglycerate kinase OS=Bacillus anthracis (strain A0248) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27
Identity = 57/111 (51.35%), Postives = 80/111 (72.07%), Query Frame = -2
Query:  324 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 656
            +IP  W G+D+G    + +++ +  +K ++WNG MGVFE   FA G++A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK L GV+  +D
Sbjct:  285 SIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_YEAST (Phosphoglycerate kinase OS=Saccharomyces cerevisiae GN=PGK1 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = -2
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            IP GW GLD G ++ K F+  +   KTI+WNG  GVFE+ KFAAG++A+  ++ + S  G T IIGGGD+    +K G+ DK+SH+STGGGASLELLEGK L GV
Sbjct:  305 IPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGV 409          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PROA2 (Phosphoglycerate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27
Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = -2
Query:  324 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 656
            +IP+  MGLD+G   I ++S  +   +TI+WNG MGVFE   FA G+ AIA  LA+ + KG  +IIGGGDS AAV K GL   ++HISTGGGASLE LEGK L G+ A +D
Sbjct:  287 SIPETMMGLDIGPKTIDTYSREILKARTIVWNGPMGVFEIDAFATGTIAIAHALADATAKGAISIIGGGDSAAAVMKAGLESGITHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_MYCPA (Phosphoglycerate kinase OS=Mycobacterium paratuberculosis GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = -2
Query:  339 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLHGV 662
            A AIPD  MGLD+G  ++K F+  L   +TI WNG MGVFE+  FAAG++ +A+ +A  +GKG  +++GGGDS AAV  +G+ +   SHISTGGGASLE LEGK L G+
Sbjct:  294 ADAIPDDLMGLDIGPGSVKRFTALLSNAETIFWNGPMGVFEFPAFAAGTKGLAEAIAAATGKGAFSVVGGGDSAAAVRALGIPESGFSHISTGGGASLEYLEGKALPGI 402          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_MYCA1 (Phosphoglycerate kinase OS=Mycobacterium avium (strain 104) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = -2
Query:  339 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLHGV 662
            A AIPD  MGLD+G  ++K F+  L   +TI WNG MGVFE+  FAAG++ +A+ +A  +GKG  +++GGGDS AAV  +G+ +   SHISTGGGASLE LEGK L G+
Sbjct:  294 ADAIPDDLMGLDIGPGSVKRFTALLSNAETIFWNGPMGVFEFPAFAAGTKGLAEAIAAATGKGAFSVVGGGDSAAAVRALGIPESGFSHISTGGGASLEYLEGKALPGI 402          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27
Identity = 61/110 (55.45%), Postives = 78/110 (70.91%), Query Frame = -2
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            IP  W GLD+G    + + + +  +K +IWNG MGVFE   FA G++A+A+ LA+   K   T+IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK L GV+A +D
Sbjct:  286 IPSDWEGLDIGPKTRELYRDVILKSKLVIWNGPMGVFEMDAFAEGTKAVAQALAD--AKDTYTVIGGGDSAAAVEKFGLANKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK1_PIG (Phosphoglycerate kinase 1 OS=Sus scrofa GN=PGK1 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27
Identity = 58/113 (51.33%), Postives = 78/113 (69.03%), Query Frame = -2
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 662
            A+ IP GWMGLD G ++ K +SEA+   K I+WNG +GVFE+  FA G++A+  ++ + + +G  TIIGGGD+     K    DK+SH+STGGGASLELLEGK L GV A  +
Sbjct:  304 ASGIPAGWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_GEOKA (Phosphoglycerate kinase OS=Geobacillus kaustophilus GN=pgk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.395e-27
Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = -2
Query:  324 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 656
            AIP  W  LD+G    + + + +  +K ++WNG MGVFE   FA G++AIA+ LAE       ++IGGGDS AAVEK GLADKM HISTGGGASLE +EGK L GV+A +D
Sbjct:  285 AIPSDWEALDIGPKTRELYRDVIRQSKLVVWNGPMGVFEMEAFAHGTKAIAEALAE--APDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALED 393          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CHLPD (Phosphoglycerate kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.395e-27
Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = -2
Query:  324 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 656
            ++ DG +G+D+G   I+ +   +   +T++WNG MGVFE   FA G+ AIAK LAE +  G  TI+GGGDS AA+ K  L+D ++HISTGGGASLE LEGK L G+ A +D
Sbjct:  287 SMSDGMIGVDIGPKTIEKYRNEILAARTVLWNGPMGVFEIDNFAEGTFAIAKALAEATSSGAITIVGGGDSAAAIAKAALSDSITHISTGGGASLEFLEGKALPGIEALND 397          
The following BLAST results are available for this feature:
BLAST of CN189211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACAC2.577e-2751.35Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_BACAA2.577e-2751.35Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_YEAST3.365e-2755.24Phosphoglycerate kinase OS=Saccharomyces cerevisia... [more]
PGK_PROA23.365e-2754.95Phosphoglycerate kinase OS=Prosthecochloris aestua... [more]
PGK_MYCPA3.365e-2754.13Phosphoglycerate kinase OS=Mycobacterium paratuber... [more]
PGK_MYCA13.365e-2754.13Phosphoglycerate kinase OS=Mycobacterium avium (st... [more]
PGK_ANOFW3.365e-2755.45Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK1_PIG3.365e-2751.33Phosphoglycerate kinase 1 OS=Sus scrofa GN=PGK1 PE... [more]
PGK_GEOKA4.395e-2754.95Phosphoglycerate kinase OS=Geobacillus kaustophilu... [more]
PGK_CHLPD4.395e-2751.35Phosphoglycerate kinase OS=Chlorobium phaeobactero... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189211 ID=CN189211; Name=CN189211; organism=Citrus sinensis; type=EST; length=663bp
GCGGATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTCCCAATCAT
CAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCTTGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAAAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTCATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCTCACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAAGAACTGGGTTTAAGCATCATCAAAAGCAAGCACACCATGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCTACTGAATCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCACTGCCAGCAGCAAATTTATGATATTCAAACACAC
CCATACGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCACGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCT
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