CN189211

Overview
NameCN189211
Unique NameCN189211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_ASPOR (Phosphoglycerate kinase OS=Aspergillus oryzae GN=pgkA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.496e-22
Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = -2
Query:  339 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 662
            A  IPDG+MGLDVG  +++ + + +   KTI+WNG  GVFE   FA  ++         +  G   IIGGGD+     K G   K+SH+STGGGASLELLEGK L GV
Sbjct:  304 ADGIPDGYMGLDVGEKSVELYKKTIAEAKTILWNGPPGVFELEPFANATKKTLDAAVAAAQSGSIVIIGGGDTATVAAKYGAEAKLSHVSTGGGASLELLEGKVLPGV 411          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_TOLAT (Phosphoglycerate kinase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=pgk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22
Identity = 52/110 (47.27%), Postives = 76/110 (69.09%), Query Frame = -2
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            + D  M  D+G D+ K+ ++ +   KTI+WNG +GVFE+ +FA G+E IAK +AE       +I GGGD++AA++K G+ADK+S+ISTGGGA LE +EGK L  V   ++
Sbjct:  277 VTDDDMIFDIGPDSAKALADIIMNAKTILWNGPVGVFEFDQFAKGTEIIAKAIAE---SPAFSIAGGGDTLAAIDKFGIADKVSYISTGGGAFLEFVEGKVLPAVAILEE 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SALTO (Phosphoglycerate kinase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=pgk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = -2
Query:  327 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLHGVLAFD 662
            A  IP   +GLD+G + +  F+ AL   +TI WNG MGVFE   FA G+  +A+ +A        T++GGGDS AAV  +GL ++  SHISTGGGASLE LEGKTL G+ A +
Sbjct:  289 ADGIPSKRVGLDIGPETVAGFAAALRGARTIFWNGPMGVFEMAAFAHGTRGVAEAIAT---SDAFTVVGGGDSAAAVRALGLDEQAFSHISTGGGASLEYLEGKTLPGIAALE 398          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_LACLA (Phosphoglycerate kinase OS=Lactococcus lactis subsp. lactis GN=pgk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.259e-22
Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = -2
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            IP G+MGLDV    I  ++  L+  KT++WNG +GVFE   F AG+  + + + +  G  V +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK L G+ A  +
Sbjct:  290 IPAGFMGLDVASKTIADYNTQLEGAKTVVWNGPVGVFENTDFQAGTVGLMEAIVKQPG--VKSIIGGGDSAAAAINLGYADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_ARTCA (Phosphoglycerate kinase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=pgk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.257e-22
Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = -2
Query:  327 MGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLA-DKMSHISTGGGASLELLEGKTLHGVLAFD 638
            +GLD+G D+  +F++ +   +T+ WNG MGVFE+  F+AG+ AIA+ L E       T++GGGDS AAV  +G A D+  HISTGGGASLE LEGK L G+   D
Sbjct:  306 IGLDIGPDSAAAFADRIKGARTVFWNGPMGVFEFEAFSAGTRAIAQALTETE---AFTVVGGGDSAAAVRTLGFADDQFGHISTGGGASLEYLEGKELPGLSILD 407          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_SALAI (Phosphoglycerate kinase OS=Salinispora arenicola (strain CNS-205) GN=pgk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.560e-22
Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = -2
Query:  324 ATAIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLHGVLAFDD 662
            A  IP   +GLD+G + +  F+ AL   +TI WNG MGVFE   FA G+  +A+ +A        T++GGGDS AAV  +GL ++  SHISTGGGASLE LEGKTL G+ A ++
Sbjct:  289 ADGIPSKRVGLDIGPETVAGFAAALRGARTIFWNGPMGVFEMAAFAHGTCGVAEAIANAD---AFTVVGGGDSAAAVRALGLDEQAFSHISTGGGASLEYLEGKTLPGIAALEN 399          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_LACLM (Phosphoglycerate kinase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=pgk PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22
Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = -2
