CN189180 | Citrus Genome Database

Overview


Name	CN189180
Unique Name	CN189180
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	630

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Rind cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ENTS8 (Enolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 117/201 (58.21%), Postives = 135/201 (67.16%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV  VN  I  A+ GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGASS KEA++MG EV+HHL  V+K
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAIVGKDAKDQAGIDKIMID-LDGTEN-----KSNFGANAILAVSLANAKAAAASKGMPLYEHIAELNGTPGKFSMPVPMMNIINGGEHADNNVDIQEFMIQPVGASSVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOUT (Enolase OS=Escherichia coli (strain UTI89 / UPEC) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOSM (Enolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOSE (Enolase OS=Escherichia coli (strain SE11) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOLU (Enolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOLI (Enolase OS=Escherichia coli (strain K12) GN=eno PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOLC (Enolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOL6 (Enolase OS=Escherichia coli O6 GN=eno PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOL5 (Enolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

[Close]

BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ECOK1 (Enolase OS=Escherichia coli O1:K1 / APEC GN=eno PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.005e-52
Identity = 116/201 (57.71%), Postives = 136/201 (67.66%), Query Frame = 2

Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV+KAV+ VN  I  AL GKD  +Q  ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY+HIAEL+G      +PVP  N+INGG HA N + +QEFMI PVGA + KEA++MG EV+HHL  V+K
Sbjct:    4 IVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMID-LDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLK 198

The following BLAST results are available for this feature:

BLAST of CN189180 vs. ExPASy Swiss-Prot

BLAST of CN189180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_ENTS8	8.005e-52	58.21	Enolase OS=Enterobacter sakazakii (strain ATCC BAA...	[more]
ENO_ECOUT	8.005e-52	57.71	Enolase OS=Escherichia coli (strain UTI89 / UPEC) ...	[more]
ENO_ECOSM	8.005e-52	57.71	Enolase OS=Escherichia coli (strain SMS-3-5 / SECE...	[more]
ENO_ECOSE	8.005e-52	57.71	Enolase OS=Escherichia coli (strain SE11) GN=eno P...	[more]
ENO_ECOLU	8.005e-52	57.71	Enolase OS=Escherichia coli O17:K52:H18 (strain UM...	[more]
ENO_ECOLI	8.005e-52	57.71	Enolase OS=Escherichia coli (strain K12) GN=eno PE...	[more]
ENO_ECOLC	8.005e-52	57.71	Enolase OS=Escherichia coli (strain ATCC 8739 / DS...	[more]
ENO_ECOL6	8.005e-52	57.71	Enolase OS=Escherichia coli O6 GN=eno PE=3 SV=2	[more]
ENO_ECOL5	8.005e-52	57.71	Enolase OS=Escherichia coli O6:K15:H31 (strain 536...	[more]
ENO_ECOK1	8.005e-52	57.71	Enolase OS=Escherichia coli O1:K1 / APEC GN=eno PE...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS06_0001H02_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H02, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN189180 ID=CN189180; Name=CN189180; organism=Citrus sinensis; type=EST; length=630bp
GAGGAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGC
AGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACA
TCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGG
AATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCA
AGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCA
CTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGT
ACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGC
TTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGT
GCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGG
TAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTG
GATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCT
GTAGGAGCTTCCTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATA
TCACCATCTGAACGCTGTGATTAAAAAGAA