CN189189

Overview
NameCN189189
Unique NameCN189189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:136..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: PRDX5_PAPHA (Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.609e-21
Identity = 60/140 (42.86%), Postives = 81/140 (57.86%), Query Frame = -3
Query:  189 QVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 599
            +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   76 KVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKVEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: PRDX5_RAT (Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus GN=Prdx5 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20
Identity = 59/141 (41.84%), Postives = 80/141 (56.74%), Query Frame = -3
Query:  189 QQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 602
            ++V++  L   KK +LFGVPGAFTP CS  H+PGF+E+A  LK+K    + C+SVND FV   W +       V+ LAD +  +     L LD S   L    R +RF++++D   VKA NVE  G   T S A +IL  L
Sbjct:   73 KKVNLAELFKDKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDAFVTAEWGRAHQAEGKVQLLADPTGAFGKETDLLLDDSLVSLFGNRRLKRFSMVIDKGVVKALNVEPDGTGLTCSLAPNILSQL 213          
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: YRP2_RHIET (Putative peroxiredoxin in rpoN2 3'region OS=Rhizobium etli PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.761e-20
Identity = 57/136 (41.91%), Postives = 80/136 (58.82%), Query Frame = -3
Query:  189 AGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GD------FTVSSADDILKAL 575
            +GK+VILF +PGAFTP CS   +P F     E K   +D+I C+SVND FVM AW K+    K+VK + DGS ++T  +G+ +     G G RS R+A ++++  V+    E G GD      + VSS  +ILK L
Sbjct:   39 SGKRVILFSLPGAFTPICSTFQLPDFESLYVEFKKNGIDDIYCLSVNDAFVMNAWGKS-QGLKNVKLIPDGSGEFTRKMGMLVAKDNLGFGLRSWRYAAVINNGVVEGWFEEEGFGDNCATDPYGVSSPQNILKCL 173          
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: PMP20_EMENI (Putative peroxiredoxin pmp20 OS=Emericella nidulans GN=AN8692 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.569e-19
Identity = 54/131 (41.22%), Postives = 83/131 (63.36%), Query Frame = -3
Query:  189 AGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAK-TFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 575
            A KKVILF +PGAFTP CS +HVP +IE+  E+++K VD +  ++ ND FVM AW K    +N  + FL+D  AK++ ++G      E+G   R++R+A+++D  KV  A +E +      SSA+ ++K L
Sbjct:   44 ADKKVILFALPGAFTPVCSARHVPEYIERLPEIRAKGVDVVAVLAYNDAFVMSAWGKANGVKNDDILFLSDPEAKFSKSIGW---ADEEG---RTKRYAIVLDHGKVTYAALEPAKNHLEFSSAETVIKHL 168          
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: Y4VD_RHISN (Putative peroxiredoxin y4vD OS=Rhizobium sp. (strain NGR234) GN=NGR_a01200 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.382e-19
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = -3
Query:  189 AGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-------GDFTVSSADDILKAL 575
            +GK+V+LF +PGAFTPTCS + +P F    DE     ++ + C+SVND FVM AW K     K V+ + DGS ++T  +G+ +     G G RS R+A +V+D  V+    E G         +  SS  +IL+ L
Sbjct:   39 SGKRVVLFSLPGAFTPTCSTQQLPDFERLYDEFGKVGIEAVYCLSVNDAFVMNAWGKALGLEK-VRLIPDGSGEFTRKMGMLVAKDNLGFGMRSWRYAAVVNDSVVEQWFEEEGFSDNCESDPYWASSPQNILETL 173          
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: PMP20_ASPFU (Putative peroxiredoxin pmp20 OS=Aspergillus fumigatus GN=pmp20 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.762e-19
Identity = 53/131 (40.46%), Postives = 81/131 (61.83%), Query Frame = -3
Query:  189 AGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFP-ENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 575
            A KKVILF +PGAFTP CS +HVP +IEK  E+++K VD +  ++ ND +VM AW K        + FL+D  A+++ ++G      E+G   R++R+AL++D  K+  A +E +      SSA+ +LK L
Sbjct:   44 ADKKVILFALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGKANQVTGDDILFLSDPDARFSKSIGW---ADEEG---RTKRYALVIDHGKITYAALEPAKNHLEFSSAETVLKHL 168          
