CN189211

Overview
NameCN189211
Unique NameCN189211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_WOLPM (Phosphoglycerate kinase OS=Wolbachia pipientis wMel GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 49/110 (44.55%), Postives = 78/110 (70.91%), Query Frame = -2
Query:  333 AIPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLHGVLA 656
            +I DG + LD+G   + + S  + ++KT++WNG +GVFE+  FA+G+  + K +++L+ KG +T+IIGGGDS++A+   GLADK  +++STGGGA L+ L G  + GV A
Sbjct:  283 SILDGDIILDIGPQTLSTISSIIASSKTLLWNGPIGVFEHSAFASGTIGVMKIVSDLTHKGKLTSIIGGGDSLSAISAAGLADKDFTYVSTGGGAFLDWLSGDEMPGVAA 392          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_VESOH (Phosphoglycerate kinase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = -2
Query:  339 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 653
            + D  M  D+G  + +  ++ +    TI+WNG +GVFE+ +FA G+E + K +AE       +I GGGD++AAV+K G+ DK+S+ISTGGGA LE LEGK L  V
Sbjct:  277 VADDDMIFDIGPKSAQQLADIMRNAGTIVWNGPVGVFEFDQFAGGTETLGKAIAE---SNAFSIAGGGDTLAAVDKYGIEDKISYISTGGGAFLEFLEGKKLPAV 378          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEPK (Phosphoglycerate kinase OS=Pseudomonas putida (strain KT2440) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 46/105 (43.81%), Postives = 73/105 (69.52%), Query Frame = -2
Query:  324 MGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 638
            M LD+G     +F+E L ++KTI+WNG +GVFE+ +F  G++ +AK +A+       +I GGGD++AA++K G++ ++S+ISTGGGA LE +EGK L  V   ++
Sbjct:  282 MILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGNGTKVLAKAIAD---SAAFSIAGGGDTLAAIDKYGVSKEISYISTGGGAFLEFVEGKVLPAVAILEE 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEPG (Phosphoglycerate kinase OS=Pseudomonas putida (strain GB-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 46/105 (43.81%), Postives = 73/105 (69.52%), Query Frame = -2
Query:  324 MGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 638
            M LD+G     +F+E L ++KTI+WNG +GVFE+ +F  G++ +AK +A+       +I GGGD++AA++K G++ ++S+ISTGGGA LE +EGK L  V   ++
Sbjct:  282 MILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGNGTKVLAKAIAD---SAAFSIAGGGDTLAAIDKYGVSKEISYISTGGGAFLEFVEGKVLPAVAILEE 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEP1 (Phosphoglycerate kinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 46/105 (43.81%), Postives = 73/105 (69.52%), Query Frame = -2
Query:  324 MGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 638
            M LD+G     +F+E L ++KTI+WNG +GVFE+ +F  G++ +AK +A+       +I GGGD++AA++K G++ ++S+ISTGGGA LE +EGK L  V   ++
Sbjct:  282 MILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGNGTKVLAKAIAD---SAAFSIAGGGDTLAAIDKYGVSKEISYISTGGGAFLEFVEGKVLPAVAILEE 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_PSEE4 (Phosphoglycerate kinase OS=Pseudomonas entomophila (strain L48) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 47/105 (44.76%), Postives = 71/105 (67.62%), Query Frame = -2
Query:  324 MGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGVLAFDD 638
            M LD+G    + F+E L T+KTI+WNG +GVFE+ +F  G++ +AK +A+       +I GGGD++AA++K G+   +S+ISTGGGA LE +EGK L  V   ++
Sbjct:  282 MILDIGPKTAEQFAELLKTSKTILWNGPVGVFEFDQFGNGTKVLAKAIAD---SAAFSIAGGGDTLAAIDKYGVGADISYISTGGGAFLEFVEGKVLPAVAILEE 383          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_MYCPE (Phosphoglycerate kinase OS=Mycoplasma penetrans GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = -2
Query:  339 PDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 650
            P    G DVG+  IK F + L   +T+IWNG +GVFE   F  G+  + K +A+++ K G  ++IGGGDS AA  K G+    SHISTGGGASLE   G  L GV
Sbjct:  302 PADLAGFDVGKKTIKLFKKELKLAETVIWNGPLGVFENDAFNKGTLKVCKYIAKITAKKGCYSVIGGGDSAAAAAKCGVTHSFSHISTGGGASLEFFSGVELPGV 406          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_HAES2 (Phosphoglycerate kinase OS=Haemophilus somnus (strain 2336) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = -2
Query:  339 DVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHGV 629
            D+G  + +  ++ +   KTI+WNG +GVFE+  F  G+E ++  +AE +  G  +I GGGD++AA++  G+ DK+S+ISTGGGA LE +EGK L  V
Sbjct:  284 DIGDKSAEQLADIIRNAKTILWNGPVGVFEFPNFRKGTEIVSNAIAEATANGAFSIAGGGDTLAAIDLFGIKDKISYISTGGGAFLEFVEGKVLPAV 380          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CHLTB (Phosphoglycerate kinase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = -2
Query:  342 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHG 653
            IP+G  G D+G   I+ FS+ +  + TI WNG +GV+E   F  GS+AIA+ LA  S     T++GGGD+ A V   G   ++SH+STGGGASLE LE  +L G
Sbjct:  293 IPEGLAGFDIGAQTIELFSKVIQESATIFWNGPVGVYEVPPFDQGSKAIAQCLA--SHSSAVTVVGGGDAAAVVALAGCTSQISHVSTGGGASLEFLEKGSLPG 394          
BLAST of CN189211 vs. ExPASy Swiss-Prot
Match: PGK_CHLT2 (Phosphoglycerate kinase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=pgk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.514e-19
Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = -2
Query:  342 IPDGWMGLDVGRDAIKSFSEALDTTKTIIWNGRMGVFEYHKFAAGSEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLHG 653
            IP+G  G D+G   I+ FS+ +  + TI WNG +GV+E   F  GS+AIA+ LA  S     T++GGGD+ A V   G   ++SH+STGGGASLE LE  +L G
Sbjct:  293 IPEGLAGFDIGAQTIELFSKVIQESATIFWNGPVGVYEVPPFDQGSKAIAQCLA--SHSSAVTVVGGGDAAAVVALAGCTSQISHVSTGGGASLEFLEKGSLPG 394          
The following BLAST results are available for this feature:
BLAST of CN189211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_WOLPM1.514e-1944.55Phosphoglycerate kinase OS=Wolbachia pipientis wMe... [more]
PGK_VESOH1.514e-1945.71Phosphoglycerate kinase OS=Vesicomyosocius okutani... [more]
PGK_PSEPK1.514e-1943.81Phosphoglycerate kinase OS=Pseudomonas putida (str... [more]
PGK_PSEPG1.514e-1943.81Phosphoglycerate kinase OS=Pseudomonas putida (str... [more]
PGK_PSEP11.514e-1943.81Phosphoglycerate kinase OS=Pseudomonas putida (str... [more]
PGK_PSEE41.514e-1944.76Phosphoglycerate kinase OS=Pseudomonas entomophila... [more]
PGK_MYCPE1.514e-1947.62Phosphoglycerate kinase OS=Mycoplasma penetrans GN... [more]
PGK_HAES21.514e-1944.33Phosphoglycerate kinase OS=Haemophilus somnus (str... [more]
PGK_CHLTB1.514e-1947.12Phosphoglycerate kinase OS=Chlamydia trachomatis (... [more]
PGK_CHLT21.514e-1947.12Phosphoglycerate kinase OS=Chlamydia trachomatis (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189211 ID=CN189211; Name=CN189211; organism=Citrus sinensis; type=EST; length=663bp
GCGGATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTCCCAATCAT
CAACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCTTGAAACT
TATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAAT
GCATCACCATTGATGCCTGTGAAAAAGAATTTATTTTTACTCTTACAGCA
TCTACAAAACCAACTCTCATGATAAAGTTTAACTTTTATCCACTCTGGGC
TGACAACCAGCCTCACATACAACTCTGGAAATGGCACATTTAAAAAAGGA
AAGTCCAAGAACTGGGTTTAAGCATCATCAAAAGCAAGCACACCATGGAG
TGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATAT
GGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCTACTGAATCA
CCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCAAGCTT
CTTGGCAATTGCCTCACTGCCAGCAGCAAATTTATGATATTCAAACACAC
CCATACGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTTCACTG
AATGACTTGATGGCATCACGTCCAACATCCAAGCCCATCCAACCATCTGG
AATTGCCGTTGCT
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