CN189210

Overview
NameCN189210
Unique NameCN189210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3988 contig Csv1_Contig3988:32..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.742e-31
Identity = 71/106 (66.98%), Postives = 79/106 (74.53%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDSLKPV+LT  +Q    ASF LGW IT GAGLA YPIDTVRRRMMMT GEAVKYKSSL AF +I   EG KSLFKG GANILR         G+D+LQ++FF
Sbjct:  217 FGLYDSLKPVLLTGTLQVCSFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQIPAKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFF 322          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29
Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDSLKP++LT  +++SFLASFLLGW +T GA  A YP+DTVRRRMMMT G+AVKY  +  AF +I+  EG KSLFKG GANILR          +D+LQ++ F
Sbjct:  195 FGLYDSLKPLLLTGSLENSFLASFLLGWAVTTGASTASYPLDTVRRRMMMTSGQAVKYDGAFDAFRKIVAAEGIKSLFKGCGANILRGVAGAGVISMYDQLQVILF 300          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.182e-29
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDS+KPV+L   ++++FLASF LGW +T  AG+A YP+DT+RRRMMMT GEAVKYKSS  A  +I+  EG KSLFKG GANILR          +D+LQ++ F
Sbjct:  199 FGLYDSIKPVLLVGDLKNNFLASFALGWCVTTAAGIASYPLDTIRRRMMMTSGEAVKYKSSFDAASQIVAKEGVKSLFKGAGANILRGVAGAGVLSIYDQLQVLLF 304          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28
Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FGMYD+LKPVVL   ++ +FLASFLLGW +T G+G+A YP+DT+RRRMMMT GEAVKY SS     +IL  EG +S FKG GANILR          +D++QL+ F
Sbjct:  213 FGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGEAVKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLMF 318          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT3_YEAST (ADP,ATP carrier protein 3 OS=Saccharomyces cerevisiae GN=AAC3 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27
Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FGM+DSLKP+VLT  +  SFLASFLLGW +T GA    YP+DTVRRRMMMT G+AVKY  ++    +I+ +EG  SLFKG GANILR          +D+LQ++ F
Sbjct:  197 FGMFDSLKPLVLTGSLDGSFLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILF 302          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 58/106 (54.72%), Postives = 74/106 (69.81%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FG+YDS KPV+LT  ++ SF+ASFLLGW IT+GA  A YP+DTVRRRMMMT G+ +KY  +L    +I++ EG  SLFKG GANI R          +D+LQL+ F
Sbjct:  199 FGLYDSFKPVLLTGALEGSFVASFLLGWVITMGASTASYPLDTVRRRMMMTSGQTIKYDGALDCLRKIVQKEGAYSLFKGCGANIFRGVAAAGVISLYDQLQLIMF 304          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT2_YEAST (ADP,ATP carrier protein 2 OS=Saccharomyces cerevisiae GN=AAC2 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.706e-26
Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = -2
Query:  266 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVFF 583
            FGMYDSLKP++LT  ++ SFLASFLLGW +T GA    YP+DTVRRRMMMT G+AVKY  +     +I+  EG  SLFKG GANILR          +D+LQ++ F
Sbjct:  208 FGMYDSLKPLLLTGSLEGSFLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQMILF 313          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT_CHLKE (ADP,ATP carrier protein OS=Chlorella kessleri PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.825e-13
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = -2
Query:  278 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQ 583
            FG+YD+ K V+  D    +F A + +   +T GAG+  YP DTVRRR+MM  G   +Y  ++  + ++ + EG K+ FKG  +N+LR          +D+++
Sbjct:  225 FGLYDTAKGVLFKDERTANFFAKWAVAQAVTAGAGVLSYPFDTVRRRLMMQSGGERQYNGTIDCWRKVAQQEGMKAFFKGAWSNVLRGAGGAFVLVLYDEIK 326          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT4_MACFA (ADP/ATP translocase 4 OS=Macaca fascicularis GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.220e-13
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = -2
Query:  269 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVK-YKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVF 583
            FG YD++K + L    +  FL SF +   +T  +G+  YP DTVRRRMMM  GEA + YK +L  F +I ++EG  S F+G  +N+LR          +DK++  F
Sbjct:  204 FGAYDTVKGL-LPKPKKTPFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGINSFFRGAFSNVLRGTGGALVLVLYDKIKEFF 308          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT4_HUMAN (ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.220e-13
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = -2
Query:  269 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVK-YKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLVF 583
            FG YD++K + L    +  FL SF +   +T  +G+  YP DTVRRRMMM  GEA + YK +L  F +I ++EG  S F+G  +N+LR          +DK++  F
Sbjct:  204 FGAYDTVKGL-LPKPKKTPFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGEAKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVLVLYDKIKEFF 308          
The following BLAST results are available for this feature:
BLAST of CN189210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ADT2_WHEAT8.742e-3166.98ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]
ADT_KLULA6.265e-2958.49ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
ADT_NEUCR8.182e-2957.55ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
ADT_SCHPO1.069e-2857.55ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT3_YEAST5.864e-2755.66ADP,ATP carrier protein 3 OS=Saccharomyces cerevis... [more]
ADT1_YEAST1.000e-2654.72ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
ADT2_YEAST1.706e-2655.66ADP,ATP carrier protein 2 OS=Saccharomyces cerevis... [more]
ADT_CHLKE2.825e-1334.31ADP,ATP carrier protein OS=Chlorella kessleri PE=3... [more]
ADT4_MACFA8.220e-1339.62ADP/ATP translocase 4 OS=Macaca fascicularis GN=SL... [more]
ADT4_HUMAN8.220e-1339.62ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189210 ID=CN189210; Name=CN189210; organism=Citrus sinensis; type=EST; length=584bp
TTTTTTTTTTTTTTTTTCCAAGGGAAAACTATTTAAATTATTACCCCAAC
CCTTGAGTCTAGGGCCCAAGCACAAAAACACTCAAATTCAAACAGTTCTT
TGACAACAAAAATCTTTTCTTTTATCAAATCCCTAAAAACCGGAAAAATA
TTAATAACCCTATCGATCATCCAAAATTATTCAAACTTGAAAAAAGCCCC
TATAGAATTTTCCCCAACATCTTGTACAAGTATTAACCGCCCCCCCCGGA
TCCGTATTTCTTGCCAAAAAAAACCAGCTGCAGCTTGTCAAAACCGGCAA
GCACACCAGCACCTGCCACAGCACGCAAAATGTTTGCCCCACCCCCTTTG
AAAAGGGATTTAGGGCCTTCATTCTTTAAAATTTCCGGGAAGGCAGGCAA
AGAGCTCTTGTACTTCACAGCTTCTCCAAAGGTCATCATCATCCTTCTAC
GCACCGTATCAATTGGGTAAAAAGCCAAACCAGCCCCAATTGTGATTCCC
CAGCCAAGTAAAAAGCTAGCCAAAAAACTATCCTGCATCCCATCAGTCAA
CACCACAGGTTTTAGAGAATCGTACATTCCAAAG
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