CN189210

Overview
NameCN189210
Unique NameCN189210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3988 contig Csv1_Contig3988:32..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12
Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = -2
Query:  278 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVK-YKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQ 583
            FG YD++K + L    +  FL SF +   +T  +G+  YP DTVRRRMMM  GEA + YK +L  F +I + EG  + F+G  +NILR          +DK++
Sbjct:  208 FGAYDTVKGL-LPKPKETHFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGEAERQYKGTLDCFMKIYQQEGIGAFFRGAFSNILRGTGGALVLVLYDKIK 309          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = -2
Query:  272 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEA---VKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLV 583
            FG+YD+ K + L D      + S+++   +T  AG+  YP DTVRRRMMM  G     + YK ++  + +ILK+EG K+ FKG  +N+LR          +D+L+ V
Sbjct:  192 FGIYDTAKGM-LPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYKGTVDCWRKILKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKV 297          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT4_MOUSE (ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.959e-12
Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = -2
Query:  278 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEAVK-YKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQ 583
            FG YD++K + L    +  FL SF++   +T  +G+  YP DTVRRRMMM  GE+ + YK ++  F +I ++EG  + F+G  +NILR          +DK++
Sbjct:  205 FGAYDTVKGL-LPKPKETPFLVSFIIAQIVTTCSGILSYPFDTVRRRMMMQSGESDRQYKGTIDCFLKIYRHEGVPAFFRGAFSNILRGTGGALVLVLYDKIK 306          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.187e-11
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = -2
Query:  278 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEA---VKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQ 583
            FG+YD+ K + L D      + S+++   +T  AGL  YP DTVRRRMMM  G     + Y  ++  + +I K+EGPK+ FKG  +N+LR          +D+++
Sbjct:  192 FGVYDTAKGM-LPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIK 295          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 5.891e-11
Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = -2
Query:  272 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEA---VKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQLV 583
            FG+Y + K + L D      + S+++   +T  AG+  YP DTVRRRMMM  G     + YK +L  + +I K+EG K+ FKG  +N+LR          +D+L+ V
Sbjct:  192 FGVYGTAKGM-LPDPRNTHIVVSWMIAQTVTAVAGVFSYPFDTVRRRMMMQSGRKGADIMYKGTLDCWRKIFKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKV 297          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11
Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = -2
Query:  278 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEA---VKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQ 583
            FG+YD+ K + L D        S+++   +T  AGL  YP DTVRRRMMM  G     + Y  +L  + +I ++EG K+ FKG  +N+LR          +D+++
Sbjct:  192 FGIYDTAKGM-LPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGSKAFFKGAWSNVLRGMGGAFVLVLYDEIK 295          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11
Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = -2
Query:  278 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEA---VKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQ 583
            FG+YD+ K + L D        S+++   +T  AGL  YP DTVRRRMMM  G     + Y  +L  + +I ++EG K+ FKG  +N+LR          +D+++
Sbjct:  192 FGIYDTAKGM-LPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIK 295          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_RAT (ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11
Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = -2
Query:  278 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEA---VKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQ 583
            FG+YD+ K + L D      + S+++   +T  AGL  YP DTVRRRMMM  G     + Y  ++  + +I K+EG K+ FKG  +N+LR          +D+++
Sbjct:  192 FGVYDTAKGM-LPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGRKAFFKGAWSNVLRGMGGAFVLVLYDEIK 295          
BLAST of CN189210 vs. ExPASy Swiss-Prot
Match: ADT1_RABIT (ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=SLC25A4 PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11
Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = -2
Query:  278 FGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLAFYPIDTVRRRMMMTFGEA---VKYKSSLPAFPEILKNEGPKSLFKGGGANILRXXXXXXXXXGFDKLQ 583
            FG+YD+ K + L D      + S+++   +T  AGL  YP DTVRRRMMM  G     + Y  ++  + +I K+EG K+ FKG  +N+LR          +D+++
Sbjct:  192 FGVYDTAKGM-LPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWKKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIK 295          
The following BLAST results are available for this feature:
BLAST of CN189210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ADT4_BOVIN4.080e-1239.81ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]
ADT3_BOVIN4.080e-1237.38ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT4_MOUSE6.959e-1237.86ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 ... [more]
ADT1_BOVIN1.187e-1136.19ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
ADT3_PIG5.891e-1136.45ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT2_MOUSE7.694e-1135.24ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT2_BOVIN7.694e-1135.24ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
ADT1_RAT7.694e-1135.24ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc2... [more]
ADT1_RABIT7.694e-1135.24ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H22_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189210 ID=CN189210; Name=CN189210; organism=Citrus sinensis; type=EST; length=584bp
TTTTTTTTTTTTTTTTTCCAAGGGAAAACTATTTAAATTATTACCCCAAC
CCTTGAGTCTAGGGCCCAAGCACAAAAACACTCAAATTCAAACAGTTCTT
TGACAACAAAAATCTTTTCTTTTATCAAATCCCTAAAAACCGGAAAAATA
TTAATAACCCTATCGATCATCCAAAATTATTCAAACTTGAAAAAAGCCCC
TATAGAATTTTCCCCAACATCTTGTACAAGTATTAACCGCCCCCCCCGGA
TCCGTATTTCTTGCCAAAAAAAACCAGCTGCAGCTTGTCAAAACCGGCAA
GCACACCAGCACCTGCCACAGCACGCAAAATGTTTGCCCCACCCCCTTTG
AAAAGGGATTTAGGGCCTTCATTCTTTAAAATTTCCGGGAAGGCAGGCAA
AGAGCTCTTGTACTTCACAGCTTCTCCAAAGGTCATCATCATCCTTCTAC
GCACCGTATCAATTGGGTAAAAAGCCAAACCAGCCCCAATTGTGATTCCC
CAGCCAAGTAAAAAGCTAGCCAAAAAACTATCCTGCATCCCATCAGTCAA
CACCACAGGTTTTAGAGAATCGTACATTCCAAAG
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