CN189180

Overview
NameCN189180
Unique NameCN189180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_PSEA8 (Enolase OS=Pseudomonas aeruginosa (strain LESB58) GN=eno PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55
Identity = 115/201 (57.21%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +K R++ DSRGNPTVE DV   +G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD  +Q A+D+ M++ LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA +F EA++MG E++HHL AV+K
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILDNGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDAADQKALDHAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNFAEALRMGAEIFHHLKAVLK 198          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_PSEA7 (Enolase OS=Pseudomonas aeruginosa (strain PA7) GN=eno PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55
Identity = 115/201 (57.21%), Postives = 140/201 (69.65%), Query Frame = 2
Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  +K R++ DSRGNPTVE DV   +G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD  +Q A+D+ M++ LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA +F EA++MG E++HHL AV+K
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILDNGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDAADQKALDHAMIE-LDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNFAEALRMGAEIFHHLKAVLK 198          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_ACIAD (Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55
Identity = 116/201 (57.71%), Postives = 142/201 (70.65%), Query Frame = 2
Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIKK 628
            I  ++AR+I DSRGNPT+E DV  + G V RA  PSGASTG  EALELRDG  + YLGKGV  AV+NVN II  AL GK   EQ  IDN M++ LDGT N     K+KLGANA LAVSLA  +A A  KKIPL+++IA+L G   L +PVP  N+INGGSHA N + +QEFMI PVG +SF EA++ G E++H L +V+ K
Sbjct:    6 IVDIRAREILDSRGNPTIEADVILASGVVGRACAPSGASTGSREALELRDGDKARYLGKGVKTAVNNVNTIIRDALVGKSVFEQKDIDNTMIE-LDGTEN-----KEKLGANATLAVSLAAARAAADEKKIPLFQYIADLRGQTILTMPVPMMNIINGGSHADNNVDIQEFMIEPVGFTSFSEALRAGAEIFHSLKSVLNK 200          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO2_CANGA (Enolase 2 OS=Candida glabrata GN=ENO2 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55
Identity = 118/207 (57.00%), Postives = 150/207 (72.46%), Query Frame = 2
Query:   23 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIKK 628
            + ++ V AR ++DSRGNPTVEV++TT  G V R+ VPSGASTGI+EALE+RDG  S +LGKGV  AV NVN +I PA   A  D  +Q A+D+ ++  LDGT N     K KLGANAIL VS+A  +A A  K +PLY+H+A+LS +K    VLPVP  NV+NGGSHAG  LA+QEFMI P GA SF+EAM++G EVYH+L ++ KK
Sbjct:    1 MAVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGIHEALEMRDGDKSKWLGKGVENAVKNVNDVIAPAFVKANVDIKDQKAVDDLLLS-LDGTAN-----KSKLGANAILGVSMAAARAAAAEKNVPLYQHLADLSDSKTSPFVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKSFREAMRIGSEVYHNLKSLTKK 200          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_RHORB (Enolase OS=Rhodotorula rubra GN=ENO PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.010e-54
Identity = 121/207 (58.45%), Postives = 149/207 (71.98%), Query Frame = 2
Query:   23 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIKK 628
            + I+ + +R ++DSRGNPTVEV++TT  G   R+ VPSGASTG++EALELRDG  S +LGKGV KAV+NVN  I PAL  A  D  +Q  ID ++++ LDGT N     K KLGANAIL VSLA  KAGA  K +PLYKHIA++S  K    VLPVP  NV+NGGSHAG  LA QEFMI+P GA SF E +++G EVYHHL ++ KK
Sbjct:    1 MAISKIHSRYVYDSRGNPTVEVELTTEKG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLKAVANVNDTIAPALIEANIDVADQAKIDEFLLK-LDGTPN-----KAKLGANAILGVSLAAAKAGAAQKDVPLYKHIADISKAKEGKFVLPVPFQNVLNGGSHAGGDLAFQEFMIVPSGAPSFSEGLRIGSEVYHHLKSLTKK 200          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_PSYWF (Enolase OS=Psychrobacter sp. (strain PRwf-1) GN=eno PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.320e-54
Identity = 113/203 (55.67%), Postives = 145/203 (71.43%), Query Frame = 2
Query:   20 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            A+ I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S YLGKGV+KAV+NVN+ I  AL   D T+Q  IDN +++ LDGT N     K  LGANA+LAVSLA  KA A  + +PL+++IA L G  +L +PVP  N++NGG HA N + +QEFMI P G SSF EA++ GVE++H L +V+K
Sbjct:    9 AVEIQDIRAREILDSRGNPTIEADVILADGSMGRAAAPSGASTGSREALELRDGDKSRYLGKGVTKAVANVNSQIRSALLESDATDQQGIDNILIE-LDGTAN-----KDHLGANAMLAVSLATAKAAAISQNLPLHQYIANLRGQTSLTMPVPMMNILNGGEHADNTVDIQEFMIEPTGFSSFSEALRAGVEIFHSLKSVLK 205          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_CARHZ (Enolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=eno PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.723e-54
Identity = 115/200 (57.50%), Postives = 142/200 (71.00%), Query Frame = 2
Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  V AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRD     YLGKGV++AV NVN+IIGP + G D  +Q  ID Y+++ LDGT N     K KLGANAIL VS+AV KA A+   +PLY++   L G    VLP P  N++NGG HA N + +QEFMI+P+GASSF EA++MG EV+H+L  V+K
Sbjct:    4 IREVIAREILDSRGNPTVEVDVILEDGTWGRAAVPSGASTGAFEAVELRDNDPQRYLGKGVTQAVENVNSIIGPEILGFDALDQVGIDEYLIE-LDGTPN-----KGKLGANAILGVSMAVAKAAANYLGLPLYRY---LGGTNARVLPAPMMNILNGGKHADNNVDIQEFMIMPLGASSFSEALRMGAEVFHNLKKVLK 194          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_PSYCK (Enolase OS=Psychrobacter cryohalolentis (strain K5) GN=eno PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.251e-54
Identity = 115/200 (57.50%), Postives = 143/200 (71.50%), Query Frame = 2
Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S Y+GKGV KAV+NVN+ I  AL  KD T Q AID+ M+  LDGT N     K  LGANAILAVSLAV KA A  + +PL+++IA+L    +L +PVP  N+INGG HA N + +QEFMI PVG SSF EA++ G E++H L +V+K
Sbjct:   12 IKDIRAREILDSRGNPTIEADVILADGTIGRAAAPSGASTGSREALELRDGDQSRYMGKGVKKAVANVNSQIRSALMDKDVTAQQAIDDAMIA-LDGTEN-----KDNLGANAILAVSLAVAKAAAKSQSLPLHQYIADLRNQTSLTMPVPMMNIINGGEHADNTVDIQEFMIEPVGFSSFSEALRAGTEIFHSLKSVLK 205          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_GEOSW (Enolase OS=Geobacillus sp. (strain WCH70) GN=eno PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.940e-54
Identity = 116/201 (57.71%), Postives = 143/201 (71.14%), Query Frame = 2
Query:   29 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIKK 628
            I  V AR++ DSRGNPTVEV+V T DG   RA VPSGASTG YEA+ELRDG  S YLGKGV KAV NVN II PA+ G + T+Q  ID  +++ LDGT N     K KLGANAIL VSLAV +A A    +PLY++   L G     LPVP  N++NGG+HA N + +QEFMI+PVGA SF+EA++MG E++H L AV+K+
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTEDGGFGRALVPSGASTGEYEAVELRDGDKSRYLGKGVLKAVENVNEIIAPAIIGFEVTDQVGIDKTLIE-LDGTEN-----KSKLGANAILGVSLAVARAAADELDMPLYQY---LGGFNAKTLPVPMMNILNGGAHADNNVDIQEFMIMPVGAKSFREALRMGAEIFHSLKAVLKE 195          
BLAST of CN189180 vs. ExPASy Swiss-Prot
Match: ENO_CALS8 (Enolase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=eno PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.940e-54
Identity = 114/205 (55.61%), Postives = 144/205 (70.24%), Query Frame = 2
Query:   14 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLNAVIK 625
            K+ ++ITAVKAR+I DSRGNPTVEV+V  +D  V RAAVPSGASTG++EA+ELRDG    Y+GKGV KAV NVN +I P + G +   Q  ID  M+ +LDGT N     K KLGANAIL VSLAV KA A+   +PLY++I  ++      LPVP  N++NGG HA N + +QEFMI+PVGA SF EA++M  E +H L  V+K
Sbjct:    2 KVDLSITAVKAREILDSRGNPTVEVEVVVNDEFVGRAAVPSGASTGMFEAVELRDGDKKRYMGKGVLKAVENVNEVIAPEIIGMNALNQVEIDRLMI-ELDGTEN-----KSKLGANAILGVSLAVAKAAANALGLPLYQYIGGVNAK---YLPVPMMNILNGGKHADNSVDLQEFMIMPVGAKSFSEALRMCAETFHQLRNVLK 197          
The following BLAST results are available for this feature:
BLAST of CN189180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_PSEA87.736e-5557.21Enolase OS=Pseudomonas aeruginosa (strain LESB58) ... [more]
ENO_PSEA77.736e-5557.21Enolase OS=Pseudomonas aeruginosa (strain PA7) GN=... [more]
ENO_ACIAD7.736e-5557.71Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno ... [more]
ENO2_CANGA7.736e-5557.00Enolase 2 OS=Candida glabrata GN=ENO2 PE=3 SV=1[more]
ENO_RHORB1.010e-5458.45Enolase OS=Rhodotorula rubra GN=ENO PE=1 SV=1[more]
ENO_PSYWF1.320e-5455.67Enolase OS=Psychrobacter sp. (strain PRwf-1) GN=en... [more]
ENO_CARHZ1.723e-5457.50Enolase OS=Carboxydothermus hydrogenoformans (stra... [more]
ENO_PSYCK2.251e-5457.50Enolase OS=Psychrobacter cryohalolentis (strain K5... [more]
ENO_GEOSW2.940e-5457.71Enolase OS=Geobacillus sp. (strain WCH70) GN=eno P... [more]
ENO_CALS82.940e-5455.61Enolase OS=Caldicellulosiruptor saccharolyticus (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0001H02_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189180 ID=CN189180; Name=CN189180; organism=Citrus sinensis; type=EST; length=630bp
GAGGAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGC
AGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACA
TCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGG
AATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCA
AGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCA
CTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGT
ACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGC
TTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGT
GCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGG
TAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTG
GATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCT
GTAGGAGCTTCCTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATA
TCACCATCTGAACGCTGTGATTAAAAAGAA
back to top