CN189198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189198 vs. ExPASy Swiss-Prot
Match: RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.739e-11 Identity = 33/94 (35.11%), Postives = 49/94 (52.13%), Query Frame = -3 Query: 264 LPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 545 LP ++ + K++ YL+ GW P +E H P + YW MWKLPM+G TD ++L E K P++ VR++G+DN Q Q Sbjct: 25 LPAMNAADIRKQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of CN189198 vs. ExPASy Swiss-Prot
Match: RBS_RHOCA (Ribulose bisphosphate carboxylase small chain OS=Rhodobacter capsulatus GN=cbbS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.874e-11 Identity = 33/106 (31.13%), Postives = 54/106 (50.94%), Query Frame = -3 Query: 228 LPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPGV 545 LPP+ + + +++ +++++GW P +E H P + YW MWKLPM+G TD +L E+ + P VR+IG+DN Q Q + I + V Sbjct: 25 LPPMGEAEIRRQVEWIVKNGWNPGIE------------HTEPDFAAQIYWYMWKLPMFGETDVDAILAELKACHEANPGHHVRLIGYDNFTQSQGANMIVYRGTAV 118
BLAST of CN189198 vs. ExPASy Swiss-Prot
Match: RBS_GUITH (Ribulose bisphosphate carboxylase small chain OS=Guillardia theta GN=rbcS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.631e-11 Identity = 35/105 (33.33%), Postives = 54/105 (51.43%), Query Frame = -3 Query: 237 LPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ--CISFIAAKP 545 LP L+DE ++K+I Y I W +E W H ++ YW +W LP++G D V+ E+ +K P +V++ FDN R V+ C+SFI +P Sbjct: 11 LPDLTDEQIVKQIQYAISKNWALNVE------WTDDPHPRNA------YWDLWGLPLFGIKDPAAVMFEINACRKAKPACYVKVNAFDNSRGVESCCLSFIVQRP 103 The following BLAST results are available for this feature:
BLAST of CN189198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189198 ID=CN189198; Name=CN189198; organism=Citrus sinensis; type=EST; length=547bpback to top |