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: PMP20_LIPKO (Putative peroxisomal peroxiredoxin OS=Lipomyces kononenkoae PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.175e-18
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = -3
Query:  189 KKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTF-PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 569
            K V++  +PGAFTPTC+  H+P F+EK   LKS  VD ++ +S NDPFV  A+ K     +++  F +D  A+++ + GL LDL     GTR+ R+A++V +  VK    +S G    S  D +L AL
Sbjct:   41 KTVVIVAIPGAFTPTCTANHIPPFVEKFTALKSAGVDAVIVLSANDPFVQSAFGKALGVTDEAFIFASDPGAEFSKSAGLSLDL-PPAFGTRTARYAIIVSNGVVKYVEKDSEG-VAGSGVDAVLAAL 166          
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: AHP1_YEAST (Peroxiredoxin type-2 OS=Saccharomyces cerevisiae GN=AHP1 PE=1 SV=4)

HSP 1 Score: 91.6633 bits (226), Expect = 3.710e-18
Identity = 49/136 (36.03%), Postives = 83/136 (61.03%), Query Frame = -3
Query:  189 LAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADEL-KSKDVDEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDD--LKVKAANVESGGDFTVSSADDILKAL 581
            ++  KKVI+ G P AF+PTC++ H+PG+I   DEL K K+VD+++ ++V++PF  +AWAK+    +   +KF +D    +T ++G EL + +      S R+A++V++  +   A     G D TVSS + +L  L
Sbjct:   43 ISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVGDGVYW--SGRWAMVVENGIVTYAAKETNPGTDVTVSSVESVLAHL 176          
BLAST of CN189189 vs. ExPASy Swiss-Prot
Match: PMP20_SCHPO (Putative peroxiredoxin pmp20 OS=Schizosaccharomyces pombe GN=pmp20 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.559e-16
Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = -3
Query:  189 KVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFP--ENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GDFTVSSADDILKAL 566
            K I+ GVPGAFTP CS   VPG+I    +  +K +  I  ++VND FV KAW K+F   E   V F+AD + ++T A     D S      RS+R+A +V++ KV    +E+   D  +SSAD +L +L
Sbjct:   29 KFIIVGVPGAFTPPCS-SQVPGYIANEKQFAAKGISGIYVVAVNDVFVTKAWKKSFDGGEQSGVHFVADWNGEFTKAFDAGFDASGLLGPLRSKRYAAVVENGKVVKVFIENEVTDVDISSADKVLSSL 156          
The following BLAST results are available for this feature:
BLAST of CN189189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRDX5_PAPHA1.609e-2142.86Peroxiredoxin-5, mitochondrial OS=Papio hamadryas ... [more]
PRDX5_RAT1.043e-2041.84Peroxiredoxin-5, mitochondrial OS=Rattus norvegicu... [more]
YRP2_RHIET6.761e-2041.91Putative peroxiredoxin in rpoN2 3'region OS=Rhizob... [more]
PMP20_EMENI2.569e-1941.22Putative peroxiredoxin pmp20 OS=Emericella nidulan... [more]
Y4VD_RHISN4.382e-1938.24Putative peroxiredoxin y4vD OS=Rhizobium sp. (stra... [more]
PMP20_ASPFU9.762e-1940.46Putative peroxiredoxin pmp20 OS=Aspergillus fumiga... [more]
PMP20_LIPKO2.175e-1839.84Putative peroxisomal peroxiredoxin OS=Lipomyces ko... [more]
AHP1_YEAST3.710e-1836.03Peroxiredoxin type-2 OS=Saccharomyces cerevisiae G... [more]
PMP20_SCHPO1.559e-1640.31Putative peroxiredoxin pmp20 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189189 ID=CN189189; Name=CN189189; organism=Citrus sinensis; type=EST; length=658bp
GCAGGTTTTTACACAAAAACACACCCTTTATTCCGATAAAGATCAACAAC
AGTTTAAACAAAAGACTTCTCGCGTCATACATAACAATATTCGAGATCCA
CTGGTTTATATTCATCCTAAGCATAGCACAGCAAAAGGAAGTAATAACTC
AACCAACACTAAGCAGCTGGGATGGAACTGCAAATTTAAAGAGCCTTGAG
GATGTCATCAGCACTGGAGACTGTGAAATCTCCACCAGATTCAACATTTG
CGGCCTTCACCTTGAGGTCATCAACCAAGAGAGCAAACCTCCTTGACCGG
GTGCCAAGTCCTTTCTCACTGAGGTCAAGCTCAAGCCCCAAAGCATGGGT
GTATTTTGCTGAGCCATCAGCCAGGAACTTCACGCTCTTGTTCTCAGGAA
ATGTTTTGGCCCATGCCTTCATCACAAATGGGTCATTAACGCTTATGCAG
AGAATTTCATCGACGTCTTTTGACTTCAACTCATCAGCCTTCTCGATGAA
TCCAGGCACATGCTTCAAGCTGCAAGTAGGAGTGAAAGCACCGGGGACGC
CAAAGAGGATGACCTTTTTACCGGCAGCGAGCGAGTGTACGGACACTTGC
TGCAACTGATCTTGTTCGTCGAAGTAAGCGAGAATACCGTCCGGCAAGGG
GTCACCGA
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