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            IP G+MGLDV    I  ++  L+  KT++WNG +GVFE   F AG+  + + + +  G  V +IIGGGDS AA   +G A+K S ISTGGGAS+ELLEGK L G+ A  +
Sbjct:  290 IPAGFMGLDVANKTIADYNTQLEGAKTVVWNGPVGVFENPDFQAGTVGLMEAIVKQPG--VKSIIGGGDSAAAAINLGYAEKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_GEOMG (Phosphoglycerate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pgk PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22
Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = -2
Query:  324 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 653
            IP+ WM LD+G   +  F+EAL   KTIIWNG MGVFE   F+ G+ A+   +A        TI+GGGD+ +AV + G   K+S+ISTGGGA LELLEGK L G+   ++
Sbjct:  289 IPEEWMALDIGPATVTLFTEALQNAKTIIWNGPMGVFEMDAFSRGTFAMVSAVA---NSYALTIVGGGDTDSAVHRAGEYAKISYISTGGGAFLELLEGKHLPGIKVLEE 395          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_DROME (Phosphoglycerate kinase OS=Drosophila melanogaster GN=Pgk PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22
Identity = 54/111 (48.65%), Postives = 69/111 (62.16%), Query Frame = -2
Query:  321 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDDA 653
            IPDG MGLDVG    + F+  +   K I+WNG  GVFE+  FA G+++I   +   +  G  +IIGGGD+ +   K      +SH+STGGGASLELLEGKTL GV A   A
Sbjct:  305 IPDGHMGLDVGPKTRELFAAPIARAKLIVWNGPPGVFEFPNFANGTKSIMDGVVAATKNGTVSIIGGGDTASCCAKWNTEALVSHVSTGGGASLELLEGKTLPGVAALTSA 415          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_ACIAD (Phosphoglycerate kinase OS=Acinetobacter sp. (strain ADP1) GN=pgk PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.261e-22
Identity = 54/105 (51.43%), Postives = 73/105 (69.52%), Query Frame = -2
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            I D  M LDVG D  K+F+E L T KTI+WNG +GVFE  +F  G++ ++  +AE  G    +I GGGD++AA++K  +ADK+ +ISTGGGA LE +EGKTL  V
Sbjct:  287 IADNDMILDVGPDTAKAFAEILKTAKTILWNGPVGVFEVDQFGEGTKTLSLAIAESKG---FSIAGGGDTLAAIDKYKVADKIGYISTGGGAFLEFVEGKTLPAV 388          
The following BLAST results are available for this feature:
BLAST of CN189211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ASPOR2.496e-2248.15Phosphoglycerate kinase OS=Aspergillus oryzae GN=p... [more]
PGK_TOLAT3.259e-2247.27Phosphoglycerate kinase OS=Tolumonas auensis (stra... [more]
PGK_SALTO3.259e-2249.56Phosphoglycerate kinase OS=Salinispora tropica (st... [more]
PGK_LACLA3.259e-2250.00Phosphoglycerate kinase OS=Lactococcus lactis subs... [more]
PGK_ARTCA4.257e-2250.48Phosphoglycerate kinase OS=Arthrobacter chlorophen... [more]
PGK_SALAI5.560e-2249.12Phosphoglycerate kinase OS=Salinispora arenicola (... [more]
PGK_LACLM7.261e-2249.09Phosphoglycerate kinase OS=Lactococcus lactis subs... [more]
PGK_GEOMG7.261e-2249.09Phosphoglycerate kinase OS=Geobacter metallireduce... [more]
PGK_DROME7.261e-2248.65Phosphoglycerate kinase OS=Drosophila melanogaster... [more]
PGK_ACIAD7.261e-2251.43Phosphoglycerate kinase OS=Acinetobacter sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189211 ID=CN189211; Name=CN189211; organism=Citrus sinensis; type=EST; length=663bp
GCGGATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTCCCAATCAT
CAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCTTGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAAAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTCATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCTCACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAAGAACTGGGTTTAAGCATCATCAAAAGCAAGCACACCATGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCTACTGAATCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCACTGCCAGCAGCAAATTTATGATATTCAAACACAC
CCATACGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCACGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCT
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