CN189178

Overview
NameCN189178
Unique NameCN189178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189178_ssr18 microsatellite CN189178_ssr18:18..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:19..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_PYRAB (Enolase OS=Pyrococcus abyssi GN=eno PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 4.032e-41
Identity = 100/165 (60.61%), Postives = 113/165 (68.48%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 572
            I AV AR+I DSRGNPTVEVDV T    + RAAVPSGASTG +EA+ELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  ++ +LDGT N     K  LGANAILAVSLAV KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN L
Sbjct:    7 IVAVIAREILDSRGNPTVEVDVHTPIS-MGRAAVPSGASTGTHEAVELRDGGKRYHGKGVRRAVENVNKIIAPELVGMDVRWQREIDRLLI-ELDGTEN-----KSNLGANAILAVSLAVAKAAANALELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNDL 161          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_EMENI (Enolase OS=Emericella nidulans GN=enoA PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.032e-41
Identity = 100/170 (58.82%), Postives = 120/170 (70.59%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLA 575
            I+ + AR ++DSRGNPTVEVDV T  G + RA VPSGASTG +EA ELRDG  S +LGKGV  AV NVN  IGPA+  +  D  EQ+ ID ++  +LDGT N     K  LGANAIL VSLA+ KAGA  K +PLY HI++L+G K   VLPVP  NV+NGGSHAG +LA
Sbjct:    3 ISKIHARSVYDSRGNPTVEVDVVTETG-LHRAIVPSGASTGQHEAHELRDGDKSKWLGKGVLTAVKNVNETIGPAVIKENLDVKEQSKIDEFL-NKLDGTPN-----KSNLGANAILGVSLAIAKAGAAEKGVPLYAHISDLAGTKKPYVLPVPFQNVLNGGSHAGGRLA 165          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_BACP2 (Enolase OS=Bacillus pumilus (strain SAFR-032) GN=eno PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.032e-41
Identity = 96/166 (57.83%), Postives = 113/166 (68.07%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 572
            I  V AR++ DSRGNPTVEV+V T  G   RA VPSGASTG YEA+ELRDG  D YLGKGV  AV+NVN II P L G D TEQ AID  ++ +LDGT N     K KLGANAIL VS+AV +A A   +IPLY++   L G  +  LPVP  N++NGG HA N +
Sbjct:    4 IVDVYAREVLDSRGNPTVEVEVYTESGGFGRALVPSGASTGEYEAVELRDGDKDRYLGKGVLTAVNNVNEIIAPELLGFDVTEQVAIDKMLI-ELDGTEN-----KGKLGANAILGVSIAVARAAADFLQIPLYQY---LGGFNSKTLPVPMMNIVNGGEHADNNV 160          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_PSEPK (Enolase OS=Pseudomonas putida (strain KT2440) GN=eno PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.265e-41
Identity = 94/167 (56.29%), Postives = 112/167 (67.07%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKL 572
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKDP++Q A+D  M+ +LDGT N     K KLGANAILAVSLA  KA A  + +PLY HIA L+G      +PVP  N+INGG HA N +
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDPSDQKALDRAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGQYSMPVPMMNIINGGEHADNNV 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_PSEPG (Enolase OS=Pseudomonas putida (strain GB-1) GN=eno PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.265e-41
Identity = 94/167 (56.29%), Postives = 112/167 (67.07%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKL 572
            I  +K R++ DSRGNPTVE DV   +G +  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKDP++Q A+D  M+ +LDGT N     K KLGANAILAVSLA  KA A  + +PLY HIA L+G      +PVP  N+INGG HA N +
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVLLDNGIIGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRELLLGKDPSDQKALDRAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQDQDLPLYAHIANLNGTPGQYSMPVPMMNIINGGEHADNNV 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_DESAD (Enolase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=eno PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.265e-41
Identity = 95/167 (56.89%), Postives = 116/167 (69.46%), Query Frame = 3
Query:   75 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 572
            TITAV AR+I DSRGNPTVEV+V    G   RAAVPSGASTG  EALELRDG  D Y GKGV  AV+NV   I  AL G+D   Q  IDN ++ +LDGT N     K++LGANA+L VS+AV +AGA++  IPLY+++  ++G    +LPVP  N+INGG HA N L
Sbjct:    3 TITAVWAREILDSRGNPTVEVEVVLESGATGRAAVPSGASTGTREALELRDGDKDRYKGKGVQVAVANVREEIAEALVGQDALRQVNIDNILI-ELDGTEN-----KERLGANAMLGVSMAVARAGANLLGIPLYQYLGGVNGK---LLPVPLMNIINGGEHAPNNL 160          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_CARHZ (Enolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=eno PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.265e-41
Identity = 94/166 (56.63%), Postives = 113/166 (68.07%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 572
            I  V AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRD     YLGKGV++AV NVN+IIGP + G D  +Q  ID Y++ +LDGT N     K KLGANAIL VS+AV KA A+   +PLY++   L G    VLP P  N++NGG HA N +
Sbjct:    4 IREVIAREILDSRGNPTVEVDVILEDGTWGRAAVPSGASTGAFEAVELRDNDPQRYLGKGVTQAVENVNSIIGPEILGFDALDQVGIDEYLI-ELDGTPN-----KGKLGANAILGVSMAVAKAAANYLGLPLYRY---LGGTNARVLPAPMMNILNGGKHADNNV 160          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_BACHD (Enolase OS=Bacillus halodurans GN=eno PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.877e-41
Identity = 91/165 (55.15%), Postives = 112/165 (67.88%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 572
            IT V AR++ DSRGNPTVEV+V    G + RA VPSGASTG YEA+ELRDGG  +LGKGV KAV NVN +I P L G D  +Q  ID +M+ +LDGT N     K KLGANAIL VS+AV +A A+   +PLY ++   +  +   LPVP  N+INGG HA N +
Sbjct:    4 ITDVYAREVLDSRGNPTVEVEVYLESGAMGRALVPSGASTGEYEAVELRDGGERFLGKGVLKAVENVNEVIAPELIGFDALDQIGIDQHMI-ELDGTEN-----KGKLGANAILGVSMAVARAAANALDLPLYVYLGGFNAKQ---LPVPMMNIINGGEHADNNV 159          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_ASPFU (Enolase OS=Aspergillus fumigatus GN=enoA PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 6.877e-41
Identity = 99/170 (58.24%), Postives = 120/170 (70.59%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLA 575
            I+ + AR ++DSRGNPTVEVDV T  G + RA VPSGASTG +EA ELRDG  + + GKGV KAV NVN  IGPAL  +  D  +Q+ +D ++  +LDGT N     K  LGANAIL VSLAV KAGA  K +PLY HI++L+G K   VLPVP  NV+NGGSHAG +LA
Sbjct:    3 ISKIHARSVYDSRGNPTVEVDVVTETG-LHRAIVPSGASTGQHEAHELRDGDKTQWGGKGVLKAVKNVNETIGPALIKENIDVKDQSKVDEFL-NKLDGTAN-----KSNLGANAILGVSLAVAKAGAAEKGVPLYAHISDLAGTKKPYVLPVPFQNVLNGGSHAGGRLA 165          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_PSEHT (Enolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=eno PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 8.981e-41
Identity = 96/167 (57.49%), Postives = 114/167 (68.26%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKL 572
            I  V  R+I DSRGNPTVE DV  +DG   RAA PSGASTG  EALELRDG  S YLGKGV KAV  +N  I  ALAG++  EQ+ +D  M+  LDGT N     K+KLGANAILAVSLA  KA A  KK+ LY+HIA+L+G   +  +P+P  N+INGG HA N +
Sbjct:    4 IVKVIGREIMDSRGNPTVEADVHLADGSWGRAAAPSGASTGTREALELRDGDKSRYLGKGVLKAVGFINNEIATALAGQNALEQSTVDQVML-DLDGTEN-----KEKLGANAILAVSLATAKAAAQSKKVELYEHIADLNGTPGVYSMPLPMMNIINGGEHADNSV 164          
The following BLAST results are available for this feature:
BLAST of CN189178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_PYRAB4.032e-4160.61Enolase OS=Pyrococcus abyssi GN=eno PE=3 SV=2[more]
ENO_EMENI4.032e-4158.82Enolase OS=Emericella nidulans GN=enoA PE=1 SV=1[more]
ENO_BACP24.032e-4157.83Enolase OS=Bacillus pumilus (strain SAFR-032) GN=e... [more]
ENO_PSEPK5.265e-4156.29Enolase OS=Pseudomonas putida (strain KT2440) GN=e... [more]
ENO_PSEPG5.265e-4156.29Enolase OS=Pseudomonas putida (strain GB-1) GN=eno... [more]
ENO_DESAD5.265e-4156.89Enolase OS=Desulfovibrio salexigens (strain ATCC 1... [more]
ENO_CARHZ5.265e-4156.63Enolase OS=Carboxydothermus hydrogenoformans (stra... [more]
ENO_BACHD6.877e-4155.15Enolase OS=Bacillus halodurans GN=eno PE=3 SV=1[more]
ENO_ASPFU6.877e-4158.24Enolase OS=Aspergillus fumigatus GN=enoA PE=1 SV=3[more]
ENO_PSEHT8.981e-4157.49Enolase OS=Pseudoalteromonas haloplanktis (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189178 ID=CN189178; Name=CN189178; organism=Citrus sinensis; type=EST; length=576bp
CTGTTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGGTTT
TCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCA
GATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACAT
CAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGA
ATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAA
GGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCAC
TCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTA
CAACAACTTGATGGAACTGTGAATGAGTGGGGTTGGTGCAAACAGAAGCT
TGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTG
CACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGT
AACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGG
ATCACATGCTGGAAACAAACTTGCTA
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