CN189178

Overview
NameCN189178
Unique NameCN189178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189178_ssr18 microsatellite CN189178_ssr18:18..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:19..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_MACFA (Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.929e-51
Identity = 113/171 (66.08%), Postives = 131/171 (76.61%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  V AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKVHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_PONAB (Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.519e-51
Identity = 112/171 (65.50%), Postives = 131/171 (76.61%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_HUMAN (Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 2.519e-51
Identity = 112/171 (65.50%), Postives = 131/171 (76.61%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  + TEQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLFTSKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOG_RAT (Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 5.613e-51
Identity = 112/171 (65.50%), Postives = 132/171 (77.19%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+I DSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRDG    YLGKGV KAV ++N+ I PAL  +G    EQ  +DN M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +L+LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSIQKIWAREILDSRGNPTVEVDLHTAKG-LFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSGLSVVEQEKLDNLMLE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_CUNEL (Enolase (Fragment) OS=Cunninghamella elegans PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.330e-51
Identity = 117/171 (68.42%), Postives = 131/171 (76.61%), Query Frame = 3
Query:   75 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDG-GSDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLA 575
            TIT V ARQIFDSRGNPTVEV+VTT  G V RA VPSGASTG++EALELRDG  SDYLGKGV KAV NVN II   L  A     +Q A+D++++Q LDGT N     K+KLGANAIL VSLAV KAGA  K +P Y HIA+L+G+K   VLPVPAFNVINGGSHAGNKLA
Sbjct:    2 TITKVHARQIFDSRGNPTVEVEVTTDKG-VFRAGVPSGASTGVHEALELRDGVKSDYLGKGVLKAVGNVNTIINEELVKANLSVVDQKAVDDFLIQ-LDGTEN-----KEKLGANAILGVSLAVAKAGAAEKGVPFYVHIADLAGSKKPFVLPVPAFNVINGGSHAGNKLA 165          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOG_HUMAN (Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3)

HSP 1 Score: 199.904 bits (507), Expect = 7.330e-51
Identity = 111/171 (64.91%), Postives = 133/171 (77.78%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+I DSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRDG    YLGKGV KAV ++N+ I PAL  +G    EQ  +DN M++ LDGT N     K K GANAIL VSLAVCKAGA  +++PLY+HIA+L+GN +L+LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSIEKIWAREILDSRGNPTVEVDLYTAKG-LFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSGLSVVEQEKLDNLMLE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_PYTRG (Alpha-enolase OS=Python regius PE=2 SV=3)

HSP 1 Score: 199.904 bits (507), Expect = 7.330e-51
Identity = 111/171 (64.91%), Postives = 132/171 (77.19%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  ++AR+IFDSRGNPT+EVD+ T  G + RAAVPSGASTGIYEALELRD     +LGKGVSKAV +VN  I PAL  K+ +  EQ  ID  M++ +DG+ N     K K GANAIL VSLAVCKAGA  K IPLY+HIA+L+GNK ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKIQAREIFDSRGNPTIEVDLYTKKG-LFRAAVPSGASTGIYEALELRDNDKTRFLGKGVSKAVEHVNKTIAPALVNKNVSVVEQEKIDKLMIE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKDIPLYRHIADLAGNKEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOB_HUMAN (Beta-enolase OS=Homo sapiens GN=ENO3 PE=1 SV=4)

HSP 1 Score: 199.519 bits (506), Expect = 9.574e-51
Identity = 110/164 (67.07%), Postives = 127/164 (77.44%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG    YLGKGV KAV N+N+ +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +L+LPVPAFNVINGGSHAGNKLA
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKGRYLGKGVLKAVENINSTLGPALLQKKLSVADQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_SCHMA (Enolase OS=Schistosoma mansoni GN=ENO PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 112/171 (65.50%), Postives = 133/171 (77.78%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + ARQIFDSRGNPTVEVD+ TS G + RAAVPSGASTG++EALELRD  S  Y+ KGV  AVSNVN II PAL  K+   T Q AID YM+  LDGT N     K+KLGANAIL VSLAVCKAGA    +PLY++IA L+G++++++PVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILTIHARQIFDSRGNPTVEVDLKTSKG-LFRAAVPSGASTGVHEALELRDTNSKAYMKKGVLTAVSNVNKIIAPALINKNIPVTNQAAIDKYMID-LDGTEN-----KEKLGANAILGVSLAVCKAGAAEAGLPLYRYIARLAGHEDVIMPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOB_RAT (Beta-enolase OS=Rattus norvegicus GN=Eno3 PE=1 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 111/164 (67.68%), Postives = 127/164 (77.44%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLA
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLA 164          
The following BLAST results are available for this feature:
BLAST of CN189178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENOA_MACFA1.929e-5166.08Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 ... [more]
ENOA_PONAB2.519e-5165.50Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1[more]
ENOA_HUMAN2.519e-5165.50Alpha-enolase OS=Homo sapiens GN=ENO1 PE=1 SV=2[more]
ENOG_RAT5.613e-5165.50Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV... [more]
ENO_CUNEL7.330e-5168.42Enolase (Fragment) OS=Cunninghamella elegans PE=2 ... [more]
ENOG_HUMAN7.330e-5164.91Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3[more]
ENOA_PYTRG7.330e-5164.91Alpha-enolase OS=Python regius PE=2 SV=3[more]
ENOB_HUMAN9.574e-5167.07Beta-enolase OS=Homo sapiens GN=ENO3 PE=1 SV=4[more]
ENO_SCHMA2.133e-5065.50Enolase OS=Schistosoma mansoni GN=ENO PE=2 SV=1[more]
ENOB_RAT2.133e-5067.68Beta-enolase OS=Rattus norvegicus GN=Eno3 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189178 ID=CN189178; Name=CN189178; organism=Citrus sinensis; type=EST; length=576bp
CTGTTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGGTTT
TCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCA
GATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACAT
CAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGA
ATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAA
GGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCAC
TCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTA
CAACAACTTGATGGAACTGTGAATGAGTGGGGTTGGTGCAAACAGAAGCT
TGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTG
CACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGT
AACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGG
ATCACATGCTGGAAACAAACTTGCTA
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