CN189178

Overview
NameCN189178
Unique NameCN189178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189178_ssr18 microsatellite CN189178_ssr18:18..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:19..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOB_RABIT (Beta-enolase OS=Oryctolagus cuniculus GN=ENO3 PE=1 SV=4)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 111/164 (67.68%), Postives = 127/164 (77.44%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLA
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNHDLVLPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOB_PIG (Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 111/164 (67.68%), Postives = 127/164 (77.44%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLA
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_CHICK (Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 112/171 (65.50%), Postives = 130/171 (76.02%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     YLGKGVSKAV +VN  I PAL  K+    EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTNKG-LFRAAVPSGASTGIYEALELRDNDKTRYLGKGVSKAVEHVNKTIAPALISKNVNVVEQEKIDKLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_BOVIN (Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4)

HSP 1 Score: 198.364 bits (503), Expect = 2.133e-50
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  V AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K  +  EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKVHAREIFDSRGNPTVEVDLFTAKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVVEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNAEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOG_MOUSE (Gamma-enolase OS=Mus musculus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 2.786e-50
Identity = 111/171 (64.91%), Postives = 132/171 (77.19%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+I DSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRDG    YLGKGV KAV ++N+ I PAL  +G    EQ  +DN M++ LDGT N     K K GANAIL VSLAVCKAGA  + +PLY+HIA+L+GN +L+LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSIEKIWAREILDSRGNPTVEVDLYTAKG-LFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSRIAPALISSGISVVEQEKLDNLMLE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAERDLPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOB_BOVIN (Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.638e-50
Identity = 110/164 (67.07%), Postives = 126/164 (76.83%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  S YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  L+LPVPAFNVINGGSHAGNKLA
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKSRYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPELILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_SCEUN (Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 3.638e-50
Identity = 111/171 (64.91%), Postives = 132/171 (77.19%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     +LGKGVSKAV +VN  I PAL  K  +  EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN++++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKLHAREIFDSRGNPTVEVDLYTNKG-LFRAAVPSGASTGIYEALELRDNDKTRFLGKGVSKAVEHVNKTIAPALVNKKVNVVEQEKIDKLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNEDVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOB_MOUSE (Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 4.751e-50
Identity = 110/164 (67.07%), Postives = 127/164 (77.44%), Query Frame = 3
Query:   93 ARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            AR+I DSRGNPTVEVD+ T+ G   RAAVPSGASTGIYEALELRDG  + YLGKGV KAV ++N  +GPAL  K     +Q  +D +M++ LDGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +LVLPVPAFNVINGGSHAGNKLA
Sbjct:    8 AREILDSRGNPTVEVDLHTAKGRF-RAAVPSGASTGIYEALELRDGDKARYLGKGVLKAVEHINKTLGPALLEKKLSVVDQEKVDKFMIE-LDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPDLVLPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_RAT (Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV=4)

HSP 1 Score: 196.438 bits (498), Expect = 8.105e-50
Identity = 109/171 (63.74%), Postives = 130/171 (76.02%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     ++GKGVSKAV ++N  I PAL  K  +  EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTAKG-LFRAAVPSGASTGIYEALELRDNDKTRFMGKGVSKAVEHINKTIAPALVSKKLNVVEQEKIDQLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_ALLMI (Alpha-enolase OS=Alligator mississippiensis PE=2 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.058e-49
Identity = 110/171 (64.33%), Postives = 132/171 (77.19%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     ++GKGVSKAV++VN  I PAL  K+ +  EQ  ID  M++ +DG+ N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTSKG-LFRAAVPSGASTGIYEALELRDNDKTRFMGKGVSKAVAHVNKTIAPALISKNISVVEQEKIDRLMLE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLA 164          
The following BLAST results are available for this feature:
BLAST of CN189178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENOB_RABIT2.133e-5067.68Beta-enolase OS=Oryctolagus cuniculus GN=ENO3 PE=1... [more]
ENOB_PIG2.133e-5067.68Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1[more]
ENOA_CHICK2.133e-5065.50Alpha-enolase OS=Gallus gallus GN=ENO1 PE=2 SV=2[more]
ENOA_BOVIN2.133e-5064.91Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4[more]
ENOG_MOUSE2.786e-5064.91Gamma-enolase OS=Mus musculus GN=Eno2 PE=1 SV=2[more]
ENOB_BOVIN3.638e-5067.07Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1[more]
ENOA_SCEUN3.638e-5064.91Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3[more]
ENOB_MOUSE4.751e-5067.07Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3[more]
ENOA_RAT8.105e-5063.74Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV... [more]
ENOA_ALLMI1.058e-4964.33Alpha-enolase OS=Alligator mississippiensis PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189178 ID=CN189178; Name=CN189178; organism=Citrus sinensis; type=EST; length=576bp
CTGTTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGGTTT
TCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCA
GATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACAT
CAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGA
ATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAA
GGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCAC
TCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTA
CAACAACTTGATGGAACTGTGAATGAGTGGGGTTGGTGCAAACAGAAGCT
TGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTG
CACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGT
AACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGG
ATCACATGCTGGAAACAAACTTGCTA